AGICode | AT2G24820 |
Description | translocon at the inner envelope membrane of chloroplasts 55-II |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G24820 | translocon at the inner envelope membrane of chloroplasts 55-II |
translocon at the inner envelope membrane of chloroplasts 55, translocon at the inner envelope membrane of chloroplasts 55, translocon at the inner envelope membrane of chloroplasts 55-II |
1 | 0.32 | -0.32 | ||
2 | AT3G63520 | carotenoid cleavage dioxygenase 1 | CAROTENOID CLEAVAGE DIOXYGENASE 1, ATNCED1, carotenoid cleavage dioxygenase 1, NCED1 |
0.82 | 0.32 | -0.33 | ||
3 | AT5G65940 | beta-hydroxyisobutyryl-CoA hydrolase 1 | beta-hydroxyisobutyryl-CoA hydrolase 1 |
0.8 | 0.33 | -0.33 | ||
4 | AT2G32700 | LEUNIG_homolog | LEUNIG_homolog, MUCILAGE-MODIFIED 1 |
0.79 | 0.31 | -0.29 | ||
5 | AT2G35840 | Sucrose-6F-phosphate phosphohydrolase family protein | 0.79 | 0.31 | -0.31 | |||
6 | AT2G35490 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.78 | 0.31 | -0.33 | |||
7 | AT4G37270 | heavy metal atpase 1 | ARABIDOPSIS THALIANA HEAVY METAL ATPASE 1, heavy metal atpase 1 |
0.77 | 0.32 | -0.3 | ||
8 | AT2G47390 | Prolyl oligopeptidase family protein | 0.77 | 0.31 | -0.32 | |||
9 | AT3G56460 | GroES-like zinc-binding alcohol dehydrogenase family protein |
0.77 | 0.31 | -0.32 | |||
10 | AT3G52880 | monodehydroascorbate reductase 1 | monodehydroascorbate reductase 1, monodehydroascorbate reductase 1 |
0.77 | 0.31 | -0.31 | ||
11 | AT1G07700 | Thioredoxin superfamily protein | 0.76 | 0.32 | -0.3 | |||
12 | AT5G59540 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.76 | 0.31 | -0.3 | |||
13 | AT5G50920 | CLPC homologue 1 | ATHSP93-V, CLPC, CLPC homologue 1, DE-REGULATED CAO ACCUMULATION 1, HEAT SHOCK PROTEIN 93-V |
0.76 | 0.34 | -0.29 | ||
14 | AT2G24860 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | 0.76 | 0.32 | -0.29 | |||
15 | AT4G25130 | peptide met sulfoxide reductase 4 | peptide met sulfoxide reductase 4 | 0.76 | 0.35 | -0.32 | ||
16 | AT5G43380 | type one serine/threonine protein phosphatase 6 | type one serine/threonine protein phosphatase 6 |
0.75 | 0.3 | -0.34 | ||
17 | AT1G09130 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.75 | 0.32 | -0.33 | |||
18 | AT1G28290 | arabinogalactan protein 31 | arabinogalactan protein 31 | -0.75 | 0.3 | -0.3 | ||
19 | AT4G13250 | NAD(P)-binding Rossmann-fold superfamily protein | NON-YELLOW COLORING 1 | 0.75 | 0.32 | -0.29 | ||
20 | AT3G01200 | PPDK regulatory protein 2 | PPDK regulatory protein 2, PPDK regulatory protein 2 |
0.75 | 0.3 | -0.33 | ||
21 | AT4G16690 | methyl esterase 16 | ARABIDOPSIS THALIANA METHYL ESTERASE 16, methyl esterase 16 |
0.74 | 0.3 | -0.31 | ||
22 | AT2G13820 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
AtXYP2, xylogen protein 2 | -0.74 | 0.3 | -0.32 | ||
23 | AT3G54360 | zinc ion binding | 0.74 | 0.33 | -0.31 | |||
24 | AT3G61220 | NAD(P)-binding Rossmann-fold superfamily protein | short-chain dehydrogenase/reductase 1 |
0.74 | 0.31 | -0.32 | ||
25 | AT5G57815 | Cytochrome c oxidase, subunit Vib family protein | 0.74 | 0.29 | -0.28 | |||
26 | AT4G15840 | BTB/POZ domain-containing protein | 0.74 | 0.31 | -0.32 | |||
27 | AT3G16170 | AMP-dependent synthetase and ligase family protein | acyl activating enzyme 13 | 0.73 | 0.31 | -0.33 | ||
28 | AT1G78120 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 12 | -0.73 | 0.33 | -0.32 | ||
29 | AT5G62810 | peroxin 14 | ATPEX14, PEROXISOME DEFECTIVE 2, peroxin 14 |
0.73 | 0.3 | -0.31 | ||
30 | AT5G58800 | Quinone reductase family protein | 0.72 | 0.31 | -0.31 | |||
31 | AT1G02475 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.72 | 0.29 | -0.3 | |||
32 | AT5G42740 | Sugar isomerase (SIS) family protein | 0.72 | 0.33 | -0.32 | |||
33 | AT1G65720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.32 | |||
34 | AT3G19900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420); Has 276 Blast hits to 276 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). |
0.72 | 0.31 | -0.33 | |||
35 | AT1G79230 | mercaptopyruvate sulfurtransferase 1 | ATMST1, ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 1, mercaptopyruvate sulfurtransferase 1, SULFURTRANSFERASE 1, STR1 |
0.71 | 0.33 | -0.33 | ||
36 | AT3G23400 | Plastid-lipid associated protein PAP / fibrillin family protein |
fibrillin 4 | 0.71 | 0.31 | -0.33 | ||
37 | AT4G16845 | VEFS-Box of polycomb protein | REDUCED VERNALIZATION RESPONSE 2 | 0.71 | 0.34 | -0.29 | ||
38 | AT5G39730 | AIG2-like (avirulence induced gene) family protein | 0.71 | 0.33 | -0.32 | |||
39 | AT3G27820 | monodehydroascorbate reductase 4 | MONODEHYDROASCORBATE REDUCTASE 4, monodehydroascorbate reductase 4 |
0.71 | 0.29 | -0.32 | ||
40 | AT2G01830 | CHASE domain containing histidine kinase protein | ARABIDOPSIS HISTIDINE KINASE 4, ATCRE1, CYTOKININ RESPONSE 1, WOODEN LEG, WOODEN LEG 1 |
-0.71 | 0.3 | -0.32 | ||
41 | AT4G14910 | HISTIDINE BIOSYNTHESIS 5B | HISTIDINE BIOSYNTHESIS 5B | 0.7 | 0.31 | -0.31 | ||
42 | AT3G19170 | presequence protease 1 | presequence protease 1, ATZNMP, presequence protease 1 |
0.7 | 0.34 | -0.31 | ||
43 | AT3G48100 | response regulator 5 | response regulator 5, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, INDUCED BY CYTOKININ 6, response regulator 5 |
-0.7 | 0.32 | -0.3 | ||
44 | AT4G36400 | FAD-linked oxidases family protein | D-2-hydroxyglutarate dehydrogenase | 0.7 | 0.32 | -0.31 | ||
45 | AT5G15860 | prenylcysteine methylesterase | prenylcysteine methylesterase, Isoprenylcysteine methylesterase, prenylcysteine methylesterase |
0.7 | 0.32 | -0.31 | ||
46 | AT3G58730 | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) |
0.69 | 0.31 | -0.33 | |||
47 | AT3G46980 | phosphate transporter 4;3 | phosphate transporter 4;3 | 0.69 | 0.3 | -0.32 | ||
48 | AT1G79760 | downstream target of AGL15-4 | downstream target of AGL15-4 | -0.69 | 0.29 | -0.31 | ||
49 | AT4G14880 | O-acetylserine (thiol) lyase (OAS-TL) isoform A1 | ATCYS-3A, CYTACS1, O-acetylserine (thiol) lyase (OAS-TL) isoform A1, ONSET OF LEAF DEATH 3 |
0.69 | 0.34 | -0.35 | ||
50 | AT1G43130 | like COV 2 | like COV 2 | 0.69 | 0.33 | -0.32 | ||
51 | AT3G54260 | TRICHOME BIREFRINGENCE-LIKE 36 | TRICHOME BIREFRINGENCE-LIKE 36 | -0.69 | 0.3 | -0.31 | ||
52 | AT5G60600 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | CHLOROPLAST BIOGENESIS 4, CONSTITUTIVE SUBTILISIN 3, GCPE, 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, ISPG |
0.69 | 0.31 | -0.34 | ||
53 | AT2G19970 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.69 | 0.34 | -0.33 | |||
54 | AT1G73990 | signal peptide peptidase | signal peptide peptidase, SPPA1 | 0.69 | 0.33 | -0.32 | ||
55 | AT4G14020 | Rapid alkalinization factor (RALF) family protein | 0.69 | 0.31 | -0.3 | |||
56 | AT1G28140 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.69 | 0.3 | -0.32 | |||
57 | AT2G46580 | Pyridoxamine 5'-phosphate oxidase family protein | 0.69 | 0.32 | -0.3 | |||
58 | AT1G54080 | oligouridylate-binding protein 1A | oligouridylate-binding protein 1A | 0.69 | 0.32 | -0.32 | ||
59 | AT3G04870 | zeta-carotene desaturase | PIGMENT DEFECTIVE EMBRYO 181, SPONTANEOUS CELL DEATH 1, zeta-carotene desaturase |
0.69 | 0.3 | -0.33 | ||
60 | AT4G21105 | cytochrome-c oxidases;electron carriers | 0.68 | 0.32 | -0.31 | |||
61 | AT3G25740 | methionine aminopeptidase 1C | methionine aminopeptidase 1C, METHIONINE AMINOPEPTIDASE 1C |
0.68 | 0.31 | -0.32 | ||
62 | AT5G54110 | membrane-associated mannitol-induced | membrane-associated mannitol-induced, membrane-associated mannitol-induced |
0.68 | 0.3 | -0.33 | ||
63 | AT1G12840 | vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) |
ARABIDOPSIS THALIANA VACUOLAR ATP SYNTHASE SUBUNIT C, DE-ETIOLATED 3 |
0.68 | 0.33 | -0.33 | ||
64 | AT2G17730 | NEP-interacting protein 2 | NEP-interacting protein 2 | 0.68 | 0.3 | -0.29 | ||
65 | AT3G60810 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). |
0.68 | 0.35 | -0.35 | |||
66 | AT5G13520 | peptidase M1 family protein | -0.68 | 0.31 | -0.3 | |||
67 | AT1G08590 | Leucine-rich receptor-like protein kinase family protein | -0.68 | 0.31 | -0.33 | |||
68 | AT3G18200 | nodulin MtN21 /EamA-like transporter family protein | -0.68 | 0.34 | -0.32 | |||
69 | AT1G11670 | MATE efflux family protein | -0.68 | 0.3 | -0.31 | |||
70 | AT5G64440 | fatty acid amide hydrolase | fatty acid amide hydrolase, fatty acid amide hydrolase |
0.67 | 0.31 | -0.31 | ||
71 | AT1G78140 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.67 | 0.3 | -0.31 | |||
72 | AT1G52590 | Putative thiol-disulphide oxidoreductase DCC | 0.67 | 0.31 | -0.34 | |||
73 | AT5G14780 | formate dehydrogenase | formate dehydrogenase | 0.67 | 0.32 | -0.33 | ||
74 | AT3G20060 | ubiquitin-conjugating enzyme19 | ubiquitin-conjugating enzyme19 | 0.67 | 0.34 | -0.32 | ||
75 | AT4G33490 | Eukaryotic aspartyl protease family protein | 0.67 | 0.31 | -0.32 | |||
76 | AT1G80600 | HOPW1-1-interacting 1 | HOPW1-1-interacting 1 | 0.67 | 0.29 | -0.31 | ||
77 | AT5G16210 | HEAT repeat-containing protein | 0.67 | 0.34 | -0.31 | |||
78 | AT4G13010 | Oxidoreductase, zinc-binding dehydrogenase family protein | 0.67 | 0.31 | -0.3 | |||
79 | AT5G53090 | NAD(P)-binding Rossmann-fold superfamily protein | -0.66 | 0.29 | -0.3 | |||
80 | AT1G22880 | cellulase 5 | ARABIDOPSIS THALIANA CELLULASE 5, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4, cellulase 5 |
-0.66 | 0.33 | -0.3 | ||
81 | AT1G60810 | ATP-citrate lyase A-2 | ATP-citrate lyase A-2 | -0.66 | 0.32 | -0.31 | ||
82 | AT4G35030 | Protein kinase superfamily protein | -0.66 | 0.3 | -0.32 | |||
83 | AT2G29980 | fatty acid desaturase 3 | AtFAD3, fatty acid desaturase 3 | -0.66 | 0.32 | -0.32 | ||
84 | AT5G22740 | cellulose synthase-like A02 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A02, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A2, cellulose synthase-like A02, CELLULOSE SYNTHASE-LIKE A 2 |
-0.66 | 0.32 | -0.31 | ||
85 | AT1G47670 | Transmembrane amino acid transporter family protein | -0.66 | 0.34 | -0.3 | |||
86 | AT1G30840 | purine permease 4 | purine permease 4, purine permease 4 |
-0.65 | 0.28 | -0.32 | ||
87 | AT5G66590 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.65 | 0.32 | -0.31 | |||
88 | AT1G70710 | glycosyl hydrolase 9B1 | glycosyl hydrolase 9B1, CELLULASE 1, glycosyl hydrolase 9B1 |
-0.65 | 0.35 | -0.31 | ||
89 | AT4G37590 | Phototropic-responsive NPH3 family protein | MAB4/ENP/NPY1-LIKE 1, NAKED PINS IN YUC MUTANTS 5 |
-0.65 | 0.3 | -0.31 | ||
90 | AT3G24210 | Ankyrin repeat family protein | -0.65 | 0.3 | -0.31 | |||
91 | AT4G18610 | Protein of unknown function (DUF640) | LIGHT SENSITIVE HYPOCOTYLS 9 | -0.65 | 0.32 | -0.31 | ||
92 | AT3G26750 | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.31 | -0.31 | |||
93 | AT2G26710 | Cytochrome P450 superfamily protein | PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 |
-0.64 | 0.29 | -0.31 | ||
94 | AT2G26480 | UDP-glucosyl transferase 76D1 | UDP-glucosyl transferase 76D1 | -0.63 | 0.31 | -0.32 | ||
95 | AT2G30210 | laccase 3 | laccase 3 | -0.63 | 0.33 | -0.31 | ||
96 | AT3G23090 | TPX2 (targeting protein for Xklp2) protein family | -0.63 | 0.32 | -0.32 | |||
97 | AT1G13970 | Protein of unknown function (DUF1336) | -0.62 | 0.33 | -0.31 | |||
98 | AT2G33790 | arabinogalactan protein 30 | arabinogalactan protein 30, ATAGP30 |
-0.62 | 0.3 | -0.32 | ||
99 | AT1G62280 | SLAC1 homologue 1 | SLAC1 homologue 1 | -0.62 | 0.3 | -0.31 | ||
100 | AT1G73620 | Pathogenesis-related thaumatin superfamily protein | -0.62 | 0.33 | -0.3 | |||
101 | AT4G33790 | Jojoba acyl CoA reductase-related male sterility protein | ECERIFERUM 4, FATTY ACID REDUCTASE 3, G7 |
-0.62 | 0.32 | -0.31 | ||
102 | AT2G43990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). |
-0.62 | 0.28 | -0.28 | |||
103 | AT3G20160 | Terpenoid synthases superfamily protein | -0.62 | 0.34 | -0.32 | |||
104 | AT5G07190 | seed gene 3 | seed gene 3 | -0.62 | 0.31 | -0.3 | ||
105 | AT5G62890 | Xanthine/uracil permease family protein | -0.61 | 0.3 | -0.32 | |||
106 | AT1G28400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
107 | AT3G48410 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.29 | -0.3 | |||
108 | AT4G28650 | Leucine-rich repeat transmembrane protein kinase family protein |
-0.61 | 0.34 | -0.32 | |||
109 | AT5G06930 | LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in 313 species: Archae - 2; Bacteria - 910; Metazoa - 754; Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes - 1219 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
110 | AT2G22900 | Galactosyl transferase GMA12/MNN10 family protein | -0.6 | 0.32 | -0.31 | |||
111 | AT5G58784 | Undecaprenyl pyrophosphate synthetase family protein | -0.6 | 0.32 | -0.33 | |||
112 | AT2G23410 | cis-prenyltransferase | cis-prenyltransferase, cis-prenyltransferase |
-0.6 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0083 | Digalactosyldiacylglycerol-36:4 | - | Digalactosyldiacylglycerol-36:4 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.79 | 0.46 | -0.52 | ||
114 | C0151 | Monogalactosyldiacylgycerol-34:4 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.76 | 0.46 | -0.46 | ||
115 | C0125 | isorhamnetin-3-O-glucoside | - | - | - | -0.69 | 0.43 | -0.46 | ||
116 | C0197 | Phosphatidylcholine-36:1 | - | Phosphatidylcholine-36:1 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
-0.68 | 0.56 | -0.51 | ||
117 | C0081 | Digalactosyldiacylglycerol-36:2 | - | Digalactosyldiacylglycerol-36:2 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.66 | 0.47 | -0.5 | ||
118 | C0155 | Monogalactosyldiacylgycerol-36:4 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.61 | 0.33 | -0.33 |