AT1G60080 : -
Query Information
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AGICode AT1G60080
Description 3'-5'-exoribonuclease family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G60080 3'-5'-exoribonuclease family protein 1 0.3 -0.32
2 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.89 0.33 -0.31
3 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.86 0.31 -0.33
4 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 0.85 0.32 -0.32
5 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.85 0.32 -0.31
6 AT4G36210 Protein of unknown function (DUF726) -0.84 0.31 -0.31
7 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.84 0.34 -0.32
8 AT4G32720 La protein 1 La protein 1, La protein 1 0.84 0.32 -0.33
9 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.83 0.32 -0.3
10 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.83 0.33 -0.33
11 AT1G73040 Mannose-binding lectin superfamily protein -0.83 0.3 -0.32
12 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.83 0.33 -0.31
13 AT4G10450 Ribosomal protein L6 family 0.83 0.3 -0.31
14 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.83 0.33 -0.33
15 AT4G26230 Ribosomal protein L31e family protein 0.83 0.31 -0.33
16 AT5G62440 Protein of unknown function (DUF3223) 0.83 0.33 -0.32
17 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.82 0.31 -0.32
18 AT2G18220 Noc2p family 0.82 0.32 -0.31
19 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 0.82 0.31 -0.31
20 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.82 0.33 -0.3
21 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.81 0.33 -0.29
22 AT3G10250 Plant protein 1589 of unknown function -0.81 0.34 -0.3
23 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.31 -0.32
24 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.81 0.32 -0.32
25 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.81 0.31 -0.31
26 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.81 0.31 -0.3
27 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.81 0.3 -0.32
28 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.81 0.32 -0.32
29 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 0.81 0.28 -0.3
30 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.81 0.32 -0.31
31 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.8 0.33 -0.31
32 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.8 0.32 -0.32
33 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.8 0.3 -0.32
34 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.8 0.33 -0.3
35 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.8 0.33 -0.3
36 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.8 0.31 -0.31
37 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.8 0.35 -0.3
38 AT1G20220 Alba DNA/RNA-binding protein 0.8 0.33 -0.3
39 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.8 0.29 -0.31
40 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.8 0.31 -0.31
41 AT3G09890 Ankyrin repeat family protein 0.79 0.33 -0.31
42 AT1G19450 Major facilitator superfamily protein 0.79 0.31 -0.34
43 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.79 0.32 -0.3
44 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.79 0.33 -0.31
45 AT4G25090 Riboflavin synthase-like superfamily protein 0.79 0.29 -0.31
46 AT1G02305 Cysteine proteinases superfamily protein -0.79 0.29 -0.32
47 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.32 -0.34
48 AT3G55510 Noc2p family REBELOTE 0.79 0.32 -0.33
49 AT5G14520 pescadillo-related 0.79 0.34 -0.3
50 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.3 -0.33
51 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.78 0.3 -0.31
52 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 -0.78 0.29 -0.31
53 AT1G76120 Pseudouridine synthase family protein 0.78 0.32 -0.3
54 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.78 0.31 -0.31
55 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.78 0.31 -0.3
56 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.78 0.3 -0.32
57 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.78 0.3 -0.31
58 AT5G42050 DCD (Development and Cell Death) domain protein -0.78 0.32 -0.3
59 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.78 0.31 -0.31
60 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.78 0.32 -0.3
61 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.78 0.31 -0.31
62 AT1G13030 sphere organelles protein-related 0.78 0.33 -0.31
63 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.78 0.32 -0.32
64 AT3G01260 Galactose mutarotase-like superfamily protein 0.78 0.31 -0.33
65 AT1G12270 stress-inducible protein, putative Hop1 0.78 0.3 -0.33
66 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.78 0.34 -0.32
67 AT1G60850 DNA-directed RNA polymerase family protein AAC42, ATRPAC42 0.77 0.3 -0.31
68 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.77 0.31 -0.31
69 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.77 0.34 -0.32
70 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.77 0.32 -0.31
71 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.77 0.32 -0.31
72 AT3G06780 glycine-rich protein -0.77 0.3 -0.32
73 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.77 0.32 -0.29
74 AT3G02530 TCP-1/cpn60 chaperonin family protein 0.77 0.32 -0.31
75 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.77 0.32 -0.34
76 AT2G31800 Integrin-linked protein kinase family -0.77 0.32 -0.29
77 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.77 0.32 -0.3
78 AT5G58740 HSP20-like chaperones superfamily protein -0.77 0.3 -0.32
79 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.77 0.33 -0.33
80 AT1G09660 RNA-binding KH domain-containing protein 0.76 0.32 -0.32
81 AT1G15810 S15/NS1, RNA-binding protein 0.76 0.31 -0.3
82 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.76 0.3 -0.3
83 AT1G64880 Ribosomal protein S5 family protein 0.76 0.33 -0.31
84 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.76 0.31 -0.31
85 AT1G12050 fumarylacetoacetase, putative -0.76 0.31 -0.3
86 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.76 0.33 -0.31
87 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.76 0.28 -0.29
88 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.76 0.31 -0.32
89 AT5G49560 Putative methyltransferase family protein 0.76 0.34 -0.31
90 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.76 0.3 -0.31
91 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 0.76 0.3 -0.3
92 AT5G25810 Integrase-type DNA-binding superfamily protein TINY 0.76 0.31 -0.32
93 AT5G65860 ankyrin repeat family protein 0.76 0.31 -0.32
94 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.76 0.32 -0.31
95 AT3G09720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.29 -0.32
96 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.32 -0.3
97 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.75 0.3 -0.31
98 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.75 0.33 -0.29
99 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.75 0.31 -0.3
100 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.75 0.33 -0.34
101 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.74 0.3 -0.3
102 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.74 0.31 -0.32
103 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 -0.74 0.32 -0.32
104 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.74 0.31 -0.32
105 AT5G66400 Dehydrin family protein ARABIDOPSIS THALIANA
DROUGHT-INDUCED 8, RESPONSIVE TO
ABA 18		 -0.74 0.32 -0.32
106 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.74 0.32 -0.33
107 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.74 0.32 -0.3
108 AT4G11960 PGR5-like B PGR5-like B -0.74 0.32 -0.35
109 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.74 0.32 -0.32
110 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.73 0.32 -0.33
111 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.73 0.31 -0.31
112 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.73 0.32 -0.32
113 AT3G19620 Glycosyl hydrolase family protein -0.73 0.31 -0.33
114 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.73 0.32 -0.31
115 AT5G65840 Thioredoxin superfamily protein -0.73 0.29 -0.34
116 AT5G37670 HSP20-like chaperones superfamily protein -0.73 0.31 -0.33
117 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.73 0.31 -0.32
118 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.72 0.32 -0.33
119 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 -0.72 0.31 -0.31
120 AT4G37000 accelerated cell death 2 (ACD2) ACCELERATED CELL DEATH 2,
ARABIDOPSIS THALIANA RED
CHLOROPHYLL CATABOLITE REDUCTASE		 -0.72 0.28 -0.33
121 AT2G24040 Low temperature and salt responsive protein family -0.72 0.32 -0.33
122 AT5G38895 RING/U-box superfamily protein -0.72 0.34 -0.31
123 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.72 0.32 -0.31
124 AT2G42950 Magnesium transporter CorA-like family protein -0.72 0.31 -0.29
125 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.72 0.31 -0.31
126 AT4G29420 F-box/RNI-like superfamily protein -0.72 0.33 -0.32
127 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.72 0.3 -0.31
128 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.72 0.3 -0.3
129 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.72 0.28 -0.32
130 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.71 0.32 -0.29
131 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.71 0.32 -0.32
132 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.3 -0.32
133 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.71 0.3 -0.33
134 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.71 0.31 -0.32
135 AT3G45770 Polyketide synthase, enoylreductase family protein -0.71 0.31 -0.32
136 AT2G32800 protein kinase family protein AP4.3A -0.71 0.31 -0.31
137 AT4G10730 Protein kinase superfamily protein -0.71 0.34 -0.32
138 AT3G08840 D-alanine--D-alanine ligase family -0.7 0.31 -0.33
139 AT5G04760 Duplicated homeodomain-like superfamily protein -0.7 0.3 -0.31
140 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.7 0.3 -0.3
141 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.31
142 AT5G65760 Serine carboxypeptidase S28 family protein -0.7 0.31 -0.32
143 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.7 0.31 -0.32
144 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.32 -0.31
145 AT5G02310 proteolysis 6 proteolysis 6 -0.7 0.31 -0.31
146 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.7 0.32 -0.31
147 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 -0.7 0.31 -0.29
148 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.7 0.32 -0.32
149 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.7 0.32 -0.33