AGICode | AT1G10522 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G10522 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT2G04530 | Metallo-hydrolase/oxidoreductase superfamily protein | CPZ, TRNASE Z 2 | 0.92 | 0.31 | -0.31 | ||
3 | AT3G17170 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
REGULATOR OF FATTY-ACID COMPOSITION 3 |
0.92 | 0.33 | -0.32 | ||
4 | AT1G69200 | fructokinase-like 2 | fructokinase-like 2 | 0.92 | 0.29 | -0.31 | ||
5 | AT2G44640 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.9 | 0.31 | -0.3 | |||
6 | AT3G18680 | Amino acid kinase family protein | 0.9 | 0.34 | -0.35 | |||
7 | AT3G06730 | Thioredoxin z | thioredoxin putative plastidic, Thioredoxin z |
0.89 | 0.34 | -0.33 | ||
8 | AT1G36390 | Co-chaperone GrpE family protein | 0.89 | 0.31 | -0.33 | |||
9 | AT4G02990 | Mitochondrial transcription termination factor family protein |
BELAYA SMERT, RUGOSA 2 | 0.89 | 0.34 | -0.3 | ||
10 | AT1G11430 | plastid developmental protein DAG, putative | 0.89 | 0.31 | -0.3 | |||
11 | AT3G21300 | RNA methyltransferase family protein | 0.89 | 0.31 | -0.32 | |||
12 | AT1G21600 | plastid transcriptionally active 6 | plastid transcriptionally active 6 | 0.89 | 0.3 | -0.31 | ||
13 | AT1G56050 | GTP-binding protein-related | 0.88 | 0.32 | -0.29 | |||
14 | AT5G10910 | mraW methylase family protein | 0.88 | 0.32 | -0.3 | |||
15 | AT3G25660 | Amidase family protein | 0.88 | 0.35 | -0.3 | |||
16 | AT2G35155 | Trypsin family protein | 0.88 | 0.33 | -0.32 | |||
17 | AT5G62840 | Phosphoglycerate mutase family protein | 0.88 | 0.31 | -0.34 | |||
18 | AT3G53130 | Cytochrome P450 superfamily protein | CYTOCHROME P450 97C1, LUTEIN DEFICIENT 1 |
0.88 | 0.34 | -0.3 | ||
19 | AT2G30695 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). |
0.88 | 0.31 | -0.3 | |||
20 | AT2G24060 | Translation initiation factor 3 protein | 0.88 | 0.31 | -0.31 | |||
21 | AT1G53800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). |
0.88 | 0.32 | -0.31 | |||
22 | AT2G17972 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.88 | 0.3 | -0.34 | |||
23 | AT3G51140 | Protein of unknown function (DUF3353) | 0.88 | 0.33 | -0.32 | |||
24 | AT5G19620 | outer envelope protein of 80 kDa | ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA, EMBRYO DEFECTIVE 213, outer envelope protein of 80 kDa, translocon at the outer envelope membrane of chloroplasts 75-V |
0.88 | 0.32 | -0.32 | ||
25 | AT2G34640 | plastid transcriptionally active 12 | HEMERA, plastid transcriptionally active 12 |
0.87 | 0.31 | -0.32 | ||
26 | AT3G59040 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.87 | 0.32 | -0.32 | |||
27 | AT1G78180 | Mitochondrial substrate carrier family protein | 0.87 | 0.31 | -0.33 | |||
28 | AT5G23310 | Fe superoxide dismutase 3 | Fe superoxide dismutase 3 | 0.87 | 0.28 | -0.31 | ||
29 | AT2G02740 | ssDNA-binding transcriptional regulator | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 |
0.87 | 0.29 | -0.32 | ||
30 | AT1G02280 | translocon at the outer envelope membrane of chloroplasts 33 |
ATTOC33, PLASTID PROTEIN IMPORT 1, translocon at the outer envelope membrane of chloroplasts 33 |
0.87 | 0.3 | -0.3 | ||
31 | AT2G17240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). |
0.87 | 0.33 | -0.32 | |||
32 | AT1G70200 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.87 | 0.32 | -0.31 | |||
33 | AT2G33180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.87 | 0.3 | -0.31 | |||
34 | AT5G38290 | Peptidyl-tRNA hydrolase family protein | 0.87 | 0.31 | -0.31 | |||
35 | AT5G46580 | pentatricopeptide (PPR) repeat-containing protein | 0.87 | 0.3 | -0.33 | |||
36 | AT2G41990 | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.34 | -0.32 | |||
37 | AT5G20040 | isopentenyltransferase 9 | ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 9, isopentenyltransferase 9 |
0.86 | 0.3 | -0.31 | ||
38 | AT5G50280 | Pentatricopeptide repeat (PPR) superfamily protein | embryo defective 1006 | 0.86 | 0.31 | -0.3 | ||
39 | AT1G48460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.33 | -0.3 | |||
40 | AT5G57170 | Tautomerase/MIF superfamily protein | 0.86 | 0.33 | -0.3 | |||
41 | AT3G25860 | 2-oxoacid dehydrogenases acyltransferase family protein | LTA2, PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE |
0.86 | 0.32 | -0.32 | ||
42 | AT5G51100 | Fe superoxide dismutase 2 | Fe superoxide dismutase 2 | 0.86 | 0.31 | -0.31 | ||
43 | AT2G14880 | SWIB/MDM2 domain superfamily protein | 0.86 | 0.3 | -0.3 | |||
44 | AT2G41720 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 2654 | 0.85 | 0.32 | -0.31 | ||
45 | AT4G39120 | myo-inositol monophosphatase like 2 | HISTIDINE BIOSYNTHESIS 7, myo-inositol monophosphatase like 2 |
0.85 | 0.29 | -0.32 | ||
46 | AT1G26570 | UDP-glucose dehydrogenase 1 | UDP-GLUCOSE DEHYDROGENASE 1, UDP-glucose dehydrogenase 1 |
0.85 | 0.33 | -0.29 | ||
47 | AT1G17200 | Uncharacterised protein family (UPF0497) | 0.85 | 0.3 | -0.32 | |||
48 | AT5G48630 | Cyclin family protein | 0.85 | 0.3 | -0.33 | |||
49 | AT3G54090 | fructokinase-like 1 | fructokinase-like 1 | 0.85 | 0.31 | -0.31 | ||
50 | AT1G51100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.32 | -0.3 | |||
51 | AT3G14110 | Tetratricopeptide repeat (TPR)-like superfamily protein | FLUORESCENT IN BLUE LIGHT | 0.85 | 0.34 | -0.3 | ||
52 | AT5G22640 | MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein |
embryo defective 1211 | 0.85 | 0.33 | -0.32 | ||
53 | AT5G15390 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.85 | 0.32 | -0.31 | |||
54 | AT1G73090 | unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.32 | -0.31 | |||
55 | AT2G36230 | Aldolase-type TIM barrel family protein | ALBINO AND PALE GREEN 10, HISN3 | 0.84 | 0.32 | -0.31 | ||
56 | AT2G25840 | Nucleotidylyl transferase superfamily protein | ovule abortion 4 | 0.84 | 0.31 | -0.32 | ||
57 | AT2G39140 | pseudouridine synthase family protein | PIGMENT DEFECTIVE 328, SUPPRESSOR OF VARIEGATION 1 |
0.84 | 0.32 | -0.34 | ||
58 | AT4G20130 | plastid transcriptionally active 14 | plastid transcriptionally active 14 |
0.84 | 0.32 | -0.31 | ||
59 | AT3G51870 | Mitochondrial substrate carrier family protein | 0.84 | 0.32 | -0.32 | |||
60 | AT1G50000 | methyltransferases | 0.84 | 0.33 | -0.31 | |||
61 | AT2G15820 | endonucleases | ORGANELLE TRANSCRIPT PROCESSING 51 | 0.84 | 0.32 | -0.3 | ||
62 | AT2G42890 | MEI2-like 2 | MEI2-like 2, MEI2-like 2 | -0.84 | 0.33 | -0.33 | ||
63 | AT2G18990 | thioredoxin domain-containing protein 9 homolog | thioredoxin domain-containing protein 9 homolog |
0.84 | 0.31 | -0.3 | ||
64 | AT4G28210 | embryo defective 1923 | embryo defective 1923 | 0.84 | 0.32 | -0.32 | ||
65 | AT5G64580 | AAA-type ATPase family protein | EMBRYO DEFECTIVE 3144 | 0.84 | 0.32 | -0.32 | ||
66 | AT3G59840 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.31 | -0.3 | |||
67 | AT4G25990 | CCT motif family protein | CIL | 0.84 | 0.31 | -0.32 | ||
68 | AT1G50570 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.83 | 0.3 | -0.31 | |||
69 | AT3G46740 | translocon at the outer envelope membrane of chloroplasts 75-III |
MODIFIER OF ARG1 1, translocon at the outer envelope membrane of chloroplasts 75-III |
0.83 | 0.31 | -0.32 | ||
70 | AT5G23070 | Thymidine kinase | 0.83 | 0.3 | -0.31 | |||
71 | AT3G59980 | Nucleic acid-binding, OB-fold-like protein | 0.83 | 0.3 | -0.3 | |||
72 | AT5G57910 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.82 | 0.31 | -0.3 | |||
73 | AT1G63840 | RING/U-box superfamily protein | -0.82 | 0.32 | -0.33 | |||
74 | AT1G45145 | thioredoxin H-type 5 | THIOREDOXIN H-TYPE 5, thioredoxin H-type 5, LOCUS OF INSENSITIVITY TO VICTORIN 1, thioredoxin H-type 5 |
-0.81 | 0.32 | -0.32 | ||
75 | AT1G77000 | RNI-like superfamily protein | ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B |
-0.81 | 0.3 | -0.33 | ||
76 | AT2G30140 | UDP-Glycosyltransferase superfamily protein | -0.8 | 0.3 | -0.31 | |||
77 | AT3G20250 | pumilio 5 | pumilio 5, pumilio 5 | -0.79 | 0.31 | -0.32 | ||
78 | AT3G13310 | Chaperone DnaJ-domain superfamily protein | -0.79 | 0.33 | -0.33 | |||
79 | AT1G54100 | aldehyde dehydrogenase 7B4 | aldehyde dehydrogenase 7B4 | -0.79 | 0.3 | -0.3 | ||
80 | AT2G16720 | myb domain protein 7 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, myb domain protein 7 |
-0.79 | 0.33 | -0.3 | ||
81 | AT5G54840 | Ras-related small GTP-binding family protein | ATSGP1, SGP1 | -0.79 | 0.32 | -0.33 | ||
82 | AT3G14060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.78 | 0.32 | -0.31 | |||
83 | AT1G01720 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 2, ATAF1 |
-0.78 | 0.31 | -0.3 | ||
84 | AT5G02230 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.78 | 0.3 | -0.31 | |||
85 | AT2G15480 | UDP-glucosyl transferase 73B5 | UDP-glucosyl transferase 73B5 | -0.78 | 0.34 | -0.32 | ||
86 | AT2G30360 | SOS3-interacting protein 4 | CBL-INTERACTING PROTEIN KINASE 11, PROTEIN KINASE SOS2-LIKE 5, SOS3-interacting protein 4, SNF1-RELATED PROTEIN KINASE 3.22 |
-0.77 | 0.32 | -0.32 | ||
87 | AT4G19230 | cytochrome P450, family 707, subfamily A, polypeptide 1 | cytochrome P450, family 707, subfamily A, polypeptide 1 |
-0.77 | 0.29 | -0.3 | ||
88 | AT3G03310 | lecithin:cholesterol acyltransferase 3 | ARABIDOPSIS LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3, lecithin:cholesterol acyltransferase 3 |
-0.77 | 0.32 | -0.31 | ||
89 | AT2G37770 | NAD(P)-linked oxidoreductase superfamily protein | Aldo-keto reductase family 4 member C9, Chloroplastic aldo-keto reductase |
-0.77 | 0.31 | -0.3 | ||
90 | AT1G66760 | MATE efflux family protein | -0.76 | 0.3 | -0.32 | |||
91 | AT2G39350 | ABC-2 type transporter family protein | ATP-binding cassette G1 | -0.76 | 0.3 | -0.32 | ||
92 | AT3G11420 | Protein of unknown function (DUF604) | -0.76 | 0.32 | -0.31 | |||
93 | AT1G05340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.32 | -0.34 | |||
94 | AT1G62570 | flavin-monooxygenase glucosinolate S-oxygenase 4 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
-0.75 | 0.32 | -0.34 | ||
95 | AT2G46270 | G-box binding factor 3 | G-box binding factor 3 | -0.74 | 0.33 | -0.34 | ||
96 | AT5G39520 | Protein of unknown function (DUF1997) | -0.74 | 0.32 | -0.3 | |||
97 | AT1G71080 | RNA polymerase II transcription elongation factor | -0.74 | 0.3 | -0.33 | |||
98 | AT1G64660 | methionine gamma-lyase | methionine gamma-lyase, methionine gamma-lyase |
-0.74 | 0.32 | -0.32 | ||
99 | AT5G24090 | chitinase A | chitinase A, chitinase A | -0.74 | 0.32 | -0.32 | ||
100 | AT4G15490 | UDP-Glycosyltransferase superfamily protein | UGT84A3 | -0.74 | 0.29 | -0.31 | ||
101 | AT5G43580 | Serine protease inhibitor, potato inhibitor I-type family protein |
UNUSUAL SERINE PROTEASE INHIBITOR | -0.73 | 0.32 | -0.32 | ||
102 | AT4G01610 | Cysteine proteinases superfamily protein | -0.73 | 0.3 | -0.34 | |||
103 | AT5G63450 | cytochrome P450, family 94, subfamily B, polypeptide 1 | cytochrome P450, family 94, subfamily B, polypeptide 1 |
-0.73 | 0.3 | -0.29 | ||
104 | AT4G22820 | A20/AN1-like zinc finger family protein | -0.72 | 0.3 | -0.3 | |||
105 | AT5G17490 | RGA-like protein 3 | AtRGL3, RGA-like protein 3 | -0.72 | 0.33 | -0.32 | ||
106 | AT3G29575 | ABI five binding protein 3 | ABI five binding protein 3 | -0.71 | 0.32 | -0.32 | ||
107 | AT4G34230 | cinnamyl alcohol dehydrogenase 5 | cinnamyl alcohol dehydrogenase 5, cinnamyl alcohol dehydrogenase 5, cinnamyl alcohol dehydrogenase 5 |
-0.71 | 0.31 | -0.34 | ||
108 | AT4G09030 | arabinogalactan protein 10 | arabinogalactan protein 10, ATAGP10 |
-0.71 | 0.32 | -0.32 | ||
109 | AT5G54300 | Protein of unknown function (DUF761) | -0.71 | 0.32 | -0.32 |