AGICode | AT2G36920 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
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pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G36920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.31 |
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2 | AT1G26370 | RNA helicase family protein | -0.72 | 0.3 | -0.31 |
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3 | AT3G04740 | RNA polymerase II transcription mediators | ARABIDOPSIS MEDIATOR COMPONENTS 14, MEDIATOR COMPONENTS 14, STRUWWELPETER |
-0.7 | 0.3 | -0.32 |
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4 | AT5G64420 | DNA polymerase V family | -0.69 | 0.3 | -0.31 |
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5 | AT5G39370 | Curculin-like (mannose-binding) lectin family protein | 0.69 | 0.34 | -0.3 |
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6 | AT1G48180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.32 | -0.33 |
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7 | AT2G47160 | HCO3- transporter family | AtBOR1, REQUIRES HIGH BORON 1 | -0.68 | 0.33 | -0.31 |
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8 | AT2G16880 | Pentatricopeptide repeat (PPR) superfamily protein | -0.68 | 0.29 | -0.31 |
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9 | AT3G44530 | homolog of histone chaperone HIRA | homolog of histone chaperone HIRA | -0.68 | 0.31 | -0.33 |
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10 | AT1G76400 | Ribophorin I | -0.68 | 0.3 | -0.33 |
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11 | AT1G35647 | transposable element gene | 0.68 | 0.31 | -0.34 |
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12 | AT2G10760 | transposable element gene | -0.67 | 0.33 | -0.31 |
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13 | AT4G38090 | Ribosomal protein S5 domain 2-like superfamily protein | 0.67 | 0.3 | -0.32 |
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14 | AT1G22010 | unknown protein; Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 |
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15 | AT2G17510 | ribonuclease II family protein | EMBRYO DEFECTIVE 2763 | -0.67 | 0.31 | -0.33 |
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16 | AT1G28327 | unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.3 | -0.32 |
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17 | AT2G16835 | Aquaporin-like superfamily protein | -0.66 | 0.32 | -0.3 |
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18 | AT4G08210 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.66 | 0.31 | -0.33 |
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19 | AT1G21340 | Dof-type zinc finger DNA-binding family protein | -0.66 | 0.3 | -0.33 |
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20 | AT1G78200 | Protein phosphatase 2C family protein | 0.66 | 0.32 | -0.33 |
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21 | AT3G16890 | pentatricopeptide (PPR) domain protein 40 | pentatricopeptide (PPR) domain protein 40 |
-0.66 | 0.33 | -0.33 |
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22 | AT3G28720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). |
-0.66 | 0.31 | -0.32 |
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23 | ATMG00680 | hypothetical protein | ORF122C | 0.66 | 0.3 | -0.31 |
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24 | AT5G12080 | mechanosensitive channel of small conductance-like 10 | ATMSL10, mechanosensitive channel of small conductance-like 10 |
-0.65 | 0.32 | -0.32 |
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25 | AT2G29220 | Concanavalin A-like lectin protein kinase family protein | -0.65 | 0.32 | -0.32 |
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26 | AT1G16480 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.65 | 0.28 | -0.29 |
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27 | AT2G10640 | transposable element gene | 0.64 | 0.3 | -0.3 |
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28 | AT1G03830 | guanylate-binding family protein | -0.64 | 0.33 | -0.32 |
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29 | AT2G34750 | RNA polymerase I specific transcription initiation factor RRN3 protein |
-0.64 | 0.32 | -0.3 |
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30 | AT4G10280 | RmlC-like cupins superfamily protein | 0.64 | 0.3 | -0.33 |
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31 | AT4G03750 | transposable element gene | -0.64 | 0.32 | -0.31 |
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32 | AT1G60380 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
0.63 | 0.3 | -0.32 |
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33 | AT5G47420 | Tryptophan RNA-binding attenuator protein-like | 0.63 | 0.31 | -0.33 |
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34 | AT3G19070 | Homeodomain-like superfamily protein | -0.63 | 0.35 | -0.32 |
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35 | AT1G33250 | Protein of unknown function (DUF604) | -0.63 | 0.3 | -0.31 |
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36 | AT2G21390 | Coatomer, alpha subunit | -0.62 | 0.32 | -0.33 |
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37 | AT4G34330 | Protein of unknown function (DUF677) | -0.62 | 0.31 | -0.29 |
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38 | AT1G59670 | glutathione S-transferase TAU 15 | glutathione S-transferase TAU 15, glutathione S-transferase TAU 15 |
0.62 | 0.31 | -0.31 |
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39 | AT3G60270 | Cupredoxin superfamily protein | -0.62 | 0.3 | -0.32 |
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40 | AT2G23360 | Plant protein of unknown function (DUF869) | -0.62 | 0.33 | -0.31 |
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41 | AT4G15350 | cytochrome P450, family 705, subfamily A, polypeptide 2 | cytochrome P450, family 705, subfamily A, polypeptide 2 |
-0.62 | 0.31 | -0.34 |
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42 | AT5G27810 | MADS-box transcription factor family protein | 0.62 | 0.29 | -0.3 |
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43 | AT1G05880 | RING/U-box superfamily protein | ARIADNE 12, ARABIDOPSIS ARIADNE 12 | 0.62 | 0.32 | -0.31 |
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44 | AT5G65900 | DEA(D/H)-box RNA helicase family protein | -0.62 | 0.34 | -0.33 |
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45 | AT1G68270 | AMP-dependent synthetase and ligase family protein | -0.62 | 0.32 | -0.32 |
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46 | AT4G16920 | Disease resistance protein (TIR-NBS-LRR class) family | -0.62 | 0.32 | -0.34 |
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47 | AT3G16610 | pentatricopeptide (PPR) repeat-containing protein | -0.62 | 0.31 | -0.31 |
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48 | AT2G22750 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.62 | 0.32 | -0.31 |
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49 | AT2G02830 | transposable element gene | -0.62 | 0.31 | -0.31 |
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50 | AT4G03690 | transposable element gene | -0.62 | 0.32 | -0.29 |
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51 | AT2G14810 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 |
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52 | AT4G03090 | sequence-specific DNA binding;sequence-specific DNA binding transcription factors |
-0.61 | 0.33 | -0.32 |
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53 | AT3G03260 | homeodomain GLABROUS 8 | homeodomain GLABROUS 8 | 0.61 | 0.29 | -0.31 |
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54 | AT5G46100 | Pentatricopeptide repeat (PPR) superfamily protein | -0.61 | 0.32 | -0.33 |
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55 | AT4G31160 | DDB1-CUL4 associated factor 1 | DDB1-CUL4 associated factor 1 | -0.61 | 0.3 | -0.32 |
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56 | AT5G25410 | Protein of Unknown Function (DUF239) | -0.61 | 0.31 | -0.32 |
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57 | AT1G71830 | somatic embryogenesis receptor-like kinase 1 | SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, somatic embryogenesis receptor-like kinase 1 |
-0.61 | 0.33 | -0.31 |
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58 | AT5G04630 | cytochrome P450, family 77, subfamily A, polypeptide 9 | cytochrome P450, family 77, subfamily A, polypeptide 9 |
0.6 | 0.33 | -0.34 |
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59 | AT1G62940 | acyl-CoA synthetase 5 | acyl-CoA synthetase 5 | -0.6 | 0.33 | -0.33 |
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60 | AT1G08410 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.6 | 0.3 | -0.31 |
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61 | AT5G44440 | FAD-binding Berberine family protein | -0.6 | 0.33 | -0.32 |
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62 | AT1G50760 | Aminotransferase-like, plant mobile domain family protein | -0.6 | 0.32 | -0.29 |
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63 | AT4G23310 | cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | cysteine-rich RLK (RECEPTOR-like protein kinase) 23 |
0.6 | 0.32 | -0.32 |
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64 | AT1G32270 | syntaxin, putative | ATSYP24, SYNTAXIN 24 | 0.6 | 0.32 | -0.33 |
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65 | AT3G24080 | KRR1 family protein | -0.6 | 0.31 | -0.3 |
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66 | AT4G04470 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | PMP22 | 0.6 | 0.31 | -0.3 |
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67 | AT4G39753 | Galactose oxidase/kelch repeat superfamily protein | 0.59 | 0.32 | -0.32 |
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68 | AT5G19430 | RING/U-box superfamily protein | 0.59 | 0.33 | -0.32 |
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69 | AT3G21590 | Senescence/dehydration-associated protein-related | 0.59 | 0.33 | -0.34 |
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70 | AT1G47680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.32 | -0.3 |
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71 | AT3G53080 | D-galactoside/L-rhamnose binding SUEL lectin protein | 0.59 | 0.31 | -0.33 |
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72 | AT3G11530 | Vacuolar protein sorting 55 (VPS55) family protein | 0.59 | 0.32 | -0.31 |
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73 | AT3G54980 | Pentatricopeptide repeat (PPR) superfamily protein | -0.59 | 0.33 | -0.33 |
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74 | AT1G77990 | STAS domain / Sulfate transporter family | AST56, SULPHATE TRANSPORTER 2;2 | 0.59 | 0.32 | -0.33 |
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75 | AT4G18720 | Transcription factor IIS protein | 0.58 | 0.31 | -0.32 |
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76 | AT1G23750 | Nucleic acid-binding, OB-fold-like protein | 0.58 | 0.3 | -0.31 |
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77 | AT3G52030 | F-box family protein with WD40/YVTN repeat doamin | 0.58 | 0.29 | -0.31 |
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78 | AT2G03880 | Pentatricopeptide repeat (PPR) superfamily protein | required for efficiency of mitochondrial editing 1 |
-0.58 | 0.31 | -0.33 |
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79 | AT2G42180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.58 | 0.3 | -0.31 |
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80 | AT5G48950 | Thioesterase superfamily protein | 0.58 | 0.3 | -0.33 |
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81 | AT5G60040 | nuclear RNA polymerase C1 | nuclear RNA polymerase C1 | -0.58 | 0.32 | -0.34 |
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82 | AT1G73290 | serine carboxypeptidase-like 5 | serine carboxypeptidase-like 5 | 0.58 | 0.32 | -0.31 |
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83 | AT2G40310 | Pectin lyase-like superfamily protein | 0.58 | 0.32 | -0.33 |
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84 | AT2G33530 | serine carboxypeptidase-like 46 | serine carboxypeptidase-like 46 | 0.58 | 0.31 | -0.31 |
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85 | AT2G07455 | transposable element gene | 0.58 | 0.34 | -0.32 |
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86 | AT5G03280 | NRAMP metal ion transporter family protein | ATEIN2, CYTOKININ RESISTANT 1, ETHYLENE INSENSITIVE 2, ENHANCED RESPONSE TO ABA3, ORESARA 2, ORESARA 3, PIR2 |
-0.58 | 0.32 | -0.3 |
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87 | AT3G03880 | Protein of unknown function (DUF1639) | 0.58 | 0.31 | -0.33 |
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88 | AT5G44880 | transposable element gene | 0.58 | 0.32 | -0.32 |
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89 | AT1G31620 | unknown protein; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.33 |
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90 | AT5G66250 | kinectin-related | 0.57 | 0.32 | -0.29 |
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91 | AT5G27050 | AGAMOUS-like 101 | AGAMOUS-like 101 | -0.57 | 0.31 | -0.29 |
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92 | AT2G05120 | Nucleoporin, Nup133/Nup155-like | -0.57 | 0.32 | -0.31 |
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93 | AT3G22670 | Pentatricopeptide repeat (PPR) superfamily protein | -0.57 | 0.3 | -0.33 |
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94 | AT5G53840 | F-box/RNI-like/FBD-like domains-containing protein | 0.57 | 0.33 | -0.34 |
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95 | AT2G02620 | Cysteine/Histidine-rich C1 domain family protein | 0.57 | 0.3 | -0.32 |
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96 | AT5G24540 | beta glucosidase 31 | beta glucosidase 31 | 0.57 | 0.3 | -0.32 |
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97 | AT2G47680 | zinc finger (CCCH type) helicase family protein | -0.57 | 0.32 | -0.31 |
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98 | AT3G43420 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.32 | -0.32 |
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99 | AT1G50470 | F-box associated ubiquitination effector family protein | -0.57 | 0.33 | -0.3 |
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100 | AT5G66130 | RADIATION SENSITIVE 17 | RADIATION SENSITIVE 17, RADIATION SENSITIVE 17 |
-0.57 | 0.33 | -0.31 |
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101 | AT4G17483 | alpha/beta-Hydrolases superfamily protein | 0.57 | 0.3 | -0.31 |
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102 | AT5G12280 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein |
0.57 | 0.32 | -0.3 |
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103 | AT5G14470 | GHMP kinase family protein | 0.57 | 0.32 | -0.32 |
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104 | AT5G63135 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.57 | 0.3 | -0.31 |
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105 | AT5G61120 | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.57 | 0.32 | -0.32 |
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106 | AT1G74260 | purine biosynthesis 4 | purine biosynthesis 4 | -0.57 | 0.33 | -0.31 |
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107 | AT1G50340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.57 | 0.31 | -0.33 |
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108 | AT1G30290 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.56 | 0.34 | -0.33 |
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109 | AT5G26610 | D111/G-patch domain-containing protein | 0.56 | 0.31 | -0.33 |
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110 | AT3G30220 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits to 30 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.29 | -0.32 |
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111 | AT1G21550 | Calcium-binding EF-hand family protein | 0.56 | 0.31 | -0.3 |
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112 | AT1G61440 | S-locus lectin protein kinase family protein | 0.56 | 0.31 | -0.32 |
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113 | AT3G46070 | C2H2-type zinc finger family protein | -0.56 | 0.31 | -0.32 |
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114 | AT3G30846 | transposable element gene | 0.56 | 0.32 | -0.31 |
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115 | AT1G37140 | MEI2 C-terminal RRM only like 1 | MEI2 C-terminal RRM only like 1 | 0.56 | 0.33 | -0.33 |
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116 | AT4G39756 | Galactose oxidase/kelch repeat superfamily protein | 0.56 | 0.32 | -0.34 |
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117 | AT5G19700 | MATE efflux family protein | -0.56 | 0.31 | -0.31 |
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118 | AT4G07920 | transposable element gene | 0.56 | 0.32 | -0.31 |
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119 | AT5G49260 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.33 | -0.32 |
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120 | AT1G73400 | Pentatricopeptide repeat (PPR) superfamily protein | -0.56 | 0.3 | -0.32 |
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121 | ATMG01410 | open reading frame 204 | open reading frame 204 | 0.56 | 0.31 | -0.31 |
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122 | AT5G09500 | Ribosomal protein S19 family protein | -0.56 | 0.3 | -0.32 |
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123 | AT5G60570 | Galactose oxidase/kelch repeat superfamily protein | -0.56 | 0.32 | -0.33 |
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124 | AT2G22100 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.56 | 0.31 | -0.34 |
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125 | AT5G01440 | BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT1G06900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.56 | 0.33 | -0.33 |
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126 | AT2G41570 | transposable element gene | 0.56 | 0.31 | -0.33 |
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127 | AT1G40150 | transposable element gene | 0.56 | 0.31 | -0.32 |
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128 | AT1G27090 | glycine-rich protein | -0.55 | 0.31 | -0.33 |
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129 | AT5G38910 | RmlC-like cupins superfamily protein | -0.55 | 0.29 | -0.3 |
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130 | AT2G40740 | WRKY DNA-binding protein 55 | WRKY DNA-BINDING PROTEIN 55, WRKY DNA-binding protein 55 |
-0.55 | 0.3 | -0.31 |
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131 | AT3G14950 | tetratricopetide-repeat thioredoxin-like 2 | tetratricopetide-repeat thioredoxin-like 2 |
0.55 | 0.32 | -0.32 |
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132 | AT2G06630 | transposable element gene | -0.55 | 0.31 | -0.3 |
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133 | AT2G13230 | transposable element gene | -0.55 | 0.3 | -0.34 |
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134 | AT5G09780 | Transcriptional factor B3 family protein | -0.55 | 0.32 | -0.32 |
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135 | AT4G15250 | B-box type zinc finger protein with CCT domain | 0.55 | 0.29 | -0.33 |
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136 | AT2G20170 | Protein of Unknown Function (DUF239) | -0.55 | 0.33 | -0.31 |
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137 | AT2G26850 | F-box family protein | 0.55 | 0.31 | -0.3 |
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138 | AT1G43870 | transposable element gene | 0.55 | 0.32 | -0.33 |
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139 | AT1G27720 | TBP-associated factor 4B | TBP-associated factor 4, TBP-associated factor 4B |
0.54 | 0.32 | -0.3 |
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140 | AT1G23680 | Domain of unknown function (DUF220) | 0.54 | 0.32 | -0.32 |
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141 | AT4G14385 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.54 | 0.31 | -0.32 |
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142 | AT5G37980 | Zinc-binding dehydrogenase family protein | 0.54 | 0.33 | -0.31 |
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143 | AT3G62180 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.54 | 0.32 | -0.31 |
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