AT1G78570 : ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 1
Query Information
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AGICode AT1G78570
Description rhamnose biosynthesis 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 1 0.31 -0.31
2 AT1G06000 UDP-Glycosyltransferase superfamily protein 0.86 0.3 -0.3
3 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.78 0.32 -0.3
4 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 0.77 0.32 -0.31
5 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 -0.77 0.31 -0.31
6 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 -0.76 0.33 -0.31
7 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 0.75 0.32 -0.29
8 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 0.74 0.31 -0.29
9 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 0.73 0.3 -0.3
10 AT3G09540 Pectin lyase-like superfamily protein 0.72 0.29 -0.32
11 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 0.72 0.32 -0.32
12 AT3G50880 DNA glycosylase superfamily protein -0.72 0.33 -0.31
13 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.72 0.32 -0.33
14 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.71 0.33 -0.3
15 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.7 0.33 -0.33
16 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.32 -0.31
17 AT1G56280 drought-induced 19 drought-induced 19,
drought-induced 19		 -0.7 0.35 -0.31
18 AT1G23390 Kelch repeat-containing F-box family protein -0.7 0.32 -0.3
19 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.32 -0.3
20 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.7 0.33 -0.31
21 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.7 0.31 -0.3
22 AT3G06850 2-oxoacid dehydrogenases acyltransferase family protein BCE2, DARK INDUCIBLE 3, LTA1 -0.69 0.31 -0.3
23 AT1G54740 Protein of unknown function (DUF3049) -0.69 0.34 -0.31
24 AT4G28480 DNAJ heat shock family protein 0.69 0.29 -0.31
25 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.69 0.31 -0.31
26 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.69 0.33 -0.31
27 AT5G47720 Thiolase family protein -0.68 0.3 -0.31
28 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.68 0.31 -0.3
29 AT4G01330 Protein kinase superfamily protein -0.68 0.32 -0.31
30 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA -0.68 0.3 -0.33
31 AT2G20670 Protein of unknown function (DUF506) -0.67 0.31 -0.34
32 AT2G38820 Protein of unknown function (DUF506) -0.67 0.32 -0.32
33 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 0.67 0.31 -0.31
34 AT5G15470 galacturonosyltransferase 14 galacturonosyltransferase 14 0.67 0.34 -0.32
35 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF 0.67 0.32 -0.3
36 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 0.67 0.32 -0.33
37 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.67 0.34 -0.31
38 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 0.67 0.33 -0.3
39 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich -0.67 0.32 -0.32
40 AT2G38290 ammonium transporter 2 ammonium transporter 2, AMMONIUM
TRANSPORTER 2;1, ammonium
transporter 2		 0.67 0.32 -0.32
41 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.3 -0.32
42 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.66 0.3 -0.33
43 AT4G02610 Aldolase-type TIM barrel family protein -0.66 0.34 -0.32
44 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.66 0.31 -0.32
45 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.66 0.3 -0.34
46 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.66 0.3 -0.32
47 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 0.66 0.31 -0.32
48 AT5G63190 MA3 domain-containing protein -0.66 0.31 -0.31
49 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein -0.65 0.32 -0.3
50 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.65 0.32 -0.29
51 AT3G09440 Heat shock protein 70 (Hsp 70) family protein 0.65 0.32 -0.32
52 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 0.65 0.33 -0.33
53 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.65 0.31 -0.3
54 AT5G03230 Protein of unknown function, DUF584 -0.65 0.32 -0.31
55 AT1G65560 Zinc-binding dehydrogenase family protein 0.65 0.33 -0.3
56 AT3G55580 Regulator of chromosome condensation (RCC1) family protein 0.65 0.33 -0.31
57 AT5G05270 Chalcone-flavanone isomerase family protein 0.64 0.3 -0.34
58 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.64 0.32 -0.31
59 AT3G19800 Protein of unknown function (DUF177) -0.64 0.32 -0.31
60 AT3G23900 RNA recognition motif (RRM)-containing protein 0.64 0.31 -0.34
61 AT4G28240 Wound-responsive family protein -0.64 0.31 -0.32
62 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.64 0.3 -0.32
63 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 0.64 0.32 -0.32
64 AT1G18660 zinc finger (C3HC4-type RING finger) family protein 0.64 0.32 -0.35
65 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.64 0.32 -0.31
66 AT1G23860 RS-containing zinc finger protein 21 RS-containing zinc finger protein
21, RS-containing zinc finger
protein 21, RS-containing zinc
finger protein 21, SRZ-21, SRZ21		 -0.63 0.33 -0.32
67 AT4G12640 RNA recognition motif (RRM)-containing protein 0.63 0.3 -0.31
68 AT1G18900 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.33
69 AT1G30530 UDP-glucosyl transferase 78D1 UDP-glucosyl transferase 78D1 0.63 0.3 -0.32
70 AT2G39940 RNI-like superfamily protein CORONATINE INSENSITIVE 1 0.63 0.32 -0.35
71 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.63 0.33 -0.32
72 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 -0.63 0.32 -0.32
73 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 -0.63 0.3 -0.3
74 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 0.63 0.32 -0.3
75 AT4G15480 UDP-Glycosyltransferase superfamily protein UGT84A1 0.63 0.31 -0.33
76 AT3G26510 Octicosapeptide/Phox/Bem1p family protein -0.63 0.31 -0.31
77 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.33
78 AT5G38560 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 8, proline-rich
extensin-like receptor kinase 8		 0.63 0.34 -0.29
79 AT2G39570 ACT domain-containing protein ACT domain repeats 9 -0.63 0.3 -0.32
80 AT5G14500 aldose 1-epimerase family protein -0.63 0.32 -0.33
81 AT5G63770 diacylglycerol kinase 2 diacylglycerol kinase 2,
diacylglycerol kinase 2		 0.62 0.31 -0.31
82 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 0.62 0.31 -0.33
83 AT1G29260 peroxin 7 ARABIDOPSIS PEROXIN 7, peroxin 7 -0.62 0.29 -0.32
84 AT3G55940 Phosphoinositide-specific phospholipase C family protein 0.62 0.3 -0.3
85 AT2G40950 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP17 0.62 0.33 -0.31
86 AT5G40890 chloride channel A chloride channel A, ATCLCA,
chloride channel A, CHLORIDE
CHANNEL-A, CHLORIDE CHANNEL A		 -0.62 0.3 -0.33
87 AT5G60030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.62 0.32 -0.33
88 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 -0.62 0.3 -0.31
89 AT5G54520 Transducin/WD40 repeat-like superfamily protein -0.61 0.29 -0.3
90 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.61 0.31 -0.32
91 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.31 -0.32
92 AT1G55690 Sec14p-like phosphatidylinositol transfer family protein 0.61 0.32 -0.32
93 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 0.61 0.32 -0.34
94 AT1G70290 trehalose-6-phosphatase synthase S8 ATTPS8, ATTPSC,
trehalose-6-phosphatase synthase
S8		 -0.61 0.31 -0.32
95 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.33 -0.31
96 AT5G37550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.29 -0.34
97 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.33 -0.31
98 AT5G57655 xylose isomerase family protein -0.6 0.29 -0.32
99 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 -0.6 0.34 -0.31
100 AT3G06035 Glycoprotein membrane precursor GPI-anchored 0.6 0.3 -0.35
101 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.6 0.3 -0.31
102 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.59 0.3 -0.31
103 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.59 0.3 -0.29
104 AT3G61540 alpha/beta-Hydrolases superfamily protein -0.58 0.31 -0.31
105 AT3G09470 Major facilitator superfamily protein -0.58 0.33 -0.31
106 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.58 0.31 -0.32
107 AT5G53830 VQ motif-containing protein -0.58 0.33 -0.32
108 AT1G76560 CP12 domain-containing protein 3 CP12 domain-containing protein 3 -0.58 0.32 -0.34
109 AT1G71180 6-phosphogluconate dehydrogenase family protein -0.58 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.67 0.42 -0.49 C0093
111 C0207 Phosphatidylglycerol-34:5 - - - -0.6 0.46 -0.45