AGICode | AT2G22270 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits to 231 proteins in 42 species: Archae - 0; Bacteria - 17; Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G22270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits to 231 proteins in 42 species: Archae - 0; Bacteria - 17; Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
1 | 0.3 | -0.32 | |||
2 | AT4G38060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.33 | -0.32 | |||
3 | AT2G17975 | zinc finger (Ran-binding) family protein | -0.72 | 0.33 | -0.31 | |||
4 | AT1G52910 | Protein of unknown function (DUF1218) | 0.71 | 0.29 | -0.31 | |||
5 | AT3G01340 | Transducin/WD40 repeat-like superfamily protein | 0.7 | 0.31 | -0.32 | |||
6 | AT5G58510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.3 | -0.31 | |||
7 | AT5G14240 | Thioredoxin superfamily protein | 0.69 | 0.31 | -0.33 | |||
8 | AT3G53090 | ubiquitin-protein ligase 7 | ubiquitin-protein ligase 7 | -0.68 | 0.31 | -0.31 | ||
9 | AT5G25560 | CHY-type/CTCHY-type/RING-type Zinc finger protein | -0.68 | 0.32 | -0.32 | |||
10 | AT4G04740 | calcium-dependent protein kinase 23 | ATCPK23, calcium-dependent protein kinase 23 |
-0.68 | 0.31 | -0.33 | ||
11 | AT3G61640 | arabinogalactan protein 20 | arabinogalactan protein 20, Arabinogalactan protein 20 |
0.68 | 0.29 | -0.33 | ||
12 | AT5G27820 | Ribosomal L18p/L5e family protein | 0.68 | 0.31 | -0.31 | |||
13 | AT3G17090 | Protein phosphatase 2C family protein | 0.68 | 0.32 | -0.33 | |||
14 | AT3G57570 | ARM repeat superfamily protein | -0.67 | 0.29 | -0.32 | |||
15 | AT3G60600 | vesicle associated protein | (AT)VAP, vesicle associated protein, VAP27, VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 |
0.67 | 0.32 | -0.33 | ||
16 | AT5G64650 | Ribosomal protein L17 family protein | 0.67 | 0.31 | -0.32 | |||
17 | AT1G13200 | F-box and associated interaction domains-containing protein | -0.67 | 0.31 | -0.33 | |||
18 | AT1G22860 | Vacuolar sorting protein 39 | -0.66 | 0.32 | -0.31 | |||
19 | AT2G23310 | Rer1 family protein | ATRER1C1 | 0.66 | 0.33 | -0.32 | ||
20 | AT1G16710 | histone acetyltransferase of the CBP family 12 | histone acetyltransferase of the CBP family 12 |
-0.65 | 0.3 | -0.31 | ||
21 | AT2G46930 | Pectinacetylesterase family protein | 0.63 | 0.33 | -0.3 | |||
22 | AT1G78150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.3 | -0.33 | |||
23 | AT2G16820 | transposable element gene | 0.63 | 0.3 | -0.31 | |||
24 | AT2G20840 | Secretory carrier membrane protein (SCAMP) family protein | 0.63 | 0.31 | -0.31 | |||
25 | AT5G56320 | expansin A14 | ATEXP14, expansin A14, ATHEXP ALPHA 1.5, EXPANSIN 14, expansin A14 |
0.63 | 0.32 | -0.33 | ||
26 | AT3G18170 | Glycosyltransferase family 61 protein | 0.63 | 0.31 | -0.32 | |||
27 | AT3G43100 | transposable element gene | -0.62 | 0.31 | -0.29 | |||
28 | AT1G47280 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.31 | -0.27 | |||
29 | AT5G02680 | LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to 252 proteins in 89 species: Archae - 0; Bacteria - 71; Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.62 | 0.31 | -0.3 | |||
30 | AT4G04650 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.62 | 0.31 | -0.31 | |||
31 | AT2G14835 | RING/U-box superfamily protein | 0.61 | 0.3 | -0.31 | |||
32 | AT1G05770 | Mannose-binding lectin superfamily protein | 0.61 | 0.32 | -0.31 | |||
33 | AT5G55310 | DNA topoisomerase 1 beta | TOPOISOMERASE 1, DNA topoisomerase 1 beta |
-0.61 | 0.32 | -0.33 | ||
34 | AT1G34140 | poly(A) binding protein 1 | poly(A) binding protein 1 | -0.61 | 0.32 | -0.31 | ||
35 | AT1G36095 | DNA binding | -0.6 | 0.32 | -0.33 | |||
36 | AT3G06190 | BTB-POZ and MATH domain 2 | BTB-POZ AND MATH DOMAIN 2, BTB-POZ and MATH domain 2 |
0.6 | 0.31 | -0.32 | ||
37 | AT5G45090 | phloem protein 2-A7 | phloem protein 2-A7, phloem protein 2-A7 |
-0.6 | 0.31 | -0.32 | ||
38 | AT3G29390 | RS2-interacting KH protein | RS2-interacting KH protein | -0.6 | 0.32 | -0.31 | ||
39 | ATMG00400 | hypothetical protein | ORF157 | -0.6 | 0.31 | -0.3 | ||
40 | AT5G65820 | Pentatricopeptide repeat (PPR) superfamily protein | -0.6 | 0.32 | -0.31 | |||
41 | AT4G02190 | Cysteine/Histidine-rich C1 domain family protein | 0.6 | 0.31 | -0.31 | |||
42 | AT2G42870 | phy rapidly regulated 1 | HELIX-LOOP-HELIX 1, PHY RAPIDLY REGULATED 1 |
0.6 | 0.34 | -0.29 | ||
43 | AT4G33870 | Peroxidase superfamily protein | -0.6 | 0.32 | -0.33 | |||
44 | AT3G11500 | Small nuclear ribonucleoprotein family protein | 0.59 | 0.29 | -0.33 | |||
45 | AT1G69790 | Protein kinase superfamily protein | -0.59 | 0.33 | -0.29 | |||
46 | AT5G06100 | myb domain protein 33 | ATMYB33, myb domain protein 33 | -0.59 | 0.3 | -0.3 | ||
47 | AT2G26280 | CTC-interacting domain 7 | CTC-interacting domain 7 | -0.59 | 0.34 | -0.3 | ||
48 | AT2G22390 | pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum} |
ATRABA4E, RAB GTPase homolog A4E | -0.59 | 0.31 | -0.31 | ||
49 | AT4G21326 | subtilase 3.12 | subtilase 3.12, subtilase 3.12 | -0.59 | 0.31 | -0.3 | ||
50 | AT2G25760 | Protein kinase family protein | -0.59 | 0.3 | -0.32 | |||
51 | AT5G28170 | transposable element gene | -0.59 | 0.32 | -0.32 | |||
52 | AT2G46560 | transducin family protein / WD-40 repeat family protein | -0.59 | 0.31 | -0.31 | |||
53 | AT1G33360 | ATP-dependent Clp protease | -0.59 | 0.3 | -0.29 | |||
54 | AT1G29180 | Cysteine/Histidine-rich C1 domain family protein | 0.59 | 0.31 | -0.31 | |||
55 | AT2G36400 | growth-regulating factor 3 | growth-regulating factor 3, growth-regulating factor 3 |
0.58 | 0.31 | -0.31 | ||
56 | AT1G09190 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.58 | 0.31 | -0.31 | |||
57 | AT3G28890 | receptor like protein 43 | receptor like protein 43, receptor like protein 43 |
-0.58 | 0.33 | -0.33 | ||
58 | AT1G41900 | transposable element gene | -0.58 | 0.32 | -0.3 | |||
59 | AT5G37610 | Eukaryotic porin family protein | -0.58 | 0.31 | -0.31 | |||
60 | AT5G20940 | Glycosyl hydrolase family protein | -0.58 | 0.31 | -0.33 | |||
61 | AT1G11610 | cytochrome P450, family 71, subfamily A, polypeptide 18 | cytochrome P450, family 71, subfamily A, polypeptide 18 |
-0.58 | 0.3 | -0.33 | ||
62 | AT3G28430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
-0.57 | 0.33 | -0.32 | |||
63 | AT1G69430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
64 | AT1G60270 | beta glucosidase 6 | beta glucosidase 6 | -0.57 | 0.32 | -0.34 | ||
65 | AT2G36370 | ubiquitin-protein ligases | -0.56 | 0.34 | -0.3 | |||
66 | AT5G19660 | SITE-1 protease | SITE-1 PROTEASE, ATSBT6.1, SITE-1 protease |
-0.56 | 0.32 | -0.33 | ||
67 | AT2G06110 | transposable element gene | -0.56 | 0.32 | -0.31 | |||
68 | AT2G11270 | citrate synthase-related | -0.56 | 0.33 | -0.31 | |||
69 | AT1G63490 | transcription factor jumonji (jmjC) domain-containing protein |
-0.55 | 0.33 | -0.31 | |||
70 | AT2G32950 | Transducin/WD40 repeat-like superfamily protein | ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1, CONSTITUTIVE PHOTOMORPHOGENIC 1, DEETIOLATED MUTANT 340, EMBRYO DEFECTIVE 168, FUSCA 1 |
-0.55 | 0.3 | -0.31 | ||
71 | AT4G02430 | RNA-binding (RRM/RBD/RNP motifs) family protein | Serine/Arginine-Rich Protein Splicing Factor 34b, Serine/Arginine-Rich Protein Splicing Factor 34b |
-0.55 | 0.29 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
72 | C0211 | PR_MST_2158.8 | - | - | - | -0.65 | 0.45 | -0.46 |