AT1G54130 : AT-RSH3
Query Information
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AGICode AT1G54130
Description RELA/SPOT homolog 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 1 0.35 -0.31
2 AT1G68820 Transmembrane Fragile-X-F-associated protein 0.87 0.32 -0.32
3 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.87 0.29 -0.3
4 AT3G45160 Putative membrane lipoprotein -0.86 0.3 -0.31
5 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.86 0.31 -0.33
6 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.85 0.32 -0.3
7 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.85 0.29 -0.32
8 AT3G55070 LisH/CRA/RING-U-box domains-containing protein 0.84 0.31 -0.33
9 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 0.84 0.3 -0.3
10 AT1G75850 VPS35 homolog B VPS35 homolog B 0.84 0.32 -0.34
11 AT4G11380 Adaptin family protein 0.83 0.33 -0.31
12 AT1G06430 FTSH protease 8 FTSH protease 8 0.83 0.3 -0.31
13 AT3G43230 RING/FYVE/PHD-type zinc finger family protein 0.83 0.3 -0.32
14 AT1G70480 Domain of unknown function (DUF220) 0.83 0.3 -0.32
15 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 maternal effect embryo arrest 55 0.83 0.29 -0.32
16 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein -0.82 0.3 -0.31
17 AT3G48760 DHHC-type zinc finger family protein 0.82 0.31 -0.31
18 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.82 0.31 -0.32
19 AT5G48800 Phototropic-responsive NPH3 family protein -0.82 0.29 -0.32
20 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.82 0.31 -0.33
21 AT3G05010 Protein of unknown function, transmembrane-40 0.82 0.33 -0.31
22 AT5G56190 Transducin/WD40 repeat-like superfamily protein 0.82 0.31 -0.32
23 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.82 0.33 -0.33
24 AT4G15470 Bax inhibitor-1 family protein 0.81 0.3 -0.36
25 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.81 0.33 -0.29
26 AT1G23060 BEST Arabidopsis thaliana protein match is: TPX2 (targeting
protein for Xklp2) protein family (TAIR:AT1G70950.1); Has
449 Blast hits to 419 proteins in 98 species: Archae - 0;
Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158;
Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).		 0.81 0.29 -0.29
27 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.81 0.32 -0.3
28 AT4G30490 AFG1-like ATPase family protein 0.81 0.33 -0.32
29 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44		 -0.81 0.31 -0.31
30 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 0.81 0.32 -0.3
31 AT1G51950 indole-3-acetic acid inducible 18 indole-3-acetic acid inducible 18 0.81 0.33 -0.31
32 AT2G06530 SNF7 family protein VPS2.1 0.81 0.33 -0.31
33 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 0.8 0.32 -0.33
34 AT5G15830 basic leucine-zipper 3 basic leucine-zipper 3, basic
leucine-zipper 3		 -0.8 0.32 -0.3
35 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 -0.8 0.34 -0.3
36 AT2G20920 Protein of unknown function (DUF3353) 0.8 0.3 -0.3
37 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 0.8 0.31 -0.31
38 AT4G22980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits
to 468 proteins in 130 species: Archae - 5; Bacteria - 23;
Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 0.8 0.31 -0.32
39 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.79 0.31 -0.31
40 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.79 0.31 -0.3
41 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 0.79 0.33 -0.34
42 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 -0.79 0.32 -0.33
43 AT5G43560 TRAF-like superfamily protein 0.79 0.31 -0.33
44 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.79 0.31 -0.33
45 AT5G11840 Protein of unknown function (DUF1230) 0.79 0.32 -0.3
46 AT3G59290 ENTH/VHS family protein 0.79 0.33 -0.33
47 AT3G24200 FAD/NAD(P)-binding oxidoreductase family protein 0.79 0.3 -0.3
48 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.79 0.32 -0.3
49 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.79 0.31 -0.32
50 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 0.78 0.3 -0.33
51 AT1G53050 Protein kinase superfamily protein 0.78 0.31 -0.33
52 AT1G26390 FAD-binding Berberine family protein 0.78 0.31 -0.29
53 AT5G03660 Family of unknown function (DUF662) 0.78 0.3 -0.3
54 AT4G05400 copper ion binding -0.78 0.32 -0.33
55 AT4G13550 triglyceride lipases;triglyceride lipases 0.78 0.3 -0.32
56 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.78 0.32 -0.31
57 AT5G66290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 7 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.78 0.3 -0.32
58 AT2G36570 Leucine-rich repeat protein kinase family protein -0.78 0.3 -0.32
59 AT3G25100 cell division cycle 45 cell division cycle 45 -0.78 0.32 -0.3
60 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 0.78 0.34 -0.32
61 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.78 0.34 -0.32
62 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II 0.78 0.31 -0.31
63 AT5G16730 Plant protein of unknown function (DUF827) 0.78 0.32 -0.31
64 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.77 0.31 -0.31
65 AT1G13790 XH/XS domain-containing protein factor of DNA methylation 4 -0.77 0.3 -0.3
66 AT1G23780 F-box family protein 0.77 0.31 -0.32
67 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.77 0.31 -0.3
68 AT3G18040 MAP kinase 9 MAP kinase 9 0.77 0.29 -0.33
69 AT5G09620 Octicosapeptide/Phox/Bem1p family protein 0.77 0.33 -0.31
70 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.77 0.29 -0.33
71 AT5G52890 AT hook motif-containing protein -0.76 0.31 -0.31
72 AT5G05570 transducin family protein / WD-40 repeat family protein 0.76 0.34 -0.31
73 AT5G19855 Chaperonin-like RbcX protein AtRbcX2, homologue of
cyanobacterial RbcX 2		 0.76 0.3 -0.32
74 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.76 0.31 -0.3
75 AT3G62820 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.76 0.3 -0.33
76 AT1G71950 Proteinase inhibitor, propeptide 0.76 0.31 -0.31
77 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.76 0.31 -0.34
78 AT5G65620 Zincin-like metalloproteases family protein 0.76 0.34 -0.31
79 AT3G44830 Lecithin:cholesterol acyltransferase family protein 0.76 0.32 -0.34
80 AT2G28250 Protein kinase superfamily protein NCRK -0.76 0.31 -0.31
81 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.76 0.28 -0.34
82 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.34 -0.31
83 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 0.76 0.31 -0.32
84 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 0.76 0.35 -0.31
85 AT1G28050 B-box type zinc finger protein with CCT domain 0.76 0.31 -0.3
86 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.31 -0.3
87 AT1G66230 myb domain protein 20 myb domain protein 20, myb domain
protein 20		 -0.75 0.29 -0.32
88 AT1G77770 Protein of unknown function (DUF1644) 0.75 0.33 -0.33
89 AT3G55910 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.75 0.32 -0.3
90 AT4G13730 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.75 0.31 -0.31
91 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 0.75 0.31 -0.31
92 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 -0.75 0.33 -0.31
93 AT1G80050 adenine phosphoribosyl transferase 2 adenine phosphoribosyl transferase
2, ATAPT2, PHT1.1		 -0.75 0.3 -0.33
94 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.75 0.33 -0.31
95 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 0.75 0.33 -0.33
96 AT3G02070 Cysteine proteinases superfamily protein 0.75 0.32 -0.32
97 AT4G34370 RING/U-box superfamily protein ARIADNE 1, ARABIDOPSIS ARIADNE 1 0.75 0.31 -0.31
98 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 0.75 0.32 -0.31
99 AT3G01560 Protein of unknown function (DUF1421) 0.75 0.3 -0.33
100 AT3G04480 endoribonucleases -0.75 0.31 -0.3
101 AT2G37570 HSP20-like chaperones superfamily protein sodium- and lithium-tolerant 1 0.75 0.33 -0.32
102 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.75 0.31 -0.33
103 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.75 0.33 -0.29
104 AT2G44380 Cysteine/Histidine-rich C1 domain family protein -0.75 0.34 -0.33
105 AT5G27280 Zim17-type zinc finger protein 0.75 0.3 -0.33
106 AT4G23460 Adaptin family protein 0.74 0.34 -0.3
107 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 0.74 0.32 -0.31
108 AT2G15320 Leucine-rich repeat (LRR) family protein 0.74 0.31 -0.3
109 AT1G04300 TRAF-like superfamily protein 0.74 0.31 -0.31
110 AT1G78210 alpha/beta-Hydrolases superfamily protein 0.74 0.29 -0.31
111 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 -0.74 0.32 -0.32
112 AT3G27400 Pectin lyase-like superfamily protein -0.74 0.33 -0.3
113 AT3G07580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48335.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.74 0.32 -0.32
114 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 0.74 0.31 -0.3
115 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.74 0.33 -0.31
116 AT1G27200 Domain of unknown function (DUF23) 0.74 0.3 -0.29
117 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 0.74 0.31 -0.34
118 AT1G77890 DNA-directed RNA polymerase II protein 0.74 0.31 -0.33
119 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.74 0.33 -0.34
120 AT5G15520 Ribosomal protein S19e family protein -0.73 0.31 -0.32
121 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 -0.73 0.33 -0.31
122 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
123 AT2G47790 Transducin/WD40 repeat-like superfamily protein -0.72 0.31 -0.33
124 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.72 0.31 -0.33
125 AT1G72230 Cupredoxin superfamily protein -0.72 0.31 -0.33
126 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.71 0.34 -0.3
127 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.71 0.32 -0.3
128 AT3G59480 pfkB-like carbohydrate kinase family protein -0.71 0.34 -0.31
129 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.71 0.33 -0.31
130 AT1G43040 SAUR-like auxin-responsive protein family -0.71 0.32 -0.3
131 AT1G80690 PPPDE putative thiol peptidase family protein -0.71 0.31 -0.3
132 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.71 0.35 -0.32
133 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.71 0.32 -0.32
134 AT4G11900 S-locus lectin protein kinase family protein -0.71 0.31 -0.33
135 AT3G63110 isopentenyltransferase 3 isopentenyltransferase 3,
isopentenyltransferase 3		 -0.71 0.31 -0.31
136 AT2G35605 SWIB/MDM2 domain superfamily protein -0.71 0.32 -0.32
137 AT4G32605 Mitochondrial glycoprotein family protein -0.71 0.32 -0.31
138 AT3G16650 Transducin/WD40 repeat-like superfamily protein -0.7 0.31 -0.33
139 AT4G34260 1,2-alpha-L-fucosidases ALTERED XYLOGLUCAN 8, FUC95A -0.7 0.29 -0.33
140 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.33 -0.32
141 AT3G44940 Protein of unknown function (DUF1635) -0.69 0.32 -0.31
142 AT2G37600 Ribosomal protein L36e family protein -0.69 0.32 -0.32
143 AT1G02690 importin alpha isoform 6 importin alpha isoform 6 -0.69 0.3 -0.31
144 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.69 0.33 -0.32
145 AT4G32800 Integrase-type DNA-binding superfamily protein -0.69 0.32 -0.3
146 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.69 0.29 -0.3
147 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 -0.69 0.32 -0.33
148 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.69 0.34 -0.3
149 AT1G33960 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AVRRPT2-INDUCED GENE 1 -0.68 0.31 -0.3
150 AT1G52300 Zinc-binding ribosomal protein family protein -0.68 0.32 -0.32
151 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.68 0.31 -0.32
152 AT5G60140 AP2/B3-like transcriptional factor family protein -0.68 0.3 -0.34
153 AT1G78750 F-box/RNI-like superfamily protein -0.68 0.3 -0.32
154 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 -0.68 0.34 -0.31