AT2G15380 : -
Query Information
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AGICode AT2G15380
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G15380 transposable element gene 1 0.3 -0.33
2 ATCG01020 ribosomal protein L32 ribosomal protein L32 0.7 0.3 -0.32
3 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.63 0.32 -0.32
4 ATCG00040 maturase K maturase K 0.63 0.31 -0.3
5 AT1G26820 ribonuclease 3 ribonuclease 3 -0.61 0.3 -0.31
6 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 -0.61 0.3 -0.32
7 AT3G44970 Cytochrome P450 superfamily protein 0.6 0.33 -0.3
8 AT1G53440 Leucine-rich repeat transmembrane protein kinase 0.59 0.28 -0.31
9 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.58 0.31 -0.3
10 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.58 0.32 -0.31
11 AT5G57940 cyclic nucleotide gated channel 5 cyclic nucleotide gated channel 5,
cyclic nucleotide gated channel 5		 0.58 0.33 -0.31
12 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.57 0.32 -0.31
13 AT2G16780 Transducin family protein / WD-40 repeat family protein MSI02, MULTICOPY SUPPRESSOR OF
IRA1 2, NFC02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 2		 -0.57 0.3 -0.31
14 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.57 0.29 -0.33
15 AT2G35540 DNAJ heat shock N-terminal domain-containing protein 0.57 0.32 -0.27
16 AT3G20740 Transducin/WD40 repeat-like superfamily protein FERTILIZATION-INDEPENDENT
ENDOSPERM,
FERTILIZATION-INDEPENDENT
ENDOSPERM 1, FIS3		 0.55 0.3 -0.32
17 AT3G21410 F-box and associated interaction domains-containing protein 0.55 0.32 -0.32
18 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.31
19 AT1G67980 caffeoyl-CoA 3-O-methyltransferase caffeoyl-CoA 3-O-methyltransferase 0.54 0.3 -0.33
20 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.54 0.32 -0.31
21 AT4G32890 GATA transcription factor 9 GATA transcription factor 9 -0.54 0.32 -0.34
22 AT5G62180 carboxyesterase 20 carboxyesterase 20,
carboxyesterase 20		 -0.54 0.31 -0.29
23 AT4G27040 EAP30/Vps36 family protein VPS22 0.53 0.33 -0.32
24 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 -0.53 0.3 -0.36
25 AT4G31030 Putative membrane lipoprotein 0.53 0.33 -0.29
26 AT5G23220 nicotinamidase 3 nicotinamidase 3 -0.53 0.31 -0.3
27 AT5G47635 Pollen Ole e 1 allergen and extensin family protein -0.53 0.34 -0.33
28 AT5G40630 Ubiquitin-like superfamily protein -0.52 0.32 -0.32
29 AT1G25410 isopentenyltransferase 6 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 6,
isopentenyltransferase 6		 0.51 0.32 -0.34
30 AT3G06870 proline-rich family protein 0.5 0.32 -0.32
31 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.5 0.3 -0.31
32 AT3G58860 F-box/RNI-like superfamily protein 0.49 0.3 -0.31
33 AT2G29150 NAD(P)-binding Rossmann-fold superfamily protein 0.49 0.28 -0.32
34 AT4G07425 transposable element gene 0.49 0.32 -0.33
35 AT5G57970 DNA glycosylase superfamily protein -0.46 0.33 -0.3
36 AT5G41440 RING/U-box superfamily protein -0.44 0.33 -0.32
37 AT4G01910 Cysteine/Histidine-rich C1 domain family protein -0.44 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
38 C0006 β-Homothreonine L-β-Homothreonine - - -0.63 0.45 -0.41
39 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.6 0.43 -0.46 C0027