AGICode | AT2G04630 |
Description | RNA polymerase Rpb6 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G04630 | RNA polymerase Rpb6 | NRPB6B, NRPE6B | 1 | 0.32 | -0.3 | ||
2 | AT1G15340 | methyl-CPG-binding domain 10 | methyl-CPG-binding domain 10 | -0.71 | 0.3 | -0.32 | ||
3 | AT3G48570 | secE/sec61-gamma protein transport protein | 0.68 | 0.3 | -0.3 | |||
4 | AT1G15390 | peptide deformylase 1A | ATDEF1, peptide deformylase 1A | 0.66 | 0.31 | -0.35 | ||
5 | AT3G25670 | Leucine-rich repeat (LRR) family protein | -0.65 | 0.3 | -0.31 | |||
6 | AT3G43740 | Leucine-rich repeat (LRR) family protein | 0.65 | 0.34 | -0.36 | |||
7 | AT5G65500 | U-box domain-containing protein kinase family protein | -0.63 | 0.31 | -0.3 | |||
8 | AT5G14540 | Protein of unknown function (DUF1421) | -0.62 | 0.32 | -0.3 | |||
9 | AT3G05070 | CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). |
0.62 | 0.31 | -0.26 | |||
10 | AT3G58180 | ARM repeat superfamily protein | 0.62 | 0.31 | -0.33 | |||
11 | AT3G10340 | phenylalanine ammonia-lyase 4 | phenylalanine ammonia-lyase 4 | -0.61 | 0.33 | -0.33 | ||
12 | AT2G38080 | Laccase/Diphenol oxidase family protein | ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRREGULAR XYLEM 12, LACCASE 4, LACCASE-LIKE MULTICOPPER OXIDASE 4 |
-0.6 | 0.33 | -0.33 | ||
13 | AT3G05760 | C2H2 and C2HC zinc fingers superfamily protein | 0.6 | 0.32 | -0.33 | |||
14 | AT3G02210 | COBRA-like protein 1 precursor | COBRA-like protein 1 precursor | -0.6 | 0.33 | -0.32 | ||
15 | AT2G25780 | Protein of unknown function (DUF1677) | 0.59 | 0.3 | -0.31 | |||
16 | AT1G15940 | Tudor/PWWP/MBT superfamily protein | -0.59 | 0.32 | -0.31 | |||
17 | AT5G52220 | CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.59 | 0.3 | -0.35 | |||
18 | AT1G71930 | vascular related NAC-domain protein 7 | Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 |
-0.58 | 0.3 | -0.3 | ||
19 | AT1G76860 | Small nuclear ribonucleoprotein family protein | 0.58 | 0.33 | -0.31 | |||
20 | AT3G49880 | glycosyl hydrolase family protein 43 | -0.58 | 0.31 | -0.31 | |||
21 | AT4G12700 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
-0.57 | 0.29 | -0.32 | |||
22 | AT5G09380 | RNA polymerase III RPC4 | 0.57 | 0.34 | -0.3 | |||
23 | AT2G35720 | DNAJ heat shock N-terminal domain-containing protein | ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 |
0.57 | 0.33 | -0.32 | ||
24 | AT5G08420 | RNA-binding KH domain-containing protein | 0.57 | 0.3 | -0.32 | |||
25 | AT5G66300 | NAC domain containing protein 105 | Arabidopsis NAC domain containing protein 105, NAC domain containing protein 105, VASCULAR-RELATED NAC-DOMAIN 3 |
-0.57 | 0.32 | -0.33 | ||
26 | AT4G18425 | Protein of unknown function (DUF679) | -0.57 | 0.34 | -0.33 | |||
27 | AT3G50690 | Leucine-rich repeat (LRR) family protein | -0.56 | 0.33 | -0.31 | |||
28 | AT3G20110 | cytochrome P450, family 705, subfamily A, polypeptide 20 | cytochrome P450, family 705, subfamily A, polypeptide 20 |
0.56 | 0.31 | -0.3 | ||
29 | AT1G03390 | HXXXD-type acyl-transferase family protein | -0.56 | 0.33 | -0.31 | |||
30 | AT5G59845 | Gibberellin-regulated family protein | -0.56 | 0.33 | -0.32 | |||
31 | AT5G60020 | laccase 17 | ATLAC17, laccase 17 | -0.55 | 0.33 | -0.32 | ||
32 | AT1G35320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to 9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.32 | -0.32 | |||
33 | AT3G61630 | cytokinin response factor 6 | cytokinin response factor 6 | 0.55 | 0.3 | -0.34 | ||
34 | AT2G18410 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetylation protein 2 (InterPro:IPR019519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.55 | 0.3 | -0.31 | |||
35 | AT5G18920 | Cox19-like CHCH family protein | 0.55 | 0.31 | -0.33 | |||
36 | AT5G04290 | kow domain-containing transcription factor 1 | kow domain-containing transcription factor 1, SPT5-LIKE |
-0.54 | 0.3 | -0.31 | ||
37 | AT1G62510 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.54 | 0.32 | -0.31 | |||
38 | AT1G43850 | SEUSS transcriptional co-regulator | seuss | -0.54 | 0.34 | -0.31 | ||
39 | AT5G55190 | RAN GTPase 3 | RAN GTPASE 3, RAN GTPase 3 | 0.54 | 0.31 | -0.34 | ||
40 | AT3G24660 | transmembrane kinase-like 1 | transmembrane kinase-like 1 | -0.53 | 0.32 | -0.32 | ||
41 | AT4G15620 | Uncharacterised protein family (UPF0497) | -0.53 | 0.3 | -0.32 | |||
42 | AT5G67360 | Subtilase family protein | ARA12 | -0.52 | 0.3 | -0.3 | ||
43 | AT5G44120 | RmlC-like cupins superfamily protein | CRUCIFERINA, CRUCIFERINA, CRU1 | -0.52 | 0.29 | -0.32 | ||
44 | AT3G17740 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). |
-0.5 | 0.3 | -0.31 |