AGICode | AT2G22125 |
Description | binding |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G22125 | binding | cellulose synthase-interactive protein 1, POM-POM 2 |
1 | 0.32 | -0.31 | ||
2 | AT3G57890 | Tubulin binding cofactor C domain-containing protein | 0.84 | 0.33 | -0.32 | |||
3 | AT2G21440 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.8 | 0.3 | -0.33 | |||
4 | AT1G24440 | RING/U-box superfamily protein | -0.8 | 0.3 | -0.32 | |||
5 | AT2G24050 | MIF4G domain-containing protein / MA3 domain-containing protein |
eukaryotic translation Initiation Factor isoform 4G2 |
0.79 | 0.31 | -0.31 | ||
6 | AT2G36630 | Sulfite exporter TauE/SafE family protein | 0.79 | 0.28 | -0.3 | |||
7 | AT1G09620 | ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases |
0.79 | 0.32 | -0.33 | |||
8 | AT1G29470 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.78 | 0.31 | -0.29 | |||
9 | AT5G19820 | ARM repeat superfamily protein | embryo defective 2734 | 0.78 | 0.31 | -0.32 | ||
10 | AT2G04280 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.78 | 0.3 | -0.33 | |||
11 | AT3G59020 | ARM repeat superfamily protein | 0.77 | 0.33 | -0.32 | |||
12 | AT3G54400 | Eukaryotic aspartyl protease family protein | 0.77 | 0.3 | -0.31 | |||
13 | AT1G06950 | translocon at the inner envelope membrane of chloroplasts 110 |
ARABIDOPSIS THALIANA TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110, translocon at the inner envelope membrane of chloroplasts 110 |
0.77 | 0.31 | -0.3 | ||
14 | AT1G29880 | glycyl-tRNA synthetase / glycine--tRNA ligase | 0.77 | 0.32 | -0.3 | |||
15 | AT4G32410 | cellulose synthase 1 | CELLULOSE SYNTHASE 1, cellulose synthase 1, RADIALLY SWOLLEN 1 |
0.76 | 0.31 | -0.32 | ||
16 | AT4G38880 | GLN phosphoribosyl pyrophosphate amidotransferase 3 | GLN phosphoribosyl pyrophosphate amidotransferase 3, GLN phosphoribosyl pyrophosphate amidotransferase 3 |
0.76 | 0.32 | -0.32 | ||
17 | AT2G38180 | SGNH hydrolase-type esterase superfamily protein | 0.76 | 0.32 | -0.3 | |||
18 | AT4G13750 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
EMBRYO DEFECTIVE 2597, NO VEIN | 0.76 | 0.32 | -0.31 | ||
19 | AT4G38710 | glycine-rich protein | 0.76 | 0.31 | -0.32 | |||
20 | AT2G40400 | Protein of unknown function (DUF399 and DUF3411) | 0.76 | 0.3 | -0.32 | |||
21 | AT3G56150 | eukaryotic translation initiation factor 3C | ATEIF3C-1, ATTIF3C1, eukaryotic translation initiation factor 3C, EIF3C-1, TIF3C1 |
0.76 | 0.32 | -0.3 | ||
22 | AT5G10840 | Endomembrane protein 70 protein family | 0.76 | 0.32 | -0.31 | |||
23 | AT2G04030 | Chaperone protein htpG family protein | HEAT SHOCK PROTEIN 90.5, CR88, EMBRYO DEFECTIVE 1956, HEAT SHOCK PROTEIN 88.1, HEAT SHOCK PROTEIN 90.5 |
0.75 | 0.32 | -0.31 | ||
24 | AT5G64420 | DNA polymerase V family | 0.75 | 0.33 | -0.32 | |||
25 | AT1G10290 | dynamin-like protein 6 | dynamin-like protein 6, DYNAMIN-RELATED PROTEIN 2A |
0.75 | 0.31 | -0.32 | ||
26 | AT5G64290 | dicarboxylate transport 2.1 | DCT, dicarboxylate transport 2.1 | 0.75 | 0.32 | -0.32 | ||
27 | AT3G54540 | general control non-repressible 4 | ATP-binding cassette F4, general control non-repressible 4, general control non-repressible 4 |
0.75 | 0.32 | -0.32 | ||
28 | AT5G64740 | cellulose synthase 6 | cellulose synthase 6, E112, ISOXABEN RESISTANT 2, PROCUSTE 1 |
0.75 | 0.31 | -0.32 | ||
29 | AT1G63810 | CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). |
0.74 | 0.31 | -0.31 | |||
30 | AT4G33650 | dynamin-related protein 3A | ARABIDOPSIS DYNAMIN-LIKE 2, ABERRANT PEROXISOME MORPHOLOGY 1, dynamin-related protein 3A |
0.74 | 0.31 | -0.3 | ||
31 | AT3G26370 | O-fucosyltransferase family protein | 0.74 | 0.32 | -0.3 | |||
32 | AT1G14650 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein |
0.74 | 0.32 | -0.3 | |||
33 | AT3G07060 | NHL domain-containing protein | embryo defective 1974 | 0.74 | 0.29 | -0.33 | ||
34 | AT5G41790 | COP1-interactive protein 1 | COP1-interactive protein 1 | 0.74 | 0.35 | -0.3 | ||
35 | AT5G61970 | signal recognition particle-related / SRP-related | 0.74 | 0.31 | -0.31 | |||
36 | AT4G14360 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.74 | 0.31 | -0.28 | |||
37 | AT5G12200 | pyrimidine 2 | pyrimidine 2 | -0.73 | 0.32 | -0.29 | ||
38 | AT2G21390 | Coatomer, alpha subunit | 0.73 | 0.32 | -0.31 | |||
39 | AT3G61240 | DEA(D/H)-box RNA helicase family protein | 0.73 | 0.31 | -0.34 | |||
40 | AT1G79090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.73 | 0.32 | -0.3 | |||
41 | AT5G18170 | glutamate dehydrogenase 1 | glutamate dehydrogenase 1 | -0.73 | 0.33 | -0.32 | ||
42 | AT1G48650 | DEA(D/H)-box RNA helicase family protein | 0.73 | 0.32 | -0.31 | |||
43 | AT4G31210 | DNA topoisomerase, type IA, core | 0.73 | 0.32 | -0.32 | |||
44 | AT2G41960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast hits to 7260 proteins in 458 species: Archae - 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses - 38; Other Eukaryotes - 4487 (source: NCBI BLink). |
0.73 | 0.34 | -0.34 | |||
45 | AT5G13270 | Pentatricopeptide repeat (PPR) superfamily protein | REQUIRED FOR ACCD RNA EDITING 1 | 0.73 | 0.31 | -0.31 | ||
46 | AT1G20960 | U5 small nuclear ribonucleoprotein helicase, putative | embryo defective 1507 | 0.73 | 0.29 | -0.31 | ||
47 | AT5G17270 | Protein prenylyltransferase superfamily protein | 0.72 | 0.32 | -0.34 | |||
48 | AT2G32730 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
0.72 | 0.3 | -0.29 | |||
49 | AT5G49910 | chloroplast heat shock protein 70-2 | chloroplast heat shock protein 70-2, HEAT SHOCK PROTEIN 70-7 |
0.72 | 0.32 | -0.31 | ||
50 | AT2G20190 | CLIP-associated protein | CLIP-ASSOCIATED PROTEIN, CLIP-associated protein |
0.72 | 0.31 | -0.33 | ||
51 | AT1G49040 | stomatal cytokinesis defective / SCD1 protein (SCD1) | STOMATAL CYTOKINESIS-DEFECTIVE 1 | 0.72 | 0.32 | -0.31 | ||
52 | AT3G47520 | malate dehydrogenase | malate dehydrogenase, plastidic NAD-dependent malate dehydrogenase |
0.71 | 0.33 | -0.31 | ||
53 | AT2G15230 | lipase 1 | lipase 1, lipase 1 | -0.71 | 0.31 | -0.32 | ||
54 | AT4G31160 | DDB1-CUL4 associated factor 1 | DDB1-CUL4 associated factor 1 | 0.71 | 0.31 | -0.3 | ||
55 | AT1G55930 | CBS domain-containing protein / transporter associated domain-containing protein |
0.71 | 0.3 | -0.3 | |||
56 | AT3G15760 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.31 | -0.33 | |||
57 | AT1G14560 | Mitochondrial substrate carrier family protein | 0.71 | 0.33 | -0.32 | |||
58 | AT1G15010 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.33 | |||
59 | AT3G52070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.31 | |||
60 | AT5G60920 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
COBRA | 0.71 | 0.3 | -0.29 | ||
61 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
0.71 | 0.3 | -0.3 | ||
62 | AT1G78930 | Mitochondrial transcription termination factor family protein |
0.7 | 0.32 | -0.33 | |||
63 | AT2G28520 | vacuolar proton ATPase A1 | vacuolar proton ATPase A1 | 0.7 | 0.32 | -0.3 | ||
64 | AT4G37130 | hydroxyproline-rich glycoprotein family protein | 0.7 | 0.33 | -0.31 | |||
65 | AT2G20290 | myosin-like protein XIG | MYOSIN XI G, myosin-like protein XIG |
0.7 | 0.32 | -0.31 | ||
66 | AT3G54980 | Pentatricopeptide repeat (PPR) superfamily protein | 0.7 | 0.31 | -0.31 | |||
67 | AT3G18640 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.7 | 0.33 | -0.34 | |||
68 | AT2G35620 | Leucine-rich repeat protein kinase family protein | FEI 2 | 0.7 | 0.33 | -0.32 | ||
69 | AT1G80180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.31 | -0.29 | |||
70 | AT1G74260 | purine biosynthesis 4 | purine biosynthesis 4 | 0.7 | 0.32 | -0.33 | ||
71 | AT3G23820 | UDP-D-glucuronate 4-epimerase 6 | UDP-D-glucuronate 4-epimerase 6 | 0.7 | 0.31 | -0.33 | ||
72 | AT5G20360 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
Phox3 | 0.69 | 0.33 | -0.31 | ||
73 | AT2G05120 | Nucleoporin, Nup133/Nup155-like | 0.69 | 0.32 | -0.34 | |||
74 | AT1G62020 | Coatomer, alpha subunit | 0.69 | 0.31 | -0.31 | |||
75 | AT3G27390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.32 | -0.32 | |||
76 | AT1G80410 | tetratricopeptide repeat (TPR)-containing protein | EMBRYO DEFECTIVE 2753, OMISHA | 0.69 | 0.32 | -0.32 | ||
77 | AT3G12050 | Aha1 domain-containing protein | 0.69 | 0.3 | -0.32 | |||
78 | AT5G20200 | nucleoporin-related | 0.69 | 0.32 | -0.33 | |||
79 | AT1G47240 | NRAMP metal ion transporter 2 | ATNRAMP2, NRAMP metal ion transporter 2 |
0.69 | 0.31 | -0.3 | ||
80 | AT1G18070 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
0.69 | 0.32 | -0.34 | |||
81 | AT5G10020 | Leucine-rich receptor-like protein kinase family protein | 0.69 | 0.31 | -0.32 | |||
82 | AT2G32030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.68 | 0.33 | -0.32 | |||
83 | AT3G02340 | RING/U-box superfamily protein | -0.67 | 0.31 | -0.33 | |||
84 | AT3G23570 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.31 | -0.32 | |||
85 | AT2G34470 | urease accessory protein G | PSKF109, urease accessory protein G |
-0.65 | 0.32 | -0.31 | ||
86 | AT4G27280 | Calcium-binding EF-hand family protein | -0.65 | 0.32 | -0.33 | |||
87 | AT1G33760 | Integrase-type DNA-binding superfamily protein | -0.65 | 0.3 | -0.3 | |||
88 | AT1G22985 | Integrase-type DNA-binding superfamily protein | cytokinin response factor 7 | -0.65 | 0.32 | -0.32 | ||
89 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | -0.64 | 0.34 | -0.3 | |||
90 | AT3G21780 | UDP-glucosyl transferase 71B6 | UDP-glucosyl transferase 71B6 | -0.64 | 0.32 | -0.32 | ||
91 | AT4G28400 | Protein phosphatase 2C family protein | -0.64 | 0.31 | -0.32 | |||
92 | AT1G01160 | GRF1-interacting factor 2 | GRF1-interacting factor 2 | -0.63 | 0.31 | -0.34 | ||
93 | AT5G02020 | Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). |
Salt Induced Serine rich | -0.63 | 0.32 | -0.31 | ||
94 | AT3G46620 | zinc finger (C3HC4-type RING finger) family protein | -0.62 | 0.31 | -0.31 | |||
95 | AT3G20550 | SMAD/FHA domain-containing protein | DAWDLE | -0.62 | 0.32 | -0.3 | ||
96 | AT2G18470 | roline-rich extensin-like receptor kinase 4 | proline-rich extensin-like receptor kinase 4, proline-rich extensin-like receptor kinase 4 |
-0.62 | 0.33 | -0.32 | ||
97 | AT5G12310 | RING/U-box superfamily protein | -0.62 | 0.32 | -0.3 | |||
98 | AT5G42370 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.61 | 0.31 | -0.34 | |||
99 | AT1G76560 | CP12 domain-containing protein 3 | CP12 domain-containing protein 3 | -0.61 | 0.3 | -0.31 | ||
100 | AT1G69630 | F-box/RNI-like superfamily protein | -0.6 | 0.31 | -0.32 | |||
101 | AT1G25375 | Metallo-hydrolase/oxidoreductase superfamily protein | -0.6 | 0.31 | -0.31 | |||
102 | AT5G45340 | cytochrome P450, family 707, subfamily A, polypeptide 3 | cytochrome P450, family 707, subfamily A, polypeptide 3 |
-0.6 | 0.31 | -0.31 | ||
103 | AT4G11280 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 |
-0.59 | 0.32 | -0.31 | ||
104 | AT4G27652 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27657.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.31 | -0.32 | |||
105 | AT3G55980 | salt-inducible zinc finger 1 | ATSZF1, salt-inducible zinc finger 1 |
-0.58 | 0.32 | -0.3 | ||
106 | AT3G15210 | ethylene responsive element binding factor 4 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4, ethylene responsive element binding factor 4, RELATED TO AP2 5 |
-0.58 | 0.32 | -0.29 | ||
107 | AT4G14060 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.58 | 0.32 | -0.32 | |||
108 | AT2G40000 | ortholog of sugar beet HS1 PRO-1 2 | ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, ortholog of sugar beet HS1 PRO-1 2 |
-0.58 | 0.31 | -0.31 | ||
109 | AT5G59550 | zinc finger (C3HC4-type RING finger) family protein | -0.58 | 0.31 | -0.34 | |||
110 | AT5G53220 | unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
-0.58 | 0.33 | -0.33 | |||
111 | AT1G53060 | Legume lectin family protein | -0.58 | 0.31 | -0.31 | |||
112 | AT5G10750 | Protein of unknown function (DUF1336) | -0.57 | 0.31 | -0.31 | |||
113 | AT2G39100 | RING/U-box superfamily protein | -0.57 | 0.3 | -0.3 | |||
114 | AT2G44000 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.57 | 0.31 | -0.33 | |||
115 | AT4G31270 | sequence-specific DNA binding transcription factors | -0.57 | 0.32 | -0.33 | |||
116 | AT5G56610 | Phosphotyrosine protein phosphatases superfamily protein | -0.57 | 0.3 | -0.31 | |||
117 | AT3G23230 | Integrase-type DNA-binding superfamily protein | -0.57 | 0.32 | -0.3 | |||
118 | AT2G25200 | Plant protein of unknown function (DUF868) | -0.57 | 0.3 | -0.31 | |||
119 | AT1G72920 | Toll-Interleukin-Resistance (TIR) domain family protein | -0.57 | 0.32 | -0.33 | |||
120 | AT3G47610 | transcription regulators;zinc ion binding | -0.57 | 0.29 | -0.34 | |||
121 | AT4G27657 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
122 | AT2G34560 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.57 | 0.32 | -0.31 | |||
123 | AT3G46600 | GRAS family transcription factor | -0.57 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
124 | C0045 | 7-Methylthio-n-heptylglucosinolate | - | 7-Methylthioheptyl glucosinolate | glucosinolate biosynthesis from pentahomomethionine | 0.74 | 0.31 | -0.31 | ||
125 | C0173 | MST_2301.7 | - | - | - | 0.71 | 0.46 | -0.47 |