AT2G04410 : -
Query Information
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AGICode AT2G04410
Description RPM1-interacting protein 4 (RIN4) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein 1 0.32 -0.32
2 AT3G07470 Protein of unknown function, DUF538 0.8 0.31 -0.32
3 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.8 0.31 -0.3
4 AT3G04830 Protein prenylyltransferase superfamily protein 0.76 0.31 -0.32
5 AT4G00300 fringe-related protein 0.76 0.31 -0.32
6 AT1G72570 Integrase-type DNA-binding superfamily protein 0.75 0.34 -0.34
7 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.74 0.3 -0.32
8 AT1G71900 Protein of unknown function (DUF803) 0.73 0.35 -0.35
9 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.3 -0.31
10 AT1G15370 SNARE-like superfamily protein 0.73 0.32 -0.34
11 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.72 0.32 -0.32
12 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED 0.72 0.33 -0.31
13 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.72 0.31 -0.31
14 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.31
15 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.29 -0.33
16 AT3G54930 Protein phosphatase 2A regulatory B subunit family protein 0.71 0.32 -0.31
17 AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.29
18 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 0.71 0.33 -0.33
19 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.71 0.33 -0.31
20 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.71 0.33 -0.31
21 AT3G63420 Ggamma-subunit 1 Ggamma-subunit 1, ATAGG1,
Ggamma-subunit 1		 0.71 0.32 -0.33
22 AT3G44780 Cysteine proteinases superfamily protein 0.7 0.3 -0.33
23 AT5G65240 Leucine-rich repeat protein kinase family protein -0.7 0.32 -0.29
24 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein 0.7 0.3 -0.32
25 AT1G30540 Actin-like ATPase superfamily protein 0.69 0.34 -0.31
26 AT2G35300 Late embryogenesis abundant protein, group 1 protein late embryogenesis abundant 4-2,
late embryogenesis abundant 18,
late embryogenesis abundant 4-2		 -0.69 0.33 -0.33
27 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 0.69 0.31 -0.34
28 AT5G19630 alpha/beta-Hydrolases superfamily protein 0.69 0.35 -0.32
29 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 0.69 0.3 -0.31
30 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.69 0.3 -0.32
31 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.29 -0.33
32 AT3G05500 Rubber elongation factor protein (REF) 0.68 0.32 -0.34
33 AT1G42460 transposable element gene -0.68 0.31 -0.3
34 AT1G67620 Lojap-related protein 0.68 0.3 -0.31
35 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.68 0.31 -0.31
36 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 0.68 0.31 -0.32
37 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein 0.68 0.32 -0.29
38 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.67 0.32 -0.32
39 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 -0.67 0.32 -0.33
40 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 -0.67 0.3 -0.32
41 AT1G44050 Cysteine/Histidine-rich C1 domain family protein 0.67 0.31 -0.32
42 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.67 0.31 -0.33
43 AT2G05200 transposable element gene -0.67 0.3 -0.31
44 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.33 -0.3
45 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.31 -0.32
46 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.67 0.31 -0.32
47 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.67 0.33 -0.33
48 AT3G25260 Major facilitator superfamily protein -0.66 0.31 -0.32
49 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.34 -0.32
50 AT4G26100 casein kinase 1 casein kinase 1, CKL1 0.66 0.3 -0.31
51 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.32 -0.33
52 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 0.66 0.32 -0.28
53 AT1G17680 tetratricopeptide repeat (TPR)-containing protein -0.66 0.3 -0.32
54 AT5G39390 Leucine-rich repeat protein kinase family protein 0.66 0.32 -0.33
55 AT3G52220 CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain
(InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins
in 346 species: Archae - 10; Bacteria - 184; Metazoa -
3955; Fungi - 1221; Plants - 712; Viruses - 24; Other
Eukaryotes - 2776 (source: NCBI BLink).		 0.65 0.31 -0.32
56 AT2G06820 transposable element gene -0.65 0.32 -0.31
57 AT2G23940 Protein of unknown function (DUF788) 0.65 0.32 -0.33
58 AT1G47830 SNARE-like superfamily protein 0.65 0.34 -0.31
59 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 0.65 0.32 -0.33
60 AT5G51180 alpha/beta-Hydrolases superfamily protein 0.65 0.33 -0.33
61 AT5G07370 inositol polyphosphate kinase 2 alpha INOSITOL POLYPHOSPHATE KINASE 2
ALPHA, inositol polyphosphate
kinase 2 alpha		 0.65 0.3 -0.32
62 AT5G17720 alpha/beta-Hydrolases superfamily protein 0.65 0.31 -0.31
63 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.31 -0.3
64 AT3G52470 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.65 0.3 -0.32
65 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.34 -0.29
66 AT2G27410 Domain of unknown function (DUF313) 0.64 0.31 -0.31
67 AT1G43570 transposable element gene -0.64 0.32 -0.32
68 AT4G17430 O-fucosyltransferase family protein 0.64 0.31 -0.31
69 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.33 -0.29
70 AT2G02660 F-box associated ubiquitination effector family protein 0.64 0.31 -0.3
71 AT3G05490 ralf-like 22 ralf-like 22 0.64 0.3 -0.32
72 AT5G51340 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.33
73 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 0.64 0.31 -0.31
74 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.64 0.31 -0.31
75 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.33
76 AT1G23520 Domain of unknown function (DUF220) -0.63 0.34 -0.3
77 AT5G15020 SIN3-like 2 SIN3-like 2 -0.63 0.29 -0.32
78 AT5G42600 marneral synthase marneral synthase -0.62 0.3 -0.31
79 AT2G27390 proline-rich family protein -0.62 0.32 -0.32
80 AT5G51290 Diacylglycerol kinase family protein -0.62 0.31 -0.31
81 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.62 0.34 -0.32
82 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.3 -0.31
83 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.62 0.31 -0.32
84 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein -0.62 0.31 -0.34
85 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.33
86 AT5G19310 Homeotic gene regulator -0.61 0.3 -0.33
87 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.6 0.3 -0.33
88 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 -0.6 0.33 -0.32
89 AT2G07650 transposable element gene -0.6 0.29 -0.31
90 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 -0.6 0.31 -0.3
91 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.31 -0.31
92 AT3G04150 RmlC-like cupins superfamily protein -0.6 0.31 -0.31
93 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.32
94 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.59 0.32 -0.3
95 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 -0.59 0.3 -0.31
96 AT2G29770 Galactose oxidase/kelch repeat superfamily protein -0.59 0.32 -0.3
97 AT3G46070 C2H2-type zinc finger family protein -0.59 0.31 -0.3
98 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 -0.59 0.31 -0.3
99 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 -0.59 0.29 -0.33
100 AT3G09750 Galactose oxidase/kelch repeat superfamily protein -0.59 0.3 -0.3
101 AT3G43100 transposable element gene -0.58 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.7 0.47 -0.45 C0210