AGICode | AT2G16520 |
Description | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G16520 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.32 | -0.31 | |||
2 | AT3G02390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast. |
-0.71 | 0.31 | -0.31 | |||
3 | AT3G22710 | F-box family protein | -0.71 | 0.36 | -0.33 | |||
4 | AT4G25560 | myb domain protein 18 | myb domain protein 18, LONG AFTER FAR-RED LIGHT 1, myb domain protein 18 |
-0.7 | 0.33 | -0.31 | ||
5 | AT4G27140 | seed storage albumin 1 | AT2S1, seed storage albumin 1 | 0.64 | 0.33 | -0.34 | ||
6 | AT4G15630 | Uncharacterised protein family (UPF0497) | 0.63 | 0.32 | -0.31 | |||
7 | AT5G40320 | Cysteine/Histidine-rich C1 domain family protein | -0.63 | 0.31 | -0.31 | |||
8 | AT3G62480 | transposable element gene | 0.61 | 0.33 | -0.34 | |||
9 | AT1G10417 | Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. |
0.61 | 0.3 | -0.31 | |||
10 | AT4G17610 | tRNA/rRNA methyltransferase (SpoU) family protein | -0.6 | 0.31 | -0.29 | |||
11 | AT5G58570 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.31 | -0.3 | |||
12 | AT3G12360 | Ankyrin repeat family protein | INCREASED TOLERANCE TO NACL | 0.58 | 0.28 | -0.3 | ||
13 | AT3G46380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.3 | -0.31 | |||
14 | AT5G39720 | avirulence induced gene 2 like protein | avirulence induced gene 2 like protein |
0.57 | 0.31 | -0.32 | ||
15 | AT1G55040 | zinc finger (Ran-binding) family protein | -0.56 | 0.32 | -0.32 | |||
16 | AT2G24300 | Calmodulin-binding protein | -0.55 | 0.33 | -0.32 | |||
17 | AT2G14160 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.55 | 0.33 | -0.32 | |||
18 | AT1G32660 | F-box and associated interaction domains-containing protein | -0.54 | 0.32 | -0.33 | |||
19 | AT2G43040 | tetratricopeptide repeat (TPR)-containing protein | no pollen germination 1 | -0.53 | 0.33 | -0.32 | ||
20 | AT1G25540 | phytochrome and flowering time regulatory protein (PFT1) | mediator 25, PHYTOCHROME AND FLOWERING TIME 1 |
-0.53 | 0.29 | -0.32 | ||
21 | AT5G57580 | Calmodulin-binding protein | 0.53 | 0.31 | -0.3 | |||
22 | AT1G63030 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 2 | 0.53 | 0.3 | -0.33 | ||
23 | AT4G27190 | NB-ARC domain-containing disease resistance protein | -0.52 | 0.31 | -0.31 | |||
24 | AT3G58890 | RNI-like superfamily protein | -0.52 | 0.31 | -0.3 | |||
25 | AT1G20690 | SWI-SNF-related chromatin binding protein | -0.52 | 0.31 | -0.34 | |||
26 | AT5G19020 | mitochondrial editing factor 18 | mitochondrial editing factor 18 | -0.52 | 0.32 | -0.31 | ||
27 | AT1G34190 | NAC domain containing protein 17 | NAC domain containing protein 17, NAC domain containing protein 17 |
0.52 | 0.33 | -0.31 | ||
28 | AT2G10050 | transposable element gene | 0.52 | 0.34 | -0.3 | |||
29 | AT1G31814 | FRIGIDA like 2 | FRIGIDA like 2 | -0.52 | 0.3 | -0.32 | ||
30 | AT2G04990 | transposable element gene | 0.52 | 0.32 | -0.32 | |||
31 | AT1G06990 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.51 | 0.31 | -0.3 | |||
32 | AT5G09790 | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5, PIGMENT DEFECTIVE 336, SETDOMAIN GROUP 15 |
-0.51 | 0.33 | -0.3 | ||
33 | AT4G11660 | winged-helix DNA-binding transcription factor family protein |
AT-HSFB2B, HEAT SHOCK TRANSCRIPTION FACTOR B2B |
0.51 | 0.3 | -0.34 | ||
34 | AT5G28570 | transposable element gene | 0.51 | 0.3 | -0.33 | |||
35 | AT5G50990 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.51 | 0.32 | -0.31 | |||
36 | AT3G09240 | Protein kinase protein with tetratricopeptide repeat domain | -0.51 | 0.31 | -0.31 | |||
37 | AT1G13570 | F-box/RNI-like superfamily protein | -0.51 | 0.3 | -0.31 | |||
38 | AT5G07200 | gibberellin 20-oxidase 3 | ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, gibberellin 20-oxidase 3, YAP169 |
-0.51 | 0.31 | -0.3 | ||
39 | AT5G23780 | DOMAIN OF UNKNOWN FUNCTION 724 9 | DOMAIN OF UNKNOWN FUNCTION 724 9, DOMAIN OF UNKNOWN FUNCTION 724 9 |
-0.51 | 0.31 | -0.31 | ||
40 | AT1G44935 | transposable element gene | sadhu non-coding retrotransposon 9-1 |
0.51 | 0.31 | -0.33 | ||
41 | AT3G06990 | Cysteine/Histidine-rich C1 domain family protein | -0.51 | 0.3 | -0.32 | |||
42 | AT2G30860 | glutathione S-transferase PHI 9 | ATGSTF7, glutathione S-transferase PHI 9, GLUTTR, glutathione S-transferase PHI 9 |
0.5 | 0.32 | -0.32 | ||
43 | AT4G30120 | heavy metal atpase 3 | A. THALIANA HEAVY METAL ATPASE 3, heavy metal atpase 3 |
0.5 | 0.32 | -0.3 | ||
44 | AT5G66360 | Ribosomal RNA adenine dimethylase family protein | adenosine dimethyl transferase 1B | -0.5 | 0.32 | -0.3 | ||
45 | AT2G26950 | myb domain protein 104 | myb domain protein 104, myb domain protein 104 |
-0.5 | 0.32 | -0.29 | ||
46 | AT3G43820 | pseudogene, copper amine oxidase protein family, similar to SP|Q43077 Amine oxidase (copper-containing) precursor (EC 1.4.3.6) {Pisum sativum}; contains Pfam profile PF01179: Copper amine oxidase, enzyme domain; blastp match of 57% identity and 2.6e-48 P-value to GP|5733089|gb|AAD49420.1|AF172681_1|AF172681 amine oxidase {Canavalia lineata} |
0.5 | 0.31 | -0.32 | |||
47 | AT1G18190 | golgin candidate 2 | golgin candidate 2 | 0.5 | 0.31 | -0.33 | ||
48 | ATCG00020 | photosystem II reaction center protein A | photosystem II reaction center protein A |
0.5 | 0.33 | -0.31 | ||
49 | AT5G26130 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.5 | 0.33 | -0.31 | |||
50 | AT2G38840 | Guanylate-binding family protein | -0.49 | 0.33 | -0.33 | |||
51 | AT1G33500 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.49 | 0.33 | -0.31 | |||
52 | AT3G54610 | histone acetyltransferase of the GNAT family 1 | BIG TOP, general control non-repressible 5, HAC3, HAG01, histone acetyltransferase of the GNAT family 1, HISTONE ACETYLTRANSFERASE 1 |
-0.49 | 0.33 | -0.31 | ||
53 | AT1G48220 | Protein kinase superfamily protein | 0.49 | 0.33 | -0.32 | |||
54 | AT2G31850 | unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.48 | 0.33 | -0.32 | |||
55 | AT5G28090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.48 | 0.34 | -0.31 | |||
56 | AT2G02440 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.3 | -0.3 | |||
57 | AT1G14110 | fucosyltransferase 9 | ATFUT9, fucosyltransferase 9 | 0.48 | 0.32 | -0.31 | ||
58 | AT2G24340 | sequence-specific DNA binding transcription factors | 0.48 | 0.3 | -0.32 | |||
59 | AT4G03380 | BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.31 | -0.33 | |||
60 | AT4G11870 | unknown protein; Has 98 Blast hits to 93 proteins in 36 species: Archae - 2; Bacteria - 26; Metazoa - 15; Fungi - 20; Plants - 2; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
-0.48 | 0.31 | -0.31 | |||
61 | AT5G05030 | Protein of Unknown Function (DUF239) | -0.48 | 0.31 | -0.31 | |||
62 | AT1G43320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 6 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.47 | 0.31 | -0.34 | |||
63 | AT1G64800 | DNA binding;sequence-specific DNA binding transcription factors |
-0.47 | 0.32 | -0.3 | |||
64 | AT1G74480 | RWP-RK domain-containing protein | AtRKD2, RWP-RK domain containing 2 | 0.47 | 0.32 | -0.31 | ||
65 | AT3G58790 | galacturonosyltransferase 15 | galacturonosyltransferase 15 | 0.47 | 0.3 | -0.31 | ||
66 | AT5G06850 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
0.47 | 0.3 | -0.31 | |||
67 | AT5G27460 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.46 | 0.31 | -0.33 | |||
68 | AT1G20800 | F-box family protein | -0.46 | 0.32 | -0.32 | |||
69 | AT5G06910 | J-domain protein 6 | J-domain protein 6 | -0.46 | 0.31 | -0.31 | ||
70 | AT1G33817 | transposable element gene | -0.46 | 0.33 | -0.31 | |||
71 | AT5G53680 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.45 | 0.31 | -0.34 | |||
72 | AT2G28010 | Eukaryotic aspartyl protease family protein | 0.45 | 0.33 | -0.32 | |||
73 | AT3G46520 | actin-12 | actin-12 | 0.45 | 0.3 | -0.33 | ||
74 | AT1G55570 | SKU5 similar 12 | SKU5 similar 12 | 0.45 | 0.31 | -0.32 | ||
75 | AT2G24930 | transposable element gene | 0.45 | 0.34 | -0.31 | |||
76 | AT1G42410 | transposable element gene | 0.44 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
77 | C0181 | MST_2904.3 | - | - | - | -0.75 | 0.42 | -0.44 |