AT2G28660 : -
Query Information
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AGICode AT2G28660
Description Chloroplast-targeted copper chaperone protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28660 Chloroplast-targeted copper chaperone protein 1 0.31 -0.32
2 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.79 0.32 -0.29
3 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.77 0.32 -0.3
4 AT1G29980 Protein of unknown function, DUF642 0.75 0.31 -0.3
5 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.74 0.34 -0.32
6 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.74 0.33 -0.31
7 AT5G65650 Protein of unknown function (DUF1195) 0.73 0.31 -0.33
8 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.73 0.31 -0.34
9 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 -0.72 0.29 -0.3
10 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.72 0.34 -0.32
11 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.32 -0.32
12 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein 0.71 0.31 -0.32
13 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.71 0.3 -0.32
14 AT4G25650 ACD1-like ACD1-like,
PROTOCHLOROPHYLLIDE-DEPENDENT
TRANSLOCON COMPONENT, 52 KDA,
TRANSLOCON AT THE INNER ENVELOPE
MEMBRANE OF CHLOROPLASTS, 55 KDA -
IV		 -0.71 0.3 -0.3
15 AT2G23760 BEL1-like homeodomain 4 BEL1-like homeodomain 4, SAWTOOTH
2		 -0.71 0.32 -0.32
16 AT2G19990 pathogenesis-related protein-1-like pathogenesis-related
protein-1-like		 0.7 0.32 -0.31
17 AT2G28190 copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase
2, COPPER/ZINC SUPEROXIDE
DISMUTASE 2		 0.7 0.31 -0.32
18 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 0.69 0.32 -0.32
19 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.69 0.3 -0.32
20 AT2G44270 repressor of lrx1 repressor of lrx1 0.69 0.31 -0.33
21 AT2G35120 Single hybrid motif superfamily protein 0.69 0.3 -0.3
22 AT1G34340 alpha/beta-Hydrolases superfamily protein -0.68 0.32 -0.33
23 AT2G37130 Peroxidase superfamily protein 0.68 0.31 -0.31
24 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 0.68 0.3 -0.32
25 AT1G68570 Major facilitator superfamily protein -0.68 0.31 -0.31
26 AT1G24735 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.32 -0.33
27 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein -0.68 0.32 -0.32
28 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 0.67 0.34 -0.32
29 AT2G21340 MATE efflux family protein -0.67 0.3 -0.32
30 AT1G44830 Integrase-type DNA-binding superfamily protein 0.67 0.32 -0.33
31 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein -0.67 0.31 -0.32
32 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 -0.67 0.31 -0.29
33 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.67 0.31 -0.31
34 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.67 0.31 -0.32
35 AT4G02630 Protein kinase superfamily protein -0.67 0.31 -0.32
36 AT2G18590 Major facilitator superfamily protein -0.67 0.31 -0.34
37 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 -0.66 0.31 -0.29
38 AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.66 0.31 -0.32
39 AT5G55140 ribosomal protein L30 family protein 0.66 0.31 -0.29
40 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.66 0.32 -0.32
41 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.66 0.32 -0.32
42 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 -0.66 0.34 -0.34
43 AT4G22720 Actin-like ATPase superfamily protein 0.66 0.32 -0.31
44 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.66 0.31 -0.34
45 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 -0.66 0.3 -0.34
46 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 -0.65 0.31 -0.31
47 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.65 0.32 -0.32
48 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.65 0.32 -0.32
49 AT2G21590 Glucose-1-phosphate adenylyltransferase family protein APL4 -0.65 0.32 -0.32
50 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 -0.65 0.32 -0.32
51 AT1G76360 Protein kinase superfamily protein -0.65 0.31 -0.31
52 AT3G02130 receptor-like protein kinase 2 clv3 peptide insensitive 1,
receptor-like protein kinase 2,
TOADSTOOL 2		 -0.65 0.32 -0.31
53 AT3G22380 time for coffee TIME FOR COFFEE -0.65 0.31 -0.33
54 AT1G70900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits
to 57 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.33
55 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.65 0.27 -0.32
56 AT5G20820 SAUR-like auxin-responsive protein family 0.65 0.33 -0.31
57 AT1G50060 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.65 0.3 -0.32
58 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 0.65 0.31 -0.32
59 AT4G14090 UDP-Glycosyltransferase superfamily protein -0.64 0.3 -0.32
60 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 0.64 0.36 -0.32
61 AT5G26110 Protein kinase superfamily protein 0.64 0.32 -0.31
62 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.64 0.32 -0.33
63 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 -0.64 0.32 -0.31
64 AT2G37260 WRKY family transcription factor family protein ATWRKY44, DR. STRANGELOVE 1,
TRANSPARENT TESTA GLABRA 2, WRKY44		 -0.64 0.31 -0.31
65 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 -0.64 0.34 -0.32
66 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.64 0.31 -0.32
67 AT3G45680 Major facilitator superfamily protein -0.64 0.31 -0.31
68 AT5G17220 glutathione S-transferase phi 12 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 12, GLUTATHIONE
S-TRANSFERASE 26, glutathione
S-transferase phi 12, TRANSPARENT
TESTA 19		 -0.64 0.33 -0.3
69 AT1G72200 RING/U-box superfamily protein 0.64 0.31 -0.31
70 AT2G15520 transposable element gene -0.63 0.31 -0.3
71 AT5G42800 dihydroflavonol 4-reductase dihydroflavonol 4-reductase, M318,
TT3		 -0.63 0.3 -0.33
72 AT3G62860 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.34
73 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.63 0.3 -0.32
74 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 -0.63 0.3 -0.31
75 AT1G66510 AAR2 protein family 0.63 0.31 -0.33
76 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 0.63 0.33 -0.31
77 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 -0.63 0.33 -0.3
78 AT5G47550 Cystatin/monellin superfamily protein 0.63 0.32 -0.32
79 AT1G37000 Beta-galactosidase related protein -0.62 0.32 -0.34
80 AT5G19340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits
to 906 proteins in 61 species: Archae - 0; Bacteria - 4;
Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other
Eukaryotes - 766 (source: NCBI BLink).		 0.62 0.29 -0.33
81 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 -0.62 0.33 -0.31
82 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 -0.62 0.32 -0.29
83 AT5G62100 BCL-2-associated athanogene 2 BCL-2-associated athanogene 2,
BCL-2-associated athanogene 2		 -0.62 0.31 -0.31
84 AT5G13960 SU(VAR)3-9 homolog 4 KRYPTONITE, SET DOMAIN PROTEIN 33,
SU(VAR)3-9 homolog 4		 0.62 0.33 -0.3
85 AT3G60190 DYNAMIN-like 1E DYNAMIN-like 1E, ARABIDOPSIS
DYNAMIN-LIKE 4, DYNAMIN-LIKE
PROTEIN 2, DYNAMIN-like 1E,
DYNAMIN-RELATED PROTEIN 1E,
ENHANCED DISEASE RESISTANCE 3		 -0.61 0.33 -0.32
86 AT3G09690 alpha/beta-Hydrolases superfamily protein 0.61 0.32 -0.31
87 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.61 0.29 -0.3
88 AT1G10090 Early-responsive to dehydration stress protein (ERD4) -0.61 0.32 -0.29
89 AT2G16990 Major facilitator superfamily protein -0.61 0.32 -0.34
90 AT1G79260 CONTAINS InterPro DOMAIN/s: Domain of unknown function
DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.33 -0.32
91 AT2G39540 Gibberellin-regulated family protein -0.61 0.31 -0.32
92 AT5G52660 Homeodomain-like superfamily protein -0.61 0.31 -0.33
93 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.61 0.34 -0.31
94 ATCG00790 ribosomal protein L16 ribosomal protein L16 -0.61 0.34 -0.32
95 AT4G40060 homeobox protein 16 ATHB-16, homeobox protein 16,
homeobox protein 16		 0.61 0.32 -0.29
96 AT3G27620 alternative oxidase 1C alternative oxidase 1C 0.61 0.34 -0.3
97 AT4G31410 Protein of unknown function (DUF1644) -0.61 0.32 -0.31
98 AT1G80450 VQ motif-containing protein -0.61 0.31 -0.33
99 AT2G24520 H(+)-ATPase 5 H(+)-ATPase 5, H(+)-ATPase 5 -0.61 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
100 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.81 0.47 -0.41 C0109
101 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.78 0.44 -0.42 C0107
102 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.7 0.45 -0.43 C0210
103 C0103 Glutaric acid - - - 0.66 0.47 -0.47