AT2G04000 : -
Query Information
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AGICode AT2G04000
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G04000 transposable element gene 1 0.3 -0.32
2 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 -0.73 0.33 -0.3
3 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 0.72 0.32 -0.33
4 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 -0.69 0.31 -0.29
5 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.69 0.32 -0.33
6 AT3G43120 SAUR-like auxin-responsive protein family -0.69 0.3 -0.27
7 AT3G19880 F-box and associated interaction domains-containing protein -0.68 0.32 -0.32
8 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 0.68 0.3 -0.31
9 AT5G38260 Protein kinase superfamily protein -0.68 0.3 -0.32
10 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 0.68 0.32 -0.31
11 AT1G59630 F-box associated ubiquitination effector family protein 0.68 0.34 -0.31
12 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.32 -0.32
13 AT5G14890 NHL domain-containing protein 0.67 0.31 -0.31
14 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.31 -0.31
15 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 -0.66 0.33 -0.29
16 AT3G28560 BCS1 AAA-type ATPase 0.66 0.32 -0.31
17 AT1G35380 transposable element gene 0.65 0.31 -0.29
18 AT3G29430 Terpenoid synthases superfamily protein 0.65 0.31 -0.31
19 AT3G28840 Protein of unknown function (DUF1216) 0.65 0.32 -0.31
20 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 -0.65 0.31 -0.33
21 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 0.65 0.31 -0.31
22 AT1G76710 SET domain group 26 ASH1 RELATED PROTEIN 1,
ASH1-RELATED PROTEIN 1, SET domain
group 26		 -0.65 0.3 -0.32
23 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein -0.64 0.33 -0.3
24 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.31
25 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 -0.64 0.3 -0.32
26 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein -0.64 0.33 -0.32
27 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.64 0.29 -0.31
28 AT1G76290 AMP-dependent synthetase and ligase family protein -0.64 0.31 -0.3
29 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.63 0.33 -0.31
30 AT1G35970 transposable element gene -0.63 0.35 -0.31
31 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT -0.63 0.32 -0.3
32 AT3G42100 transposable element gene -0.63 0.32 -0.32
33 AT3G22070 proline-rich family protein 0.63 0.32 -0.31
34 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 -0.63 0.32 -0.32
35 AT1G58410 Disease resistance protein (CC-NBS-LRR class) family -0.63 0.34 -0.33
36 AT2G16760 Calcium-dependent phosphotriesterase superfamily protein -0.63 0.33 -0.3
37 AT1G20280 homeobox-leucine zipper protein-related -0.63 0.32 -0.29
38 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein -0.63 0.28 -0.32
39 AT2G40750 WRKY DNA-binding protein 54 WRKY DNA-BINDING PROTEIN 54, WRKY
DNA-binding protein 54		 0.62 0.3 -0.31
40 AT5G27220 Frigida-like protein -0.62 0.32 -0.34
41 AT1G61750 Receptor-like protein kinase-related family protein 0.62 0.3 -0.33
42 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.3 -0.32
43 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 -0.61 0.3 -0.3
44 AT4G17690 Peroxidase superfamily protein 0.61 0.32 -0.31
45 AT3G62230 F-box family protein DUO1-activated F-box 1 0.61 0.34 -0.29
46 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 0.61 0.31 -0.32
47 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.61 0.31 -0.29
48 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein 0.61 0.3 -0.33
49 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.32 -0.33
50 AT5G37420 Family of unknown function (DUF577) -0.61 0.33 -0.3
51 AT3G50120 Plant protein of unknown function (DUF247) 0.61 0.3 -0.35
52 AT3G57460 catalytics;metal ion binding 0.61 0.31 -0.34
53 AT2G23480 transposable element gene 0.61 0.3 -0.33
54 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.61 0.31 -0.3
55 AT3G16020 F-box associated ubiquitination effector protein -0.61 0.3 -0.3
56 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 0.61 0.31 -0.32
57 AT3G32220 transposable element gene 0.61 0.32 -0.34
58 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.61 0.3 -0.33
59 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.61 0.3 -0.31
60 AT1G23560 Domain of unknown function (DUF220) -0.6 0.32 -0.31
61 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.33 -0.32
62 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 0.6 0.3 -0.31
63 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.32 -0.31
64 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 0.6 0.31 -0.32
65 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 -0.6 0.31 -0.3
66 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 0.6 0.31 -0.32
67 AT4G15730 CW-type Zinc Finger -0.6 0.31 -0.32
68 AT1G03280 Transcription factor TFIIE, alpha subunit -0.6 0.31 -0.31
69 AT1G28135 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 7 Blast hits to 7 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.31
70 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.3 -0.32
71 AT5G59740 UDP-N-acetylglucosamine (UAA) transporter family -0.6 0.32 -0.32
72 AT1G02575 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02570.1).		 -0.6 0.34 -0.3
73 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 -0.6 0.33 -0.32
74 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.31 -0.32
75 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.6 0.32 -0.32
76 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.3 -0.3
77 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.32 -0.31
78 AT2G18780 F-box and associated interaction domains-containing protein -0.59 0.3 -0.31
79 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 0.59 0.3 -0.32
80 AT2G04032 zinc transporter 7 precursor zinc transporter 7 precursor 0.59 0.3 -0.31
81 AT3G24680 transposable element gene -0.59 0.29 -0.33
82 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 -0.59 0.31 -0.34
83 AT3G13140 hydroxyproline-rich glycoprotein family protein 0.59 0.31 -0.32
84 AT4G13510 ammonium transporter 1;1 ammonium transporter 1;1,
ARABIDOPSIS THALIANA AMMONIUM
TRANSPORT 1, ATAMT1;1		 0.59 0.32 -0.32
85 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.3 -0.31
86 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 -0.59 0.3 -0.3
87 AT1G49250 ATP-dependent DNA ligase -0.59 0.33 -0.32
88 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.59 0.31 -0.31
89 AT4G11970 YTH family protein -0.59 0.32 -0.31
90 AT1G69630 F-box/RNI-like superfamily protein 0.59 0.32 -0.33
91 AT5G24970 Protein kinase superfamily protein -0.59 0.3 -0.33
92 AT5G35150 transposable element gene -0.59 0.31 -0.3
93 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.59 0.3 -0.32
94 AT3G22060 Receptor-like protein kinase-related family protein 0.59 0.31 -0.3
95 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 0.58 0.32 -0.31
96 AT2G45610 alpha/beta-Hydrolases superfamily protein -0.58 0.29 -0.3
97 AT3G45690 Major facilitator superfamily protein -0.58 0.3 -0.29
98 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 0.58 0.32 -0.3
99 AT5G18910 Protein kinase superfamily protein -0.58 0.3 -0.31
100 AT3G07840 Pectin lyase-like superfamily protein -0.58 0.33 -0.32
101 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 -0.58 0.34 -0.32
102 AT5G24320 Transducin/WD40 repeat-like superfamily protein -0.58 0.32 -0.33
103 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.34 -0.31
104 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.3 -0.29
105 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 0.57 0.3 -0.33
106 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.57 0.31 -0.3
107 AT2G20620 Protein of unknown function (DUF626) 0.57 0.32 -0.3
108 AT1G28650 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.32 -0.33
109 AT3G30720 qua-quine starch QUA-QUINE STARCH 0.57 0.35 -0.32
110 AT2G24390 AIG2-like (avirulence induced gene) family protein 0.56 0.32 -0.31
111 AT3G10810 zinc finger (C3HC4-type RING finger) family protein -0.56 0.32 -0.32
112 AT3G42070 transposable element gene -0.56 0.31 -0.28
113 AT4G30230 unknown protein; Has 42 Blast hits to 42 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.31 -0.31
114 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.56 0.32 -0.3
115 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 0.56 0.33 -0.3
116 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 0.56 0.32 -0.33
117 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 -0.56 0.33 -0.31
118 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 0.56 0.32 -0.31
119 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.32 -0.3
120 AT2G25420 transducin family protein / WD-40 repeat family protein -0.56 0.31 -0.31
121 AT5G66660 Protein of unknown function (DUF677) -0.56 0.33 -0.32
122 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 0.55 0.33 -0.29
123 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.33
124 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.55 0.32 -0.32
125 AT2G18650 RING/U-box superfamily protein maternal effect embryo arrest 16 0.54 0.3 -0.32
126 AT2G30960 unknown protein; Has 4906 Blast hits to 2903 proteins in
334 species: Archae - 5; Bacteria - 381; Metazoa - 1639;
Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes -
2123 (source: NCBI BLink).		 0.54 0.34 -0.32
127 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.33 -0.33
128 AT1G63590 Receptor-like protein kinase-related family protein 0.54 0.35 -0.3
129 AT3G12910 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.54 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0207 Phosphatidylglycerol-34:5 - - - 0.74 0.45 -0.48