AGICode | AT2G17240 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G17240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). |
1 | 0.31 | -0.31 | |||
2 | AT2G41720 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 2654 | 0.93 | 0.32 | -0.33 | ||
3 | AT3G18680 | Amino acid kinase family protein | 0.91 | 0.3 | -0.31 | |||
4 | AT2G17972 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.91 | 0.31 | -0.32 | |||
5 | AT3G60620 | cytidinediphosphate diacylglycerol synthase 5 | cytidinediphosphate diacylglycerol synthase 5 |
0.89 | 0.33 | -0.32 | ||
6 | AT4G19100 | Protein of unknown function (DUF3464) | photosynthesis affected mutant 68 | 0.89 | 0.32 | -0.32 | ||
7 | AT3G29185 | Domain of unknown function (DUF3598) | 0.89 | 0.31 | -0.31 | |||
8 | AT1G11430 | plastid developmental protein DAG, putative | 0.89 | 0.29 | -0.3 | |||
9 | AT1G10960 | ferredoxin 1 | ferredoxin 1, ferredoxin 1 | 0.89 | 0.33 | -0.31 | ||
10 | AT2G33180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.89 | 0.3 | -0.32 | |||
11 | AT5G11270 | overexpressor of cationic peroxidase 3 | overexpressor of cationic peroxidase 3 |
0.89 | 0.32 | -0.3 | ||
12 | AT1G17850 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.89 | 0.31 | -0.29 | |||
13 | AT3G58140 | phenylalanyl-tRNA synthetase class IIc family protein | 0.88 | 0.33 | -0.29 | |||
14 | AT3G26710 | cofactor assembly of complex C | cofactor assembly of complex C | 0.88 | 0.31 | -0.33 | ||
15 | AT3G51870 | Mitochondrial substrate carrier family protein | 0.88 | 0.33 | -0.31 | |||
16 | AT4G14890 | 2Fe-2S ferredoxin-like superfamily protein | ferredoxin C 2 | 0.88 | 0.29 | -0.33 | ||
17 | AT1G66820 | glycine-rich protein | 0.88 | 0.33 | -0.31 | |||
18 | AT1G49380 | cytochrome c biogenesis protein family | 0.88 | 0.31 | -0.33 | |||
19 | AT5G14100 | non-intrinsic ABC protein 14 | ATP-binding cassette I11, ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14, non-intrinsic ABC protein 14 |
0.87 | 0.32 | -0.3 | ||
20 | AT2G20020 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | ATCAF1, CAF1 | 0.87 | 0.31 | -0.31 | ||
21 | AT1G10522 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.87 | 0.32 | -0.33 | |||
22 | AT4G38490 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.87 | 0.3 | -0.31 | |||
23 | AT4G34830 | Pentatricopeptide repeat (PPR) superfamily protein | MATURATION OF RBCL 1, PIGMENT DEFECTIVE 346 |
0.87 | 0.33 | -0.32 | ||
24 | AT1G73110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.87 | 0.3 | -0.32 | |||
25 | AT2G15820 | endonucleases | ORGANELLE TRANSCRIPT PROCESSING 51 | 0.87 | 0.31 | -0.3 | ||
26 | AT3G25805 | unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.87 | 0.32 | -0.33 | |||
27 | AT1G51100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.87 | 0.3 | -0.3 | |||
28 | AT2G21385 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.87 | 0.34 | -0.28 | |||
29 | AT2G34640 | plastid transcriptionally active 12 | HEMERA, plastid transcriptionally active 12 |
0.86 | 0.3 | -0.34 | ||
30 | AT3G09580 | FAD/NAD(P)-binding oxidoreductase family protein | 0.86 | 0.31 | -0.33 | |||
31 | AT3G02450 | cell division protein ftsH, putative | 0.86 | 0.32 | -0.3 | |||
32 | AT5G36170 | high chlorophyll fluorescent 109 | ATPRFB, high chlorophyll fluorescent 109 |
0.86 | 0.31 | -0.32 | ||
33 | AT5G20040 | isopentenyltransferase 9 | ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 9, isopentenyltransferase 9 |
0.86 | 0.33 | -0.3 | ||
34 | AT4G31040 | CemA-like proton extrusion protein-related | 0.86 | 0.32 | -0.32 | |||
35 | AT1G36390 | Co-chaperone GrpE family protein | 0.86 | 0.32 | -0.31 | |||
36 | AT3G19810 | Protein of unknown function (DUF177) | 0.86 | 0.32 | -0.31 | |||
37 | AT5G23310 | Fe superoxide dismutase 3 | Fe superoxide dismutase 3 | 0.86 | 0.31 | -0.31 | ||
38 | AT3G05410 | Photosystem II reaction center PsbP family protein | 0.86 | 0.32 | -0.34 | |||
39 | AT5G52190 | Sugar isomerase (SIS) family protein | 0.86 | 0.31 | -0.32 | |||
40 | AT5G46580 | pentatricopeptide (PPR) repeat-containing protein | 0.86 | 0.31 | -0.3 | |||
41 | AT5G13140 | Pollen Ole e 1 allergen and extensin family protein | 0.85 | 0.31 | -0.33 | |||
42 | AT5G02710 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
0.85 | 0.3 | -0.3 | |||
43 | AT2G18910 | hydroxyproline-rich glycoprotein family protein | 0.85 | 0.33 | -0.31 | |||
44 | AT5G48630 | Cyclin family protein | 0.85 | 0.32 | -0.32 | |||
45 | AT5G22640 | MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein |
embryo defective 1211 | 0.85 | 0.31 | -0.32 | ||
46 | AT2G47910 | chlororespiratory reduction 6 | chlororespiratory reduction 6 | 0.84 | 0.31 | -0.31 | ||
47 | AT4G39120 | myo-inositol monophosphatase like 2 | HISTIDINE BIOSYNTHESIS 7, myo-inositol monophosphatase like 2 |
0.84 | 0.33 | -0.33 | ||
48 | AT2G36835 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.32 | -0.31 | |||
49 | AT1G60600 | UbiA prenyltransferase family protein | ABERRANT CHLOROPLAST DEVELOPMENT 4 | 0.84 | 0.34 | -0.31 | ||
50 | AT1G17200 | Uncharacterised protein family (UPF0497) | 0.84 | 0.31 | -0.32 | |||
51 | AT5G64580 | AAA-type ATPase family protein | EMBRYO DEFECTIVE 3144 | 0.84 | 0.3 | -0.32 | ||
52 | AT1G60550 | enoyl-CoA hydratase/isomerase D | DHNS, enoyl-CoA hydratase/isomerase D |
0.83 | 0.31 | -0.32 | ||
53 | AT3G08740 | elongation factor P (EF-P) family protein | 0.83 | 0.3 | -0.32 | |||
54 | AT1G23360 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
MENG | 0.83 | 0.31 | -0.32 | ||
55 | AT4G34830 | Pentatricopeptide repeat (PPR) superfamily protein | MATURATION OF RBCL 1, PIGMENT DEFECTIVE 346 |
0.83 | 0.32 | -0.3 | ||
56 | AT2G37450 | nodulin MtN21 /EamA-like transporter family protein | 0.83 | 0.34 | -0.3 | |||
57 | AT3G51470 | Protein phosphatase 2C family protein | 0.83 | 0.29 | -0.32 | |||
58 | AT4G14870 | secE/sec61-gamma protein transport protein | SECE1 | 0.83 | 0.31 | -0.32 | ||
59 | AT3G23760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.83 | 0.33 | -0.35 | |||
60 | AT5G63100 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.83 | 0.32 | -0.32 | |||
61 | AT3G59840 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.83 | 0.33 | -0.32 | |||
62 | AT1G08640 | Chloroplast J-like domain 1 | Chloroplast J-like domain 1 | 0.83 | 0.33 | -0.33 | ||
63 | AT5G67070 | ralf-like 34 | ralf-like 34 | 0.82 | 0.31 | -0.31 | ||
64 | AT2G17033 | pentatricopeptide (PPR) repeat-containing protein | 0.82 | 0.32 | -0.28 | |||
65 | AT3G10160 | DHFS-FPGS homolog C | A. THALIANA DHFS-FPGS HOMOLOG C, DHFS-FPGS homolog C, folylpolyglutamate synthetase 2 |
0.82 | 0.33 | -0.33 | ||
66 | AT1G60000 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.82 | 0.31 | -0.34 | |||
67 | AT1G79720 | Eukaryotic aspartyl protease family protein | 0.82 | 0.34 | -0.31 | |||
68 | AT2G33330 | plasmodesmata-located protein 3 | plasmodesmata-located protein 3 | 0.82 | 0.33 | -0.31 | ||
69 | AT2G32765 | small ubiquitinrelated modifier 5 | ATSUMO5, SUMO 5, small ubiquitinrelated modifier 5 |
0.82 | 0.31 | -0.34 | ||
70 | AT5G08400 | Protein of unknown function (DUF3531) | 0.82 | 0.31 | -0.31 | |||
71 | AT4G30825 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.82 | 0.3 | -0.3 | |||
72 | AT4G17540 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.82 | 0.31 | -0.29 | |||
73 | AT5G15390 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.82 | 0.31 | -0.33 | |||
74 | AT1G62990 | KNOTTED-like homeobox of Arabidopsis thaliana 7 | IXR11, KNOTTED-like homeobox of Arabidopsis thaliana 7 |
-0.79 | 0.34 | -0.32 | ||
75 | AT3G13310 | Chaperone DnaJ-domain superfamily protein | -0.78 | 0.31 | -0.32 | |||
76 | AT1G62570 | flavin-monooxygenase glucosinolate S-oxygenase 4 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
-0.77 | 0.3 | -0.32 | ||
77 | AT1G77000 | RNI-like superfamily protein | ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B |
-0.76 | 0.34 | -0.31 | ||
78 | AT5G12270 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.75 | 0.31 | -0.32 | |||
79 | AT4G31420 | Zinc finger protein 622 | -0.74 | 0.32 | -0.31 | |||
80 | AT2G02370 | SNARE associated Golgi protein family | -0.74 | 0.32 | -0.3 | |||
81 | AT4G36830 | GNS1/SUR4 membrane protein family | HOS3-1 | -0.73 | 0.32 | -0.32 | ||
82 | AT3G29575 | ABI five binding protein 3 | ABI five binding protein 3 | -0.72 | 0.31 | -0.29 | ||
83 | AT2G17990 | BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). |
-0.71 | 0.31 | -0.3 | |||
84 | AT2G27200 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.7 | 0.33 | -0.31 | |||
85 | AT3G48850 | phosphate transporter 3;2 | phosphate transporter 3;2 | -0.7 | 0.32 | -0.31 | ||
86 | AT1G25280 | tubby like protein 10 | tubby like protein 10, tubby like protein 10 |
-0.69 | 0.32 | -0.31 | ||
87 | AT2G47180 | galactinol synthase 1 | galactinol synthase 1, galactinol synthase 1 |
-0.69 | 0.3 | -0.31 | ||
88 | AT1G76970 | Target of Myb protein 1 | -0.68 | 0.32 | -0.33 | |||
89 | AT5G62020 | heat shock transcription factor B2A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A, heat shock transcription factor B2A |
-0.66 | 0.33 | -0.32 | ||
90 | AT1G60470 | galactinol synthase 4 | galactinol synthase 4, galactinol synthase 4 |
-0.66 | 0.3 | -0.35 | ||
91 | AT5G58700 | phosphatidylinositol-speciwc phospholipase C4 | ATPLC4, phosphatidylinositol-speciwc phospholipase C4 |
-0.65 | 0.33 | -0.27 | ||
92 | AT2G43290 | Calcium-binding EF-hand family protein | multicopy suppressors of snf4 deficiency in yeast 3 |
-0.65 | 0.3 | -0.3 |