AGICode | AT2G05020 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G05020 | transposable element gene | 1 | 0.32 | -0.31 | |||
2 | AT5G14870 | cyclic nucleotide-gated channel 18 | CYCLIC NUCLEOTIDE-GATED CHANNEL 18, cyclic nucleotide-gated channel 18 |
0.7 | 0.32 | -0.33 | ||
3 | AT1G47210 | cyclin-dependent protein kinase 3;2 | cyclin-dependent protein kinase 3;2 |
-0.64 | 0.33 | -0.34 | ||
4 | AT3G47630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325 Blast hits to 325 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
-0.63 | 0.32 | -0.27 | |||
5 | AT5G11040 | TRS120 | AtTRS120, TRS120 | 0.61 | 0.32 | -0.33 | ||
6 | AT2G14170 | aldehyde dehydrogenase 6B2 | aldehyde dehydrogenase 6B2 | -0.6 | 0.31 | -0.31 | ||
7 | AT4G01960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.31 | -0.31 | |||
8 | AT2G46340 | SPA (suppressor of phyA-105) protein family | SUPPRESSOR OF PHYA-105 1 | 0.59 | 0.32 | -0.31 | ||
9 | AT5G57130 | Clp amino terminal domain-containing protein | 0.59 | 0.3 | -0.31 | |||
10 | AT5G54650 | formin homology5 | FORMIN HOMOLOGY 5, formin homology5 |
0.59 | 0.33 | -0.33 | ||
11 | AT5G57830 | Protein of unknown function, DUF593 | -0.58 | 0.32 | -0.32 | |||
12 | AT5G12430 | Heat shock protein DnaJ with tetratricopeptide repeat | tetratricopeptide repeat 16 | 0.58 | 0.31 | -0.32 | ||
13 | AT1G70060 | SIN3-like 4 | SIN3-like 4 | 0.58 | 0.34 | -0.31 | ||
14 | AT1G13070 | putative cytochrome P450 | cytochrome P450, family 71, subfamily B, polypeptide 27 |
0.57 | 0.31 | -0.32 | ||
15 | AT4G13800 | Protein of unknown function (DUF803) | 0.57 | 0.31 | -0.31 | |||
16 | AT3G28190 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.31 | -0.32 | |||
17 | AT4G36700 | RmlC-like cupins superfamily protein | -0.56 | 0.31 | -0.33 | |||
18 | AT2G26980 | CBL-interacting protein kinase 3 | CBL-interacting protein kinase 3, SNF1-RELATED PROTEIN KINASE 3.17 |
-0.56 | 0.31 | -0.32 | ||
19 | AT4G11840 | phospholipase D gamma 3 | phospholipase D gamma 3 | 0.55 | 0.33 | -0.32 | ||
20 | AT1G54420 | unknown protein; Has 9 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.55 | 0.33 | -0.32 | |||
21 | AT1G27220 | paired amphipathic helix repeat-containing protein | -0.55 | 0.31 | -0.31 | |||
22 | AT3G52260 | Pseudouridine synthase family protein | -0.55 | 0.3 | -0.33 | |||
23 | AT2G01330 | nucleotide binding | 0.55 | 0.32 | -0.32 | |||
24 | AT4G03390 | STRUBBELIG-receptor family 3 | STRUBBELIG-receptor family 3 | 0.55 | 0.3 | -0.32 | ||
25 | AT3G22640 | cupin family protein | PAP85 | -0.55 | 0.31 | -0.31 | ||
26 | AT5G18340 | ARM repeat superfamily protein | -0.54 | 0.32 | -0.32 | |||
27 | AT1G16980 | trehalose-phosphatase/synthase 2 | trehalose-phosphatase/synthase 2, TREHALOSE -6-PHOSPHATASE SYNTHASE S2, trehalose-phosphatase/synthase 2 |
-0.54 | 0.33 | -0.31 | ||
28 | AT3G21210 | zinc ion binding | 0.54 | 0.31 | -0.32 | |||
29 | AT5G12910 | Histone superfamily protein | 0.54 | 0.31 | -0.31 | |||
30 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
-0.54 | 0.31 | -0.32 | ||
31 | AT5G51200 | Protein of unknown function (DUF3414) | EMBRYO DEFECTIVE 3142 | 0.54 | 0.33 | -0.32 | ||
32 | AT3G32040 | Terpenoid synthases superfamily protein | -0.53 | 0.34 | -0.29 | |||
33 | AT2G13680 | callose synthase 5 | ARABIDOPSIS THALIANA GLUCAN SYNTHASE-LIKE 2, callose synthase 5, GLUCAN SYNTHASE-LIKE 2 |
-0.53 | 0.33 | -0.32 | ||
34 | AT4G22800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.3 | |||
35 | AT2G33100 | cellulose synthase-like D1 | cellulose synthase-like D1, cellulose synthase-like D1, CELLULOSE-SYNTHASE LIKE D1 |
0.53 | 0.33 | -0.3 | ||
36 | AT4G17790 | SNARE associated Golgi protein family | -0.53 | 0.33 | -0.32 | |||
37 | AT1G04380 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.53 | 0.31 | -0.3 | |||
38 | AT2G04840 | Protein of unknown function (DUF295) | 0.53 | 0.32 | -0.31 | |||
39 | AT2G03740 | late embryogenesis abundant domain-containing protein / LEA domain-containing protein |
0.53 | 0.32 | -0.32 | |||
40 | AT5G65490 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.32 | -0.33 | |||
41 | AT4G00160 | F-box/RNI-like/FBD-like domains-containing protein | 0.52 | 0.32 | -0.29 | |||
42 | AT2G23960 | Class I glutamine amidotransferase-like superfamily protein | -0.52 | 0.32 | -0.33 | |||
43 | AT2G29740 | UDP-glucosyl transferase 71C2 | UDP-glucosyl transferase 71C2 | -0.52 | 0.29 | -0.3 | ||
44 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.52 | 0.32 | -0.32 | |||
45 | AT4G05230 | Ubiquitin-like superfamily protein | 0.52 | 0.32 | -0.33 | |||
46 | AT4G03500 | Ankyrin repeat family protein | 0.52 | 0.3 | -0.3 | |||
47 | AT2G14300 | transposable element gene | -0.51 | 0.31 | -0.29 | |||
48 | AT5G28820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.51 | 0.32 | -0.33 | |||
49 | AT4G13700 | purple acid phosphatase 23 | ATPAP23, purple acid phosphatase 23 |
-0.51 | 0.31 | -0.33 | ||
50 | AT5G46470 | disease resistance protein (TIR-NBS-LRR class) family | RESISTANT TO P. SYRINGAE 6 | 0.51 | 0.32 | -0.32 | ||
51 | AT4G10510 | Subtilase family protein | 0.51 | 0.32 | -0.31 | |||
52 | AT3G28780 | Protein of unknown function (DUF1216) | 0.51 | 0.32 | -0.31 | |||
53 | AT2G33690 | Late embryogenesis abundant protein, group 6 | 0.51 | 0.32 | -0.34 | |||
54 | AT2G17210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.51 | 0.31 | -0.3 | |||
55 | AT4G36870 | BEL1-like homeodomain 2 | BEL1-like homeodomain 2, SAWTOOTH 1 |
0.51 | 0.32 | -0.3 | ||
56 | AT3G16930 | unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.32 | -0.32 | |||
57 | AT1G47370 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.5 | 0.32 | -0.31 | |||
58 | AT5G41710 | transposable element gene | -0.5 | 0.32 | -0.33 | |||
59 | AT3G50580 | LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ECA1 gametogenesis related family protein (TAIR:AT1G44191.1); Has 132049 Blast hits to 55074 proteins in 2314 species: Archae - 393; Bacteria - 25609; Metazoa - 44661; Fungi - 17591; Plants - 17316; Viruses - 4153; Other Eukaryotes - 22326 (source: NCBI BLink). |
0.5 | 0.32 | -0.32 | |||
60 | AT2G10500 | transposable element gene | -0.48 | 0.31 | -0.32 | |||
61 | AT4G36050 | endonuclease/exonuclease/phosphatase family protein | 0.48 | 0.33 | -0.31 | |||
62 | AT4G17905 | RING/U-box superfamily protein | ATL4H | 0.48 | 0.31 | -0.31 | ||
63 | AT5G38330 | low-molecular-weight cysteine-rich 80 | low-molecular-weight cysteine-rich 80 |
0.48 | 0.32 | -0.31 | ||
64 | AT1G76220 | Arabidopsis protein of unknown function (DUF241) | -0.46 | 0.3 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
65 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
0.72 | 0.45 | -0.46 | ||
66 | C0161 | MST_1566.3 | - | - | - | -0.64 | 0.48 | -0.45 | ||
67 | C0179 | MST_2494.8 | - | - | - | -0.47 | 0.34 | -0.31 |