AT2G10050 : -
Query Information
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AGICode AT2G10050
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G10050 transposable element gene 1 0.29 -0.33
2 AT1G68680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 16 growth stages; Has 20 Blast hits to 20 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.3 -0.35
3 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.7 0.29 -0.31
4 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 0.69 0.32 -0.28
5 AT5G20650 copper transporter 5 copper transporter 5 -0.69 0.33 -0.33
6 AT2G19290 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.33
7 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.66 0.33 -0.32
8 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 -0.66 0.31 -0.32
9 AT2G14950 transposable element gene -0.65 0.32 -0.32
10 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 -0.65 0.3 -0.3
11 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 -0.65 0.33 -0.32
12 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 -0.65 0.33 -0.33
13 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 -0.64 0.32 -0.31
14 AT2G23310 Rer1 family protein ATRER1C1 -0.63 0.34 -0.31
15 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.63 0.31 -0.31
16 AT1G21230 wall associated kinase 5 wall associated kinase 5 -0.63 0.31 -0.32
17 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 -0.63 0.35 -0.33
18 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 -0.62 0.3 -0.3
19 AT5G37210 Cysteine/Histidine-rich C1 domain family protein -0.62 0.32 -0.31
20 AT1G63560 Receptor-like protein kinase-related family protein 0.62 0.32 -0.3
21 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.62 0.32 -0.32
22 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 -0.61 0.31 -0.3
23 AT3G14780 CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: glucan synthase-like 4 (TAIR:AT3G14570.2); Has
315 Blast hits to 313 proteins in 50 species: Archae - 2;
Bacteria - 16; Metazoa - 11; Fungi - 7; Plants - 181;
Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).		 -0.61 0.31 -0.33
24 AT4G17010 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.32 -0.33
25 AT4G18410 transposable element gene 0.61 0.32 -0.3
26 AT4G11440 Mitochondrial substrate carrier family protein 0.6 0.32 -0.3
27 AT5G11640 Thioredoxin superfamily protein -0.6 0.33 -0.31
28 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.6 0.32 -0.33
29 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.3
30 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.6 0.34 -0.32
31 AT4G00960 Protein kinase superfamily protein 0.6 0.31 -0.32
32 AT4G20490 transposable element gene 0.6 0.3 -0.33
33 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 -0.6 0.3 -0.32
34 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.59 0.32 -0.31
35 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.59 0.35 -0.33
36 AT3G24790 Protein kinase superfamily protein 0.59 0.33 -0.3
37 AT2G37880 Protein of unknown function, DUF617 0.59 0.32 -0.33
38 AT2G25690 Protein of unknown function (DUF581) 0.58 0.31 -0.31
39 AT4G35985 Senescence/dehydration-associated protein-related 0.58 0.32 -0.31
40 AT5G57230 Thioredoxin superfamily protein -0.58 0.31 -0.29
41 AT1G49590 C2H2 and C2HC zinc fingers superfamily protein -0.58 0.31 -0.32
42 AT5G54090 DNA mismatch repair protein MutS, type 2 0.58 0.31 -0.32
43 AT5G47150 YDG/SRA domain-containing protein -0.58 0.34 -0.32
44 AT5G11010 Pre-mRNA cleavage complex II protein family -0.58 0.31 -0.34
45 AT3G20700 F-box associated ubiquitination effector family protein 0.58 0.32 -0.3
46 AT5G04500 glycosyltransferase family protein 47 0.57 0.3 -0.32
47 AT3G12530 PSF2 PSF2 -0.57 0.32 -0.32
48 AT2G14835 RING/U-box superfamily protein -0.57 0.33 -0.3
49 AT1G63110 GPI transamidase subunit PIG-U -0.57 0.3 -0.3
50 AT4G35335 Nucleotide-sugar transporter family protein -0.57 0.33 -0.32
51 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.3
52 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 0.57 0.3 -0.31
53 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 -0.57 0.31 -0.3
54 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 -0.57 0.3 -0.32
55 AT2G26680 CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM
(InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins
in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0;
Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451
(source: NCBI BLink).		 -0.57 0.31 -0.3
56 AT4G10310 high-affinity K+ transporter 1 ATHKT1, high-affinity K+
transporter 1		 -0.57 0.31 -0.31
57 AT3G62500 BEST Arabidopsis thaliana protein match is: SET domain
protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.3 -0.3
58 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.34 -0.33
59 AT1G11360 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.57 0.33 -0.31
60 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.56 0.31 -0.31
61 AT2G40730 Protein kinase family protein with ARM repeat domain cytoplasmic tRNA export protein -0.56 0.33 -0.31
62 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.3 -0.32
63 AT1G11040 HSP40/DnaJ peptide-binding protein -0.56 0.31 -0.32
64 AT1G79340 metacaspase 4 metacaspase 4, metacaspase 2d,
metacaspase 4, metacaspase 2d		 -0.56 0.3 -0.33
65 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 -0.56 0.32 -0.31
66 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.56 0.31 -0.3
67 AT4G34215 Domain of unknown function (DUF303) -0.56 0.31 -0.32
68 AT5G25530 DNAJ heat shock family protein 0.56 0.3 -0.32
69 AT3G22650 F-box and associated interaction domains-containing protein S-LOCUS F-BOX 61, CEGENDUO,
S-LOCUS F-BOX 61		 0.56 0.3 -0.32
70 AT4G09520 Cofactor-independent phosphoglycerate mutase -0.55 0.33 -0.32
71 AT1G66310 F-box/RNI-like/FBD-like domains-containing protein 0.55 0.32 -0.31
72 AT4G16030 Ribosomal protein L19e family protein 0.55 0.32 -0.29
73 AT4G03700 transposable element gene 0.55 0.33 -0.31
74 AT1G68920 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.55 0.32 -0.3
75 AT2G30105 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical
subtype (InterPro:IPR003591), Leucine-rich repeat
(InterPro:IPR001611), Ubiquitin (InterPro:IPR000626),
Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis
thaliana protein match is: Leucine-rich repeat (LRR) family
protein (TAIR:AT5G07910.1).		 -0.55 0.34 -0.3
76 AT3G60790 F-box family protein 0.55 0.31 -0.31
77 AT5G52330 TRAF-like superfamily protein 0.55 0.33 -0.31
78 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 -0.55 0.32 -0.32
79 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.32
80 AT5G22540 Plant protein of unknown function (DUF247) 0.55 0.32 -0.33
81 AT5G03640 Protein kinase superfamily protein -0.55 0.33 -0.31
82 AT3G19610 Plant protein of unknown function (DUF936) -0.55 0.31 -0.32
83 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 0.55 0.33 -0.33
84 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.55 0.32 -0.32
85 AT1G70990 proline-rich family protein -0.55 0.34 -0.31
86 AT5G18220 O-Glycosyl hydrolases family 17 protein -0.55 0.34 -0.3
87 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D -0.55 0.33 -0.31
88 AT1G71840 transducin family protein / WD-40 repeat family protein -0.54 0.32 -0.31
89 AT3G23160 Protein of unknown function (DUF668) 0.54 0.33 -0.34
90 AT3G06210 ARM repeat superfamily protein 0.54 0.33 -0.33
91 AT5G10420 MATE efflux family protein 0.54 0.33 -0.31
92 AT4G13080 xyloglucan endotransglucosylase/hydrolase 1 xyloglucan
endotransglucosylase/hydrolase 1		 0.54 0.31 -0.32
93 AT4G35335 Nucleotide-sugar transporter family protein -0.54 0.33 -0.29
94 AT2G05580 Glycine-rich protein family 0.54 0.31 -0.31
95 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.54 0.31 -0.32
96 AT2G05550 transposable element gene 0.54 0.3 -0.3
97 AT2G04670 transposable element gene 0.54 0.32 -0.32
98 AT1G32210 Defender against death (DAD family) protein DEFENDER AGAINST APOPTOTIC DEATH 1 -0.53 0.29 -0.3
99 AT5G28860 transposable element gene -0.53 0.29 -0.33
100 AT1G66210 Subtilisin-like serine endopeptidase family protein -0.53 0.31 -0.33
101 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 -0.53 0.32 -0.31
102 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.34 -0.32
103 AT5G58240 FRAGILE HISTIDINE TRIAD FRAGILE HISTIDINE TRIAD -0.53 0.35 -0.34
104 AT3G45060 high affinity nitrate transporter 2.6 ARABIDOPSIS THALIANA HIGH AFFINITY
NITRATE TRANSPORTER 2.6, high
affinity nitrate transporter 2.6		 0.53 0.31 -0.3
105 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 -0.53 0.31 -0.32
106 AT3G45330 Concanavalin A-like lectin protein kinase family protein -0.53 0.33 -0.32
107 AT5G54220 Cysteine-rich protein 0.53 0.3 -0.33
108 AT3G53550 FBD-like domain family protein 0.52 0.32 -0.32
109 AT1G41900 transposable element gene 0.52 0.32 -0.31
110 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.52 0.3 -0.32
111 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 0.52 0.31 -0.3
112 AT3G07150 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.31 -0.31
113 AT2G16520 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: zinc
finger (C3HC4-type RING finger) family protein
(TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.31 -0.31
114 AT1G48220 Protein kinase superfamily protein 0.52 0.32 -0.33
115 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 0.51 0.3 -0.32
116 AT1G30790 F-box and associated interaction domains-containing protein 0.51 0.31 -0.33
117 AT2G28240 ATP-dependent helicase family protein 0.51 0.3 -0.33
118 AT1G26500 Pentatricopeptide repeat (PPR) superfamily protein 0.5 0.32 -0.3
119 AT1G72350 MADS-box transcription factor family protein 0.5 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.67 0.48 -0.46 C0018
121 C0181 MST_2904.3 - - - -0.65 0.46 -0.43