AT2G36400 : growth-regulating factor 3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G36400
Description growth-regulating factor 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 1 0.31 -0.34
2 AT1G14685 basic pentacysteine 2 BASIC PENTACYSTEINE 2, BBR/BPC2,
basic pentacysteine 2		 0.76 0.31 -0.32
3 AT2G42870 phy rapidly regulated 1 HELIX-LOOP-HELIX 1, PHY RAPIDLY
REGULATED 1		 0.75 0.32 -0.31
4 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.71 0.3 -0.3
5 AT2G20240 Protein of unknown function (DUF3741) 0.7 0.3 -0.33
6 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 0.7 0.33 -0.31
7 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.7 0.29 -0.32
8 AT2G46370 Auxin-responsive GH3 family protein FAR-RED INSENSITIVE 219, JASMONATE
RESISTANT 1		 -0.69 0.29 -0.3
9 AT5G24690 Protein of unknown function (DUF3411) 0.69 0.28 -0.33
10 AT1G69040 ACT domain repeat 4 ACT domain repeat 4 0.69 0.3 -0.32
11 AT5G67260 CYCLIN D3;2 CYCLIN D3;2 0.67 0.31 -0.3
12 AT2G02800 protein kinase 2B protein kinase 2B, kinase 2 0.66 0.3 -0.31
13 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.33 -0.31
14 AT3G55005 tonneau 1b (TON1b) tonneau 1b 0.66 0.3 -0.34
15 AT2G36660 poly(A) binding protein 7 poly(A) binding protein 7 0.65 0.33 -0.31
16 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.65 0.3 -0.29
17 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.28 -0.3
18 AT1G09360 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.32 -0.32
19 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 0.64 0.31 -0.31
20 AT1G03470 Kinase interacting (KIP1-like) family protein 0.64 0.31 -0.31
21 AT3G60390 homeobox-leucine zipper protein 3 homeobox-leucine zipper protein 3 0.64 0.29 -0.33
22 AT1G80230 Rubredoxin-like superfamily protein -0.64 0.33 -0.31
23 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.63 0.3 -0.32
24 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 -0.63 0.32 -0.32
25 AT2G43420 3-beta hydroxysteroid dehydrogenase/isomerase family
protein		 -0.63 0.33 -0.31
26 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 0.63 0.3 -0.31
27 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.63 0.31 -0.34
28 AT1G33660 peroxidase family protein -0.63 0.32 -0.31
29 AT3G12750 zinc transporter 1 precursor zinc transporter 1 precursor -0.63 0.32 -0.32
30 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.34
31 AT3G45530 Cysteine/Histidine-rich C1 domain family protein -0.62 0.3 -0.31
32 AT4G22770 AT hook motif DNA-binding family protein -0.62 0.34 -0.31
33 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.31 -0.3
34 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.31 -0.3
35 AT3G45730 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.31
36 AT2G43280 Far-red impaired responsive (FAR1) family protein 0.61 0.31 -0.3
37 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 0.61 0.32 -0.34
38 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.61 0.3 -0.31
39 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 0.6 0.31 -0.3
40 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 -0.6 0.32 -0.33
41 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.6 0.32 -0.32
42 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.6 0.32 -0.33
43 AT3G07640 unknown protein; Has 27 Blast hits to 27 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.3 -0.32
44 AT5G57810 tetraspanin15 tetraspanin15 -0.6 0.34 -0.33
45 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.3
46 AT5G20610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits
to 759 proteins in 180 species: Archae - 6; Bacteria - 105;
Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other
Eukaryotes - 282 (source: NCBI BLink).		 0.6 0.31 -0.31
47 AT3G11490 rac GTPase activating protein 0.6 0.33 -0.33
48 AT1G05770 Mannose-binding lectin superfamily protein 0.6 0.33 -0.33
49 AT4G05330 ARF-GAP domain 13 ARF-GAP domain 13 0.6 0.31 -0.34
50 AT1G48220 Protein kinase superfamily protein -0.6 0.31 -0.32
51 AT1G46912 F-box associated ubiquitination effector family protein -0.59 0.3 -0.31
52 AT1G29050 TRICHOME BIREFRINGENCE-LIKE 38 TRICHOME BIREFRINGENCE-LIKE 38 -0.59 0.33 -0.31
53 AT2G14930 transposable element gene -0.59 0.3 -0.3
54 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.33
55 AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA -0.58 0.31 -0.33
56 AT3G08550 elongation defective 1 protein / ELD1 protein ABA INSENSITIVE 8, ELONGATION
DEFECTIVE 1, KOBITO		 0.58 0.31 -0.33
57 AT4G10910 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.31
58 AT5G10180 slufate transporter 2;1 ARABIDOPSIS SULFATE TRANSPORTER
68, sulfate transporter 2;1		 -0.58 0.32 -0.31
59 AT5G66630 DA1-related protein 5 DA1-related protein 5 -0.58 0.31 -0.33
60 AT1G14100 fucosyltransferase 8 fucosyltransferase 8 0.58 0.32 -0.32
61 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 0.58 0.31 -0.32
62 AT5G07040 RING/U-box superfamily protein 0.58 0.31 -0.31
63 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.58 0.32 -0.34
64 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 0.58 0.31 -0.3
65 AT1G15700 ATPase, F1 complex, gamma subunit protein ATPC2 0.58 0.33 -0.31
66 AT5G28860 transposable element gene 0.57 0.32 -0.3
67 AT5G59780 myb domain protein 59 MYB DOMAIN PROTEIN 59, ATMYB59-1,
ATMYB59-2, ATMYB59-3, myb domain
protein 59		 -0.57 0.31 -0.31
68 AT1G34270 Exostosin family protein 0.57 0.31 -0.31
69 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.57 0.32 -0.29
70 AT4G04490 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 cysteine-rich RLK (RECEPTOR-like
protein kinase) 36		 -0.57 0.3 -0.31
71 AT1G03430 histidine-containing phosphotransfer factor 5 histidine-containing
phosphotransfer factor 5		 -0.57 0.31 -0.31
72 AT3G12470 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.57 0.32 -0.31
73 AT5G55560 Protein kinase superfamily protein -0.57 0.32 -0.31
74 AT2G32120 heat-shock protein 70T-2 heat-shock protein 70T-2 -0.57 0.32 -0.31
75 AT1G65910 NAC domain containing protein 28 NAC domain containing protein 28,
NAC domain containing protein 28		 0.57 0.34 -0.31
76 AT5G15330 SPX domain gene 4 ARABIDOPSIS THALIANA SPX DOMAIN
GENE 4, SPX domain gene 4		 0.57 0.33 -0.32
77 AT5G18410 transcription activators ATSRA1, KLUNKER, PIROGI, PIROGI
121, PIRP, SRA1		 0.57 0.31 -0.31
78 AT4G33870 Peroxidase superfamily protein -0.57 0.31 -0.32
79 AT5G66560 Phototropic-responsive NPH3 family protein 0.57 0.3 -0.32
80 AT2G30690 Protein of unknown function, DUF593 0.56 0.33 -0.32
81 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.56 0.31 -0.31
82 AT2G19150 Pectin lyase-like superfamily protein 0.56 0.33 -0.31
83 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 -0.56 0.31 -0.31
84 AT1G52740 histone H2A protein 9 histone H2A protein 9 0.56 0.32 -0.32
85 AT1G66480 plastid movement impaired 2 -0.55 0.32 -0.31
86 AT1G75760 ER lumen protein retaining receptor family protein -0.55 0.32 -0.3
87 AT4G12400 stress-inducible protein, putative Hop3 -0.55 0.3 -0.33
88 AT4G36460 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.32 -0.3
89 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.29 -0.31
90 AT5G25450 Cytochrome bd ubiquinol oxidase, 14kDa subunit -0.54 0.32 -0.32
91 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.33 -0.31
92 AT4G00955 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana
protein match is: Protein kinase superfamily protein
(TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.3 -0.31
93 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 -0.54 0.31 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.75 0.42 -0.42 C0228
95 C0181 MST_2904.3 - - - 0.66 0.45 -0.44