AGICode | AT2G17030 |
Description | F-box family protein with a domain of unknown function (DUF295) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G17030 | F-box family protein with a domain of unknown function (DUF295) |
1 | 0.33 | -0.34 | |||
2 | AT3G54380 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3C, yeast Sac3 homolog C | 0.74 | 0.31 | -0.3 | ||
3 | AT5G62330 | BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.3 | -0.31 | |||
4 | AT3G07340 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.7 | 0.35 | -0.33 | |||
5 | AT5G03770 | KDO transferase A | AtKdtA, KDO transferase A | 0.63 | 0.32 | -0.33 | ||
6 | AT5G04420 | Galactose oxidase/kelch repeat superfamily protein | -0.62 | 0.31 | -0.31 | |||
7 | AT1G25490 | ARM repeat superfamily protein | ATB BETA BETA, ENHANCED ETHYLENE RESPONSE 1, ROOTS CURL IN NPA, REGA |
-0.62 | 0.31 | -0.33 | ||
8 | AT3G63000 | NPL4-like protein 1 | NPL4-like protein 1 | 0.61 | 0.31 | -0.31 | ||
9 | AT1G76240 | Arabidopsis protein of unknown function (DUF241) | -0.6 | 0.32 | -0.32 | |||
10 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.31 | -0.31 | |||
11 | AT3G50080 | VIER F-box proteine 2 | VIER F-box proteine 2 | 0.59 | 0.31 | -0.32 | ||
12 | AT4G13980 | winged-helix DNA-binding transcription factor family protein |
AT-HSFA5, HEAT SHOCK TRANSCRIPTION FACTOR A5 |
0.59 | 0.32 | -0.32 | ||
13 | AT3G21000 | Gag-Pol-related retrotransposon family protein | -0.59 | 0.31 | -0.31 | |||
14 | AT1G68490 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.31 | |||
15 | AT5G55240 | ARABIDOPSIS THALIANA PEROXYGENASE 2 | ARABIDOPSIS THALIANA PEROXYGENASE 2 |
0.59 | 0.32 | -0.31 | ||
16 | AT1G70990 | proline-rich family protein | -0.59 | 0.34 | -0.32 | |||
17 | AT5G35660 | Glycine-rich protein family | 0.58 | 0.31 | -0.28 | |||
18 | AT1G55390 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.32 | -0.32 | |||
19 | AT1G65480 | PEBP (phosphatidylethanolamine-binding protein) family protein |
FLOWERING LOCUS T | -0.58 | 0.31 | -0.3 | ||
20 | AT5G45690 | Protein of unknown function (DUF1264) | 0.57 | 0.33 | -0.35 | |||
21 | AT5G47810 | phosphofructokinase 2 | phosphofructokinase 2 | 0.57 | 0.31 | -0.32 | ||
22 | AT5G18450 | Integrase-type DNA-binding superfamily protein | 0.57 | 0.33 | -0.33 | |||
23 | AT1G01280 | cytochrome P450, family 703, subfamily A, polypeptide 2 | CYP703, cytochrome P450, family 703, subfamily A, polypeptide 2 |
0.57 | 0.29 | -0.3 | ||
24 | AT5G37450 | Leucine-rich repeat protein kinase family protein | -0.57 | 0.33 | -0.31 | |||
25 | AT4G04165 | transposable element gene | 0.57 | 0.29 | -0.3 | |||
26 | AT3G51810 | Stress induced protein | AT3, ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1, LATE EMBRYOGENESIS ABUNDANT 1, GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 |
0.57 | 0.33 | -0.31 | ||
27 | AT3G06710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 15 Blast hits to 15 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.33 | |||
28 | AT5G43310 | COP1-interacting protein-related | 0.57 | 0.34 | -0.32 | |||
29 | AT1G25530 | Transmembrane amino acid transporter family protein | 0.56 | 0.3 | -0.32 | |||
30 | AT5G03510 | C2H2-type zinc finger family protein | -0.56 | 0.31 | -0.32 | |||
31 | AT2G20700 | LORELEI-LIKE-GPI ANCHORED PROTEIN 2 | LORELEI-LIKE-GPI ANCHORED PROTEIN 2 |
-0.56 | 0.31 | -0.29 | ||
32 | AT5G51470 | Auxin-responsive GH3 family protein | -0.56 | 0.3 | -0.33 | |||
33 | AT1G21950 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21940.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.32 | |||
34 | AT1G08960 | cation exchanger 11 | CATION EXCHANGER 11, Arabidopsis thaliana cation calcium exchanger 5, cation exchanger 11, cation calcium exchanger 5 |
-0.56 | 0.3 | -0.32 | ||
35 | AT2G33260 | Tryptophan/tyrosine permease | -0.55 | 0.33 | -0.3 | |||
36 | AT1G24260 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 9, SEPALLATA3 | -0.55 | 0.31 | -0.32 | ||
37 | AT2G38600 | HAD superfamily, subfamily IIIB acid phosphatase | -0.55 | 0.31 | -0.3 | |||
38 | AT4G19500 | nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding |
0.55 | 0.33 | -0.33 | |||
39 | AT5G47770 | farnesyl diphosphate synthase 1 | farnesyl diphosphate synthase 1 | -0.55 | 0.31 | -0.29 | ||
40 | AT3G45120 | transposable element gene | 0.55 | 0.31 | -0.31 | |||
41 | AT2G02610 | Cysteine/Histidine-rich C1 domain family protein | -0.55 | 0.32 | -0.33 | |||
42 | AT3G42140 | zinc ion binding;nucleic acid binding | -0.54 | 0.36 | -0.32 | |||
43 | AT5G66100 | winged-helix DNA-binding transcription factor family protein |
-0.54 | 0.3 | -0.34 | |||
44 | AT2G27180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.3 | |||
45 | AT5G52975 | Protein of unknown function (DUF1278) | 0.54 | 0.3 | -0.31 | |||
46 | AT5G40250 | RING/U-box superfamily protein | -0.53 | 0.28 | -0.32 | |||
47 | AT4G03140 | NAD(P)-binding Rossmann-fold superfamily protein | 0.53 | 0.33 | -0.32 | |||
48 | AT1G04310 | ethylene response sensor 2 | ethylene response sensor 2 | 0.53 | 0.3 | -0.31 | ||
49 | AT4G28830 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.53 | 0.34 | -0.32 | |||
50 | AT4G27840 | SNARE-like superfamily protein | 0.53 | 0.3 | -0.3 | |||
51 | AT2G18650 | RING/U-box superfamily protein | maternal effect embryo arrest 16 | -0.52 | 0.29 | -0.31 | ||
52 | AT5G22990 | C2H2-like zinc finger protein | -0.52 | 0.31 | -0.32 | |||
53 | AT3G45710 | Major facilitator superfamily protein | -0.52 | 0.33 | -0.32 | |||
54 | AT2G13270 | transposable element gene | 0.52 | 0.31 | -0.33 | |||
55 | AT5G06070 | C2H2 and C2HC zinc fingers superfamily protein | RAB, RABBIT EARS | 0.52 | 0.32 | -0.32 | ||
56 | AT1G48800 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.52 | 0.31 | -0.32 | |||
57 | AT3G45940 | Glycosyl hydrolases family 31 protein | -0.51 | 0.32 | -0.32 | |||
58 | AT3G42880 | Leucine-rich repeat protein kinase family protein | 0.51 | 0.32 | -0.33 | |||
59 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
-0.5 | 0.31 | -0.32 | ||
60 | AT3G50610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
-0.5 | 0.3 | -0.32 | |||
61 | AT1G80020 | transposable element gene | -0.5 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
62 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.72 | 0.43 | -0.43 |