AGICode | AT2G21660 |
Description | cold, circadian rhythm, and rna binding 2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G21660 | cold, circadian rhythm, and rna binding 2 | GLYCINE RICH PROTEIN 7, cold, circadian rhythm, and rna binding 2, GLYCINE-RICH RNA-BINDING PROTEIN 7, GLYCINE-RICH RNA-BINDING PROTEIN 7 |
1 | 0.3 | -0.32 | ||
2 | AT1G19370 | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.78 | 0.32 | -0.32 | |||
3 | AT5G58600 | Plant protein of unknown function (DUF828) | POWDERY MILDEW RESISTANT 5, TRICHOME BIREFRINGENCE-LIKE 44 |
0.76 | 0.31 | -0.31 | ||
4 | AT4G39260 | cold, circadian rhythm, and RNA binding 1 | GLYCINE-RICH PROTEIN 8, cold, circadian rhythm, and RNA binding 1, glycine-rich RNA-binding protein 8, GRP8 |
0.74 | 0.31 | -0.3 | ||
5 | AT2G31360 | 16:0delta9 desaturase 2 | 16:0delta9 desaturase 2, 16:0delta9 desaturase 2 |
0.72 | 0.28 | -0.31 | ||
6 | AT5G48250 | B-box type zinc finger protein with CCT domain | 0.71 | 0.31 | -0.34 | |||
7 | AT1G28060 | Pre-mRNA-splicing factor 3 | 0.71 | 0.31 | -0.31 | |||
8 | AT2G28720 | Histone superfamily protein | 0.71 | 0.33 | -0.33 | |||
9 | AT3G09600 | Homeodomain-like superfamily protein | LHY-CCA1-LIKE5, REVEILLE 8 | -0.7 | 0.31 | -0.31 | ||
10 | AT5G11150 | vesicle-associated membrane protein 713 | vesicle-associated membrane protein 713, VAMP713, vesicle-associated membrane protein 713 |
0.7 | 0.32 | -0.32 | ||
11 | AT3G50670 | U1 small nuclear ribonucleoprotein-70K | U1 small nuclear ribonucleoprotein-70K, U1SNRNP |
0.69 | 0.32 | -0.29 | ||
12 | AT4G38580 | farnesylated protein 6 | farnesylated protein 6, farnesylated protein 6, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 |
0.68 | 0.3 | -0.34 | ||
13 | AT5G39680 | Pentatricopeptide repeat (PPR) superfamily protein | EMBRYO DEFECTIVE 2744 | 0.68 | 0.32 | -0.33 | ||
14 | AT3G23200 | Uncharacterised protein family (UPF0497) | -0.67 | 0.33 | -0.33 | |||
15 | AT2G40650 | PRP38 family protein | 0.66 | 0.29 | -0.3 | |||
16 | AT5G56140 | RNA-binding KH domain-containing protein | 0.65 | 0.3 | -0.3 | |||
17 | AT5G39400 | Calcium/lipid-binding (CaLB) phosphatase | ATPTEN1, Phosphatase and TENsin homolog deleted on chromosome ten 1 |
-0.65 | 0.31 | -0.32 | ||
18 | AT4G17150 | alpha/beta-Hydrolases superfamily protein | 0.64 | 0.31 | -0.34 | |||
19 | AT5G39410 | Saccharopine dehydrogenase | 0.64 | 0.31 | -0.29 | |||
20 | AT5G42420 | Nucleotide-sugar transporter family protein | 0.64 | 0.31 | -0.34 | |||
21 | AT1G16730 | unknown protein 6 | unknown protein 6 | -0.64 | 0.32 | -0.3 | ||
22 | AT2G27100 | C2H2 zinc-finger protein SERRATE (SE) | SERRATE | 0.64 | 0.31 | -0.31 | ||
23 | AT5G37780 | calmodulin 1 | ACAM-1, calmodulin 1, TOUCH 1 | 0.63 | 0.33 | -0.31 | ||
24 | AT5G23800 | DOMAIN OF UNKNOWN FUNCTION 724 10 | DOMAIN OF UNKNOWN FUNCTION 724 10, DOMAIN OF UNKNOWN FUNCTION 724 10 |
-0.62 | 0.32 | -0.32 | ||
25 | AT5G17460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.62 | 0.33 | -0.31 | |||
26 | AT2G02100 | low-molecular-weight cysteine-rich 69 | low-molecular-weight cysteine-rich 69, PDF2.2 |
0.61 | 0.31 | -0.32 | ||
27 | AT3G07650 | CONSTANS-like 9 | CONSTANS-like 9 | 0.61 | 0.31 | -0.31 | ||
28 | AT5G28020 | cysteine synthase D2 | CYSTEINE SYNTHASE D2, cysteine synthase D2 |
-0.61 | 0.31 | -0.35 | ||
29 | AT3G12510 | MADS-box family protein | 0.61 | 0.32 | -0.29 | |||
30 | AT2G22450 | riboflavin biosynthesis protein, putative | 0.61 | 0.31 | -0.29 | |||
31 | AT2G16640 | multimeric translocon complex in the outer envelope membrane 132 |
MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132, multimeric translocon complex in the outer envelope membrane 132 |
0.61 | 0.31 | -0.3 | ||
32 | AT1G72050 | transcription factor IIIA | transcription factor IIIA | 0.6 | 0.32 | -0.31 | ||
33 | AT5G46070 | Guanylate-binding family protein | 0.6 | 0.32 | -0.34 | |||
34 | AT4G31330 | Protein of unknown function, DUF599 | -0.59 | 0.31 | -0.31 | |||
35 | AT2G21130 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.59 | 0.31 | -0.29 | |||
36 | AT2G28360 | SIT4 phosphatase-associated family protein | 0.59 | 0.3 | -0.31 | |||
37 | AT4G01510 | Arv1-like protein | ARV2 | -0.59 | 0.31 | -0.3 | ||
38 | AT1G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.58 | 0.3 | -0.33 | |||
39 | AT3G26540 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.58 | 0.31 | -0.31 | |||
40 | AT5G61400 | Pentatricopeptide repeat (PPR) superfamily protein | 0.58 | 0.35 | -0.31 | |||
41 | AT1G59520 | CW7 | CW7 | -0.58 | 0.32 | -0.34 | ||
42 | AT4G38130 | histone deacetylase 1 | ARABIDOPSIS HISTONE DEACETYLASE 1, ARABIDOPSIS HISTONE DEACETYLASE 19, histone deacetylase 1, HDA1, HISTONE DEACETYLASE 19, RPD3A |
0.57 | 0.31 | -0.33 | ||
43 | AT5G22510 | alkaline/neutral invertase | alkaline/neutral invertase E, Arabidopsis alkaline/neutral invertase E, alkaline/neutral invertase E |
-0.57 | 0.31 | -0.3 | ||
44 | AT4G10770 | oligopeptide transporter 7 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 7, oligopeptide transporter 7 |
-0.56 | 0.31 | -0.31 | ||
45 | AT4G27850 | Glycine-rich protein family | -0.56 | 0.31 | -0.32 | |||
46 | AT5G26980 | syntaxin of plants 41 | ATSYP41, ATTLG2A, syntaxin of plants 41 |
-0.54 | 0.31 | -0.29 | ||
47 | AT1G07190 | BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.53 | 0.35 | -0.31 | |||
48 | AT1G65540 | LETM1-like protein | -0.5 | 0.31 | -0.31 | |||
49 | AT1G61500 | S-locus lectin protein kinase family protein | -0.47 | 0.3 | -0.33 | |||
50 | AT1G72270 | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
-0.47 | 0.33 | -0.3 | |||
51 | AT5G62160 | zinc transporter 12 precursor | zinc transporter 12 precursor, zinc transporter 12 precursor |
-0.47 | 0.29 | -0.32 | ||
52 | AT1G60240 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
-0.46 | 0.33 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
53 | C0131 | Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside | Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside | Kaempferol-3-glucoside-7-rhamnoside | kaempferol glucoside biosynthesis (Arabidopsis) | -0.7 | 0.45 | -0.47 |