AT2G16260 : glycine-rich RNA-binding protein 1
Query Information
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AGICode AT2G16260
Description pseudogene of glycine-rich RNA-binding protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 1 0.33 -0.3
2 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 -0.72 0.32 -0.32
3 AT3G46070 C2H2-type zinc finger family protein 0.71 0.33 -0.31
4 AT4G05060 PapD-like superfamily protein -0.71 0.32 -0.32
5 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 0.7 0.31 -0.31
6 AT2G23360 Plant protein of unknown function (DUF869) 0.7 0.34 -0.33
7 AT2G16210 Transcriptional factor B3 family protein 0.7 0.31 -0.3
8 AT5G30380 transposable element gene 0.69 0.3 -0.31
9 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS 0.69 0.32 -0.32
10 AT4G16350 calcineurin B-like protein 6 calcineurin B-like protein 6,
SOS3-LIKE CALCIUM BINDING PROTEIN
2		 0.69 0.31 -0.3
11 AT1G72870 Disease resistance protein (TIR-NBS class) 0.69 0.3 -0.33
12 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.29 -0.31
13 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 0.69 0.33 -0.3
14 AT1G30010 Intron maturase, type II family protein 0.68 0.32 -0.33
15 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 0.68 0.32 -0.31
16 AT2G36210 SAUR-like auxin-responsive protein family 0.67 0.32 -0.32
17 AT1G79030 Chaperone DnaJ-domain superfamily protein 0.67 0.32 -0.32
18 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 -0.67 0.33 -0.32
19 AT5G49470 PAS domain-containing protein tyrosine kinase family
protein		 0.67 0.35 -0.32
20 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.67 0.31 -0.33
21 AT1G05400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06810.1); Has 31 Blast hits
to 31 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.33 -0.33
22 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.3 -0.31
23 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein 0.66 0.32 -0.32
24 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.66 0.32 -0.31
25 AT1G66550 WRKY DNA-binding protein 67 ATWRKY67, WRKY DNA-binding protein
67		 0.66 0.31 -0.33
26 AT5G03250 Phototropic-responsive NPH3 family protein 0.65 0.31 -0.32
27 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.65 0.29 -0.32
28 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.65 0.32 -0.3
29 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 0.65 0.31 -0.3
30 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.65 0.35 -0.29
31 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.32 -0.3
32 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.31
33 AT2G41570 transposable element gene -0.65 0.3 -0.29
34 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.64 0.33 -0.3
35 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 0.64 0.32 -0.32
36 AT3G14950 tetratricopetide-repeat thioredoxin-like 2 tetratricopetide-repeat
thioredoxin-like 2		 -0.64 0.33 -0.29
37 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.64 0.3 -0.31
38 AT2G02830 transposable element gene 0.64 0.31 -0.31
39 AT4G36750 Quinone reductase family protein -0.63 0.31 -0.3
40 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.63 0.31 -0.31
41 AT4G39110 Malectin/receptor-like protein kinase family protein 0.63 0.29 -0.33
42 AT1G76430 phosphate transporter 1;9 phosphate transporter 1;9 0.63 0.31 -0.31
43 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.63 0.3 -0.33
44 AT1G66960 Terpenoid cyclases family protein LUP5 0.63 0.31 -0.32
45 AT5G61865 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.3 -0.31
46 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 0.63 0.32 -0.31
47 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.62 0.31 -0.33
48 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.3 -0.31
49 AT1G47940 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.33 -0.31
50 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.32 -0.3
51 AT1G62440 leucine-rich repeat/extensin 2 leucine-rich repeat/extensin 2 0.62 0.32 -0.33
52 AT1G05760 Mannose-binding lectin superfamily protein restricted tev movement 1 -0.62 0.3 -0.32
53 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 0.62 0.31 -0.31
54 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 0.61 0.33 -0.33
55 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.61 0.31 -0.32
56 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.61 0.31 -0.29
57 AT3G03860 APR-like 5 APR-like 5, APR-like 5 -0.6 0.33 -0.32
58 AT4G34330 Protein of unknown function (DUF677) 0.6 0.33 -0.31
59 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.6 0.31 -0.33
60 AT5G40230 nodulin MtN21 /EamA-like transporter family protein 0.6 0.32 -0.33
61 AT4G32560 paramyosin-related -0.6 0.31 -0.32
62 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.6 0.29 -0.31
63 AT3G59730 Concanavalin A-like lectin protein kinase family protein -0.6 0.32 -0.32
64 AT3G24750 unknown protein; Has 25 Blast hits to 25 proteins in 12
species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.31
65 AT1G31290 ARGONAUTE 3 ARGONAUTE 3 0.6 0.33 -0.3
66 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.6 0.3 -0.3
67 AT1G73290 serine carboxypeptidase-like 5 serine carboxypeptidase-like 5 -0.6 0.32 -0.32
68 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 0.6 0.31 -0.3
69 AT1G52470 alpha/beta-Hydrolases superfamily protein -0.59 0.29 -0.31
70 AT1G66100 Plant thionin -0.59 0.32 -0.31
71 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.59 0.32 -0.31
72 AT1G27380 ROP-interactive CRIB motif-containing protein 2 ROP-interactive CRIB
motif-containing protein 2		 -0.58 0.29 -0.31
73 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein		 vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2		 -0.58 0.34 -0.31
74 AT5G19810 Proline-rich extensin-like family protein -0.57 0.31 -0.29
75 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.57 0.32 -0.33
76 AT5G56720 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 3		 -0.57 0.33 -0.32
77 AT5G62940 Dof-type zinc finger DNA-binding family protein DNA BINDING WITH ONE FINGER 5.6,
HIGH CAMBIAL ACTIVITY2		 -0.55 0.3 -0.29
78 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.32 -0.32
79 AT5G52130 unknown protein; Has 10 Blast hits to 10 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.32
80 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 -0.54 0.34 -0.34
81 AT5G03370 acylphosphatase family -0.54 0.32 -0.3
82 AT1G77350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function KRTCAP2
(InterPro:IPR018614); Has 141 Blast hits to 141 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi -
0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 -0.54 0.31 -0.32
83 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 -0.54 0.31 -0.31
84 AT3G43060 transposable element gene -0.54 0.32 -0.33
85 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.54 0.31 -0.3
86 AT3G05720 importin alpha isoform 7 importin alpha isoform 7 -0.54 0.32 -0.32
87 AT1G80970 XH domain-containing protein -0.54 0.32 -0.34