AT2G24790 : ATCOL3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G24790
Description CONSTANS-like 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G24790 CONSTANS-like 3 ATCOL3, CONSTANS-like 3 1 0.32 -0.31
2 AT2G35260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast
hits to 42 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.3 -0.32
3 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.32 -0.33
4 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.84 0.31 -0.29
5 AT5G44520 NagB/RpiA/CoA transferase-like superfamily protein 0.83 0.32 -0.3
6 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.83 0.33 -0.34
7 AT4G32060 calcium-binding EF hand family protein 0.83 0.35 -0.31
8 AT5G48590 Protein of unknown function (DUF760) 0.82 0.31 -0.32
9 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.81 0.3 -0.3
10 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.32 -0.37
11 AT5G03050 unknown protein; Has 33 Blast hits to 33 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.33 -0.33
12 AT5G67370 Protein of unknown function (DUF1230) 0.8 0.32 -0.3
13 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting		 0.79 0.32 -0.32
14 AT1G12430 armadillo repeat kinesin 3 armadillo repeat kinesin 3,
Arabidopsis thaliana KINESIN
Ungrouped clade, gene A,
phosphatidic acid kinase		 0.79 0.33 -0.31
15 AT1G69390 homologue of bacterial MinE 1 accumulation and replication of
chloroplasts 12, homologue of
bacterial MinE 1, homologue of
bacterial MinE 1		 0.78 0.3 -0.31
16 AT5G40760 glucose-6-phosphate dehydrogenase 6 glucose-6-phosphate dehydrogenase
6		 -0.78 0.32 -0.31
17 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.77 0.32 -0.32
18 AT1G75770 unknown protein; Has 6 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.77 0.28 -0.32
19 AT1G80850 DNA glycosylase superfamily protein 0.77 0.31 -0.33
20 AT5G19260 Protein of unknown function (DUF3049) FANTASTIC FOUR 3 0.76 0.31 -0.32
21 AT5G53940 Yippee family putative zinc-binding protein 0.76 0.32 -0.34
22 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.76 0.31 -0.31
23 AT4G16370 oligopeptide transporter oligopeptide transporter, OPT3,
oligopeptide transporter		 0.76 0.3 -0.3
24 AT1G60010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.75 0.32 -0.3
25 AT5G54630 zinc finger protein-related 0.75 0.3 -0.34
26 AT1G08980 amidase 1 amidase 1, AMIDASE-LIKE PROTEIN 1,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-I, TRANSLOCON AT THE OUTER
MEMBRANE OF CHLOROPLASTS 64-I		 0.75 0.3 -0.32
27 AT5G49230 Drought-responsive family protein HYPERSENSITIVE TO RED AND BLUE 0.75 0.32 -0.31
28 AT4G10000 Thioredoxin family protein 0.74 0.32 -0.31
29 AT2G20875 epidermal patterning factor 1 EPIDERMAL PATTERNING FACTOR 1 0.74 0.3 -0.3
30 AT4G09620 Mitochondrial transcription termination factor family
protein		 0.74 0.31 -0.29
31 AT3G16010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.74 0.32 -0.31
32 AT2G20180 phytochrome interacting factor 3-like 5 PHY-INTERACTING FACTOR 1,
phytochrome interacting factor
3-like 5		 0.74 0.31 -0.32
33 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.73 0.32 -0.32
34 AT3G61210 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.31 -0.32
35 AT1G07880 Protein kinase superfamily protein ATMPK13 0.73 0.31 -0.29
36 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 0.73 0.32 -0.29
37 AT5G67230 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 14 Homolog,
IRREGULAR XYLEM 14-LIKE		 0.73 0.32 -0.34
38 AT5G04150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH101 0.73 0.29 -0.29
39 AT5G03880 Thioredoxin family protein 0.73 0.33 -0.28
40 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.33 -0.31
41 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.73 0.35 -0.32
42 AT4G01460 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.73 0.32 -0.31
43 AT2G05710 aconitase 3 aconitase 3 -0.73 0.33 -0.3
44 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.72 0.33 -0.32
45 AT2G25520 Drug/metabolite transporter superfamily protein -0.71 0.31 -0.3
46 AT3G60860 SEC7-like guanine nucleotide exchange family protein -0.71 0.31 -0.32
47 AT5G09400 K+ uptake permease 7 K+ uptake permease 7 -0.7 0.32 -0.32
48 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.7 0.33 -0.31
49 AT2G39300 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast
hits to 28308 proteins in 1743 species: Archae - 734;
Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants -
2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI
BLink).		 -0.7 0.33 -0.28
50 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 -0.69 0.3 -0.34
51 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.69 0.33 -0.33
52 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.68 0.32 -0.32
53 AT4G32070 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox4 -0.68 0.33 -0.31
54 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.68 0.31 -0.33
55 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.67 0.31 -0.31
56 AT1G44100 amino acid permease 5 amino acid permease 5 -0.67 0.31 -0.34
57 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 -0.67 0.33 -0.32
58 AT4G11350 Protein of unknown function (DUF604) -0.66 0.31 -0.31
59 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 -0.66 0.31 -0.32
60 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 -0.66 0.29 -0.31
61 AT5G11100 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ATSYTD, NTMC2T2.2, NTMC2TYPE2.2,
synaptotagmin 4, SYTD		 -0.66 0.32 -0.32
62 AT1G74250 DNAJ heat shock N-terminal domain-containing protein -0.66 0.29 -0.32
63 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 -0.65 0.33 -0.31
64 AT2G16950 transportin 1 TRANSPORTIN 1, transportin 1 -0.65 0.33 -0.31
65 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.65 0.3 -0.31
66 AT3G08040 MATE efflux family protein ATFRD3, FERRIC REDUCTASE DEFECTIVE
3, MANGANESE ACCUMULATOR 1		 -0.64 0.31 -0.32
67 AT3G16440 myrosinase-binding protein-like protein-300B myrosinase-binding protein-like
protein-300B, maternal effect
embryo arrest 36,
myrosinase-binding protein-like
protein-300B		 -0.64 0.35 -0.3
68 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1		 -0.64 0.34 -0.32
69 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 -0.64 0.33 -0.34
70 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.64 0.3 -0.31
71 AT5G25820 Exostosin family protein -0.63 0.3 -0.31
72 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.29 -0.32
73 AT4G24130 Protein of unknown function, DUF538 -0.63 0.34 -0.32
74 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 -0.63 0.32 -0.33
75 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.63 0.33 -0.31
76 AT3G07660 Kinase-related protein of unknown function (DUF1296) -0.63 0.31 -0.29
77 AT5G41860 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.31 -0.29
78 AT2G28450 zinc finger (CCCH-type) family protein -0.62 0.31 -0.32
79 AT2G03770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.31 -0.32
80 AT4G08390 stromal ascorbate peroxidase stromal ascorbate peroxidase -0.62 0.32 -0.32
81 AT3G11340 UDP-Glycosyltransferase superfamily protein UDP-dependent glycosyltransferase
76B1		 -0.62 0.29 -0.3
82 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.62 0.29 -0.32
83 AT1G76090 sterol methyltransferase 3 sterol methyltransferase 3 -0.62 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
84 C0204 Phosphatidylglycerol-34:2 - Phosphatidylglycerol-34:2 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.88 0.45 -0.48 C0204
85 C0167 MST_1744.8 - - - 0.87 0.45 -0.46
86 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.83 0.5 -0.48 C0241
87 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.78 0.47 -0.49 C0003
88 C0074 Cystine L-Cystine L-Cystine protein precursor -0.77 0.45 -0.45 C0074
89 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.75 0.45 -0.44 C0010
90 C0176 MST_2406.9 - - - 0.74 0.45 -0.47