AT2G04039 : -
Query Information
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AGICode AT2G04039
Description unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 1 0.3 -0.33
2 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.94 0.31 -0.34
3 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.92 0.34 -0.31
4 AT1G76450 Photosystem II reaction center PsbP family protein 0.91 0.3 -0.31
5 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.91 0.3 -0.31
6 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.91 0.3 -0.31
7 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.91 0.33 -0.32
8 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.9 0.3 -0.34
9 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit glyceraldehyde-3-phosphate
dehydrogenase B subunit		 0.9 0.32 -0.31
10 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.9 0.33 -0.31
11 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.89 0.31 -0.32
12 AT5G54290 cytochrome c biogenesis protein family CcdA 0.89 0.31 -0.31
13 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.89 0.35 -0.3
14 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.89 0.33 -0.33
15 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.89 0.3 -0.34
16 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.88 0.33 -0.31
17 AT1G09340 chloroplast RNA binding chloroplast RNA binding,
CHLOROPLAST STEM-LOOP BINDING
PROTEIN OF 41 KDA,
heteroglycan-interacting protein
1.3		 0.88 0.33 -0.31
18 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.88 0.3 -0.32
19 AT1G14150 PsbQ-like 2 Photosynthetic NDH subcomplex L
2, PsbQ-like 1, PsbQ-like 2		 0.88 0.29 -0.3
20 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits
to 146 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.88 0.3 -0.33
21 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.87 0.31 -0.32
22 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.87 0.32 -0.32
23 AT3G43540 Protein of unknown function (DUF1350) 0.87 0.3 -0.31
24 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.31 -0.31
25 AT4G33010 glycine decarboxylase P-protein 1 glycine decarboxylase P-protein 1,
glycine decarboxylase P-protein 1		 0.87 0.32 -0.3
26 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.87 0.32 -0.32
27 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.87 0.32 -0.32
28 AT5G02120 one helix protein one helix protein, PIGMENT
DEFECTIVE 335		 0.87 0.32 -0.32
29 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 0.87 0.31 -0.3
30 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.87 0.31 -0.32
31 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2		 0.87 0.32 -0.31
32 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.86 0.33 -0.31
33 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.86 0.32 -0.33
34 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.86 0.3 -0.32
35 AT1G32520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 143 Blast hits to 142
proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa -
39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink).		 0.86 0.32 -0.29
36 AT3G21870 cyclin p2;1 cyclin p2;1 0.86 0.32 -0.3
37 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.86 0.32 -0.32
38 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.86 0.31 -0.3
39 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.86 0.31 -0.33
40 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.33 -0.32
41 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.85 0.32 -0.31
42 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.85 0.32 -0.32
43 AT1G43670 Inositol monophosphatase family protein Arabidopsis thaliana cytosolic
fructose-1,6-bisphosphatase,
fructose-1,6-bisphosphatase,
FRUCTOSE INSENSITIVE 1		 0.85 0.32 -0.32
44 AT1G44000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits
to 212 proteins in 76 species: Archae - 0; Bacteria - 96;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.85 0.3 -0.32
45 AT4G12830 alpha/beta-Hydrolases superfamily protein 0.85 0.32 -0.32
46 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.85 0.32 -0.3
47 AT1G68010 hydroxypyruvate reductase ATHPR1, hydroxypyruvate reductase 0.85 0.33 -0.34
48 AT1G64150 Uncharacterized protein family (UPF0016) 0.85 0.3 -0.35
49 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.85 0.33 -0.31
50 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.85 0.3 -0.33
51 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, photosystem I light
harvesting complex gene 6		 0.84 0.33 -0.29
52 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 0.84 0.33 -0.31
53 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.84 0.3 -0.32
54 AT5G59250 Major facilitator superfamily protein 0.84 0.31 -0.32
55 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.84 0.32 -0.32
56 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.31 -0.31
57 AT4G10300 RmlC-like cupins superfamily protein 0.84 0.32 -0.29
58 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.84 0.32 -0.31
59 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase 0.84 0.33 -0.31
60 AT5G64460 Phosphoglycerate mutase family protein 0.83 0.31 -0.32
61 AT3G44020 thylakoid lumenal P17.1 protein 0.83 0.31 -0.31
62 AT5G58310 methyl esterase 18 ARABIDOPSIS THALIANA METHYL
ESTERASE 18, methyl esterase 18		 0.83 0.32 -0.32
63 AT2G21370 xylulose kinase-1 xylulose kinase-1, XYLULOSE KINASE
1		 0.83 0.31 -0.3
64 AT1G22850 SNARE associated Golgi protein family 0.83 0.33 -0.31
65 AT5G08650 Small GTP-binding protein 0.83 0.32 -0.3
66 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.82 0.31 -0.31
67 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.82 0.33 -0.31
68 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 0.82 0.31 -0.32
69 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.82 0.31 -0.31
70 AT1G23310 glutamate:glyoxylate aminotransferase ALANINE-2-OXOGLUTARATE
AMINOTRANSFERASE 1,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 1,
glutamate:glyoxylate
aminotransferase		 0.82 0.32 -0.33
71 AT4G27030 fatty acid desaturase A FATTY ACID DESATURASE 4, fatty
acid desaturase A		 0.82 0.3 -0.31
72 AT1G79040 photosystem II subunit R photosystem II subunit R 0.82 0.33 -0.33
73 AT5G14740 carbonic anhydrase 2 BETA CARBONIC ANHYDRASE 2,
CARBONIC ANHYDRASE 18, carbonic
anhydrase 2		 0.82 0.31 -0.29
74 AT5G57960 GTP-binding protein, HflX 0.82 0.3 -0.31
75 AT1G50450 Saccharopine dehydrogenase 0.82 0.3 -0.32
76 AT5G27560 Domain of unknown function (DUF1995) 0.82 0.33 -0.31
77 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE 0.82 0.31 -0.29
78 AT1G34300 lectin protein kinase family protein -0.71 0.32 -0.3
79 AT5G35940 Mannose-binding lectin superfamily protein -0.69 0.31 -0.31
80 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 -0.67 0.3 -0.28
81 AT4G31500 cytochrome P450, family 83, subfamily B, polypeptide 1 ALTERED TRYPTOPHAN REGULATION 4,
cytochrome P450, family 83,
subfamily B, polypeptide 1, RED
ELONGATED 1, RUNT 1, SUPERROOT 2		 -0.66 0.34 -0.32
82 AT5G10540 Zincin-like metalloproteases family protein -0.64 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.83 0.41 -0.45
84 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.8 0.47 -0.53 C0241