AT2G03870 : EMBRYO DEFECTIVE 2816
Query Information
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AGICode AT2G03870
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G03870 Small nuclear ribonucleoprotein family protein EMBRYO DEFECTIVE 2816 1 0.35 -0.3
2 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.78 0.33 -0.3
3 AT4G29390 Ribosomal protein S30 family protein 0.75 0.32 -0.32
4 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.71 0.32 -0.33
5 AT3G53580 diaminopimelate epimerase family protein 0.7 0.29 -0.32
6 AT4G08620 sulphate transporter 1;1 sulphate transporter 1;1 0.7 0.33 -0.34
7 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.69 0.29 -0.33
8 AT2G37975 Yos1-like protein 0.69 0.32 -0.32
9 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 0.68 0.32 -0.31
10 AT2G26410 IQ-domain 4 IQ-domain 4 0.68 0.32 -0.31
11 AT2G43810 Small nuclear ribonucleoprotein family protein 0.67 0.32 -0.35
12 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.33 -0.33
13 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.31 -0.31
14 AT3G54970 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.67 0.31 -0.33
15 AT2G17710 unknown protein; Has 39 Blast hits to 39 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.32 -0.32
16 AT3G47980 Integral membrane HPP family protein 0.66 0.32 -0.3
17 AT1G65270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; Has
149 Blast hits to 149 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.66 0.32 -0.31
18 AT3G62490 transposable element gene -0.66 0.34 -0.31
19 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain 0.66 0.34 -0.3
20 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 0.65 0.31 -0.33
21 AT1G72570 Integrase-type DNA-binding superfamily protein 0.65 0.34 -0.32
22 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.65 0.3 -0.3
23 AT3G52080 cation/hydrogen exchanger 28 cation/hydrogen exchanger 28 -0.64 0.3 -0.29
24 AT3G60790 F-box family protein -0.63 0.31 -0.31
25 AT1G34480 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.31
26 AT1G29990 prefoldin 6 prefoldin 6 0.62 0.33 -0.33
27 AT1G63560 Receptor-like protein kinase-related family protein -0.62 0.31 -0.31
28 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.34 -0.33
29 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.61 0.32 -0.29
30 AT1G11040 HSP40/DnaJ peptide-binding protein 0.61 0.31 -0.31
31 AT2G39500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.61 0.33 -0.32
32 AT1G26500 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.29 -0.32
33 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 -0.6 0.33 -0.32
34 AT5G51290 Diacylglycerol kinase family protein -0.6 0.31 -0.33
35 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.6 0.33 -0.31
36 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.6 0.32 -0.3
37 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 -0.58 0.31 -0.31
38 AT1G17240 receptor like protein 2 receptor like protein 2, receptor
like protein 2		 -0.58 0.33 -0.3
39 AT1G59790 Cullin family protein -0.58 0.3 -0.29
40 AT1G63190 Cystatin/monellin superfamily protein -0.58 0.3 -0.3
41 AT4G03700 transposable element gene -0.56 0.31 -0.32
42 AT5G52330 TRAF-like superfamily protein -0.56 0.3 -0.3
43 AT5G47530 Auxin-responsive family protein -0.55 0.32 -0.3
44 AT1G19390 Wall-associated kinase family protein -0.55 0.31 -0.29
45 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.54 0.3 -0.32
46 AT3G59610 F-box family protein / jacalin lectin family protein -0.54 0.33 -0.32
47 AT1G33813 transposable element gene -0.54 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
48 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.78 0.45 -0.45 C0225