AT1G10590 : -
Query Information
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AGICode AT1G10590
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G10590 Nucleic acid-binding, OB-fold-like protein 1 0.32 -0.3
2 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.84 0.3 -0.29
3 AT2G44120 Ribosomal protein L30/L7 family protein 0.83 0.31 -0.32
4 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.83 0.3 -0.33
5 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.83 0.31 -0.29
6 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.82 0.3 -0.31
7 AT2G41840 Ribosomal protein S5 family protein 0.82 0.33 -0.32
8 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.81 0.33 -0.32
9 AT2G27720 60S acidic ribosomal protein family 0.81 0.32 -0.32
10 AT5G06360 Ribosomal protein S8e family protein 0.81 0.32 -0.34
11 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.81 0.33 -0.3
12 AT2G44510 CDK inhibitor P21 binding protein 0.81 0.33 -0.31
13 AT2G19740 Ribosomal protein L31e family protein 0.81 0.31 -0.31
14 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.8 0.33 -0.32
15 AT3G53740 Ribosomal protein L36e family protein 0.8 0.3 -0.34
16 AT5G02450 Ribosomal protein L36e family protein 0.8 0.32 -0.31
17 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.8 0.3 -0.31
18 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.79 0.31 -0.32
19 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 0.79 0.31 -0.31
20 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.32 -0.31
21 AT2G17360 Ribosomal protein S4 (RPS4A) family protein 0.79 0.33 -0.33
22 AT4G02230 Ribosomal protein L19e family protein 0.79 0.31 -0.31
23 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.79 0.3 -0.34
24 AT1G77750 Ribosomal protein S13/S18 family 0.79 0.31 -0.32
25 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.78 0.33 -0.32
26 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.32 -0.32
27 AT3G12370 Ribosomal protein L10 family protein 0.78 0.33 -0.3
28 AT3G24830 Ribosomal protein L13 family protein 0.77 0.31 -0.31
29 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.77 0.31 -0.32
30 AT2G36160 Ribosomal protein S11 family protein 0.77 0.32 -0.33
31 AT2G46230 PIN domain-like family protein 0.77 0.33 -0.33
32 AT5G65650 Protein of unknown function (DUF1195) 0.77 0.31 -0.3
33 AT1G25260 Ribosomal protein L10 family protein 0.77 0.33 -0.31
34 AT3G01790 Ribosomal protein L13 family protein 0.77 0.31 -0.3
35 AT1G20370 Pseudouridine synthase family protein 0.76 0.31 -0.3
36 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.76 0.3 -0.3
37 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.76 0.32 -0.31
38 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.76 0.31 -0.31
39 AT5G23290 prefoldin 5 prefoldin 5 0.76 0.32 -0.34
40 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.76 0.31 -0.32
41 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.76 0.36 -0.34
42 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.76 0.3 -0.3
43 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.76 0.32 -0.31
44 AT2G47640 Small nuclear ribonucleoprotein family protein 0.76 0.31 -0.3
45 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.76 0.32 -0.33
46 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.76 0.32 -0.32
47 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.76 0.33 -0.32
48 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.75 0.33 -0.29
49 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.32 -0.32
50 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.73 0.33 -0.31
51 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.73 0.29 -0.3
52 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.73 0.32 -0.31
53 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.72 0.29 -0.32
54 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.72 0.32 -0.34
55 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.32 -0.33
56 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.71 0.32 -0.31
57 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.71 0.31 -0.32
58 AT3G43220 Phosphoinositide phosphatase family protein -0.71 0.32 -0.31
59 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.7 0.29 -0.31
60 AT1G77800 PHD finger family protein -0.7 0.3 -0.35
61 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.7 0.33 -0.31
62 AT2G15530 RING/U-box superfamily protein -0.7 0.31 -0.3
63 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.69 0.31 -0.29
64 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.69 0.31 -0.32
65 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.3
66 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.68 0.31 -0.33
67 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 -0.68 0.33 -0.33
68 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 -0.68 0.3 -0.3
69 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.67 0.34 -0.32
70 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.67 0.35 -0.33
71 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.67 0.33 -0.31
72 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 -0.66 0.3 -0.35
73 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.66 0.32 -0.3
74 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 -0.66 0.31 -0.31
75 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 -0.65 0.33 -0.32
76 AT2G21340 MATE efflux family protein -0.65 0.33 -0.29
77 AT1G59640 BIG PETAL P BIG PETAL, BIG PETAL P, BIG PETAL
UB, ZCW32		 -0.65 0.33 -0.31
78 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.65 0.31 -0.31
79 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 -0.64 0.32 -0.3
80 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.64 0.3 -0.33
81 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.64 0.3 -0.3
82 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.64 0.3 -0.34
83 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 -0.63 0.32 -0.3
84 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 -0.63 0.32 -0.3
85 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.62 0.3 -0.34
86 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 -0.62 0.34 -0.33
87 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.62 0.3 -0.33
88 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 -0.62 0.32 -0.32
89 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.62 0.33 -0.28
90 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.62 0.34 -0.32
91 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.62 0.32 -0.33
92 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.62 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.81 0.42 -0.46
94 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.79 0.43 -0.44 C0210
95 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.68 0.32 -0.31 C0235
96 C0177 MST_2429.6 - - - -0.68 0.47 -0.42
97 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.63 0.3 -0.32 C0092