AT2G42580 : tetratricopetide-repeat thioredoxin-like 3
Query Information
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AGICode AT2G42580
Description tetratricopetide-repeat thioredoxin-like 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42580 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat
thioredoxin-like 3,
VHI-INTERACTING TPR CONTAINING
PROTEIN		 1 0.3 -0.33
2 AT5G51460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 ATTPPA 0.86 0.32 -0.3
3 AT3G11420 Protein of unknown function (DUF604) -0.86 0.31 -0.31
4 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 -0.84 0.29 -0.32
5 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.84 0.31 -0.32
6 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.83 0.3 -0.34
7 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.83 0.31 -0.31
8 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.82 0.32 -0.3
9 AT1G54100 aldehyde dehydrogenase 7B4 aldehyde dehydrogenase 7B4 -0.82 0.31 -0.33
10 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.82 0.32 -0.31
11 AT3G20250 pumilio 5 pumilio 5, pumilio 5 -0.81 0.32 -0.3
12 AT1G66940 protein kinase-related 0.81 0.31 -0.3
13 AT5G61130 plasmodesmata callose-binding protein 1 plasmodesmata callose-binding
protein 1		 0.8 0.31 -0.31
14 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.8 0.31 -0.34
15 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.79 0.33 -0.31
16 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.79 0.32 -0.31
17 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.79 0.32 -0.3
18 AT1G07040 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in
187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140
(source: NCBI BLink).		 -0.79 0.34 -0.32
19 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 0.78 0.31 -0.32
20 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.78 0.32 -0.33
21 AT1G17550 homology to ABI2 homology to ABI2 -0.78 0.34 -0.31
22 AT1G62480 Vacuolar calcium-binding protein-related 0.78 0.32 -0.3
23 AT1G30825 Arp2/3 complex, 34 kD subunit p34-Arc ACTIN-RELATED PROTEIN C2A,
DISTORTED TRICHOMES 2		 0.78 0.33 -0.3
24 AT1G08810 myb domain protein 60 myb domain protein 60, myb domain
protein 60		 0.78 0.32 -0.31
25 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 -0.78 0.29 -0.31
26 AT1G23030 ARM repeat superfamily protein 0.78 0.32 -0.32
27 AT3G05730 Encodes a defensin-like (DEFL) family protein. 0.78 0.29 -0.31
28 AT1G27460 no pollen germination related 1 no pollen germination related 1 0.77 0.32 -0.29
29 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.77 0.32 -0.33
30 AT3G06070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits
to 33 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.32 -0.32
31 AT3G06750 hydroxyproline-rich glycoprotein family protein 0.77 0.32 -0.32
32 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 0.77 0.32 -0.33
33 AT4G02360 Protein of unknown function, DUF538 -0.77 0.32 -0.31
34 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.77 0.33 -0.34
35 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.33 -0.32
36 AT1G09500 NAD(P)-binding Rossmann-fold superfamily protein -0.77 0.33 -0.32
37 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein 0.77 0.34 -0.31
38 AT4G26480 RNA-binding KH domain-containing protein 0.77 0.32 -0.33
39 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.77 0.32 -0.31
40 AT3G16670 Pollen Ole e 1 allergen and extensin family protein 0.77 0.33 -0.32
41 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E		 -0.76 0.31 -0.3
42 AT1G67300 Major facilitator superfamily protein -0.76 0.31 -0.32
43 AT3G54920 Pectin lyase-like superfamily protein powdery mildew resistant 6 0.76 0.31 -0.33
44 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.76 0.32 -0.32
45 AT1G14710 hydroxyproline-rich glycoprotein family protein 0.76 0.33 -0.32
46 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 0.76 0.33 -0.33
47 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.76 0.31 -0.33
48 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.76 0.31 -0.31
49 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 -0.76 0.33 -0.32
50 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.76 0.34 -0.33
51 AT2G40150 TRICHOME BIREFRINGENCE-LIKE 28 TRICHOME BIREFRINGENCE-LIKE 28 0.76 0.31 -0.32
52 AT5G16590 Leucine-rich repeat protein kinase family protein Leucine rich repeat protein 1 0.75 0.29 -0.3
53 AT1G71020 ARM repeat superfamily protein 0.75 0.32 -0.3
54 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.75 0.31 -0.31
55 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.75 0.31 -0.29
56 AT4G37150 methyl esterase 9 ARABIDOPSIS THALIANA METHYL
ESTERASE 9, methyl esterase 9		 -0.75 0.32 -0.32
57 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 0.75 0.32 -0.33
58 AT2G37470 Histone superfamily protein 0.75 0.3 -0.31
59 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 0.75 0.33 -0.32
60 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.75 0.33 -0.33
61 AT2G43130 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARA-4, ARA4, ATRAB11F, ARABIDOPSIS
RAB GTPASE HOMOLOG A5C, RABA5C		 0.75 0.31 -0.32
62 AT4G25870 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.75 0.32 -0.35
63 AT5G22580 Stress responsive A/B Barrel Domain 0.75 0.32 -0.31
64 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 -0.75 0.32 -0.33
65 AT4G21870 HSP20-like chaperones superfamily protein 0.75 0.31 -0.34
66 AT1G77450 NAC domain containing protein 32 NAC domain containing protein 32,
NAC domain containing protein 32		 -0.74 0.31 -0.32
67 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.74 0.31 -0.28
68 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.74 0.32 -0.32
69 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.74 0.33 -0.33
70 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 0.74 0.29 -0.3
71 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 -0.74 0.3 -0.34
72 AT5G57700 BNR/Asp-box repeat family protein 0.74 0.31 -0.31
73 AT2G33590 NAD(P)-binding Rossmann-fold superfamily protein -0.74 0.28 -0.32
74 AT5G07330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.74 0.32 -0.31
75 AT1G20220 Alba DNA/RNA-binding protein 0.74 0.32 -0.32
76 AT3G30250 transposable element gene 0.74 0.3 -0.32
77 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 0.74 0.33 -0.33
78 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.73 0.32 -0.32
79 AT3G58470 nucleic acid binding;methyltransferases 0.73 0.33 -0.33
80 AT2G30010 TRICHOME BIREFRINGENCE-LIKE 45 TRICHOME BIREFRINGENCE-LIKE 45 0.73 0.34 -0.34
81 AT3G19080 SWIB complex BAF60b domain-containing protein 0.73 0.32 -0.31
82 AT5G10730 NAD(P)-binding Rossmann-fold superfamily protein -0.73 0.3 -0.31
83 AT1G74910 ADP-glucose pyrophosphorylase family protein 0.73 0.29 -0.32
84 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.73 0.33 -0.32
85 AT1G69260 ABI five binding protein ABI five binding protein -0.73 0.29 -0.34
86 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.73 0.31 -0.32
87 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.73 0.33 -0.31
88 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.73 0.32 -0.31
89 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 -0.72 0.32 -0.34
90 AT3G48510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits
to 98 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.33
91 AT1G31750 proline-rich family protein -0.72 0.32 -0.32
92 AT4G19230 cytochrome P450, family 707, subfamily A, polypeptide 1 cytochrome P450, family 707,
subfamily A, polypeptide 1		 -0.72 0.32 -0.32
93 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS -0.72 0.3 -0.3
94 AT5G01300 PEBP (phosphatidylethanolamine-binding protein) family
protein		 -0.72 0.29 -0.31
95 AT2G18170 MAP kinase 7 MAP kinase 7, MAP kinase 7 -0.72 0.31 -0.31
96 AT1G79270 evolutionarily conserved C-terminal region 8 evolutionarily conserved
C-terminal region 8		 -0.72 0.31 -0.3
97 AT5G22290 NAC domain containing protein 89 NAC domain containing protein 89,
fructose-sensing quantitative
trait locus 6, NAC domain
containing protein 89		 -0.72 0.31 -0.32
98 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.31 -0.32
99 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 -0.72 0.3 -0.31
100 AT4G25000 alpha-amylase-like alpha-amylase-like, ATAMY1 -0.72 0.33 -0.3
101 AT1G04220 3-ketoacyl-CoA synthase 2 3-ketoacyl-CoA synthase 2 -0.72 0.33 -0.31
102 AT5G67340 ARM repeat superfamily protein -0.71 0.3 -0.32
103 AT4G34710 arginine decarboxylase 2 arginine decarboxylase 2, ATADC2,
SPE2		 -0.71 0.29 -0.3
104 AT5G63030 Thioredoxin superfamily protein glutaredoxin C1 -0.71 0.32 -0.29
105 AT1G73220 organic cation/carnitine transporter1 organic cation/carnitine
transporter1, organic
cation/carnitine transporter1		 -0.7 0.31 -0.31
106 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 -0.7 0.33 -0.31
107 AT4G33040 Thioredoxin superfamily protein -0.7 0.31 -0.3
108 AT2G25940 alpha-vacuolar processing enzyme alpha-vacuolar processing enzyme,
ALPHAVPE		 -0.7 0.31 -0.33
109 AT5G64510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 tunicamycin induced 1 -0.7 0.31 -0.31
110 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.7 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.81 0.49 -0.48 C0017