AT2G35920 : -
Query Information
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AGICode AT2G35920
Description RNA helicase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G35920 RNA helicase family protein 1 0.28 -0.32
2 AT2G02850 plantacyanin plantacyanin 0.74 0.32 -0.29
3 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.33 -0.31
4 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 0.71 0.31 -0.29
5 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 0.71 0.31 -0.32
6 AT2G37920 copper ion transmembrane transporters embryo defective 1513 -0.7 0.31 -0.34
7 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19		 0.69 0.34 -0.3
8 AT5G08320 CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein,
C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149
proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa -
79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
35 (source: NCBI BLink).		 -0.69 0.31 -0.33
9 AT1G69690 TCP family transcription factor AtTCP15, TEOSINTE
BRANCHED1/CYCLOIDEA/PCF 15		 -0.69 0.3 -0.32
10 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 0.69 0.33 -0.31
11 AT2G22420 Peroxidase superfamily protein 0.68 0.32 -0.33
12 AT1G30760 FAD-binding Berberine family protein 0.68 0.31 -0.33
13 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 0.68 0.32 -0.31
14 AT5G57810 tetraspanin15 tetraspanin15 0.67 0.3 -0.32
15 AT2G38370 Plant protein of unknown function (DUF827) 0.67 0.33 -0.32
16 AT1G80080 Leucine-rich repeat (LRR) family protein Receptor Like Protein 17, TOO MANY
MOUTHS		 -0.67 0.31 -0.32
17 AT2G32280 Protein of unknown function (DUF1218) 0.67 0.3 -0.29
18 AT1G71695 Peroxidase superfamily protein -0.67 0.33 -0.3
19 AT1G09380 nodulin MtN21 /EamA-like transporter family protein 0.66 0.31 -0.34
20 AT4G28770 Tetraspanin family protein -0.66 0.31 -0.31
21 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION -0.66 0.32 -0.33
22 AT4G30230 unknown protein; Has 42 Blast hits to 42 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.35
23 AT5G47600 HSP20-like chaperones superfamily protein 0.66 0.33 -0.31
24 AT2G40880 cystatin A cystatin A, cystatin A, FL3-27 -0.66 0.31 -0.31
25 AT1G05577 Domain of unknown function (DUF966) 0.66 0.31 -0.31
26 AT1G34110 Leucine-rich receptor-like protein kinase family protein 0.66 0.31 -0.31
27 AT5G61310 Cytochrome c oxidase subunit Vc family protein 0.65 0.32 -0.32
28 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 0.65 0.31 -0.33
29 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 0.65 0.32 -0.31
30 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.32 -0.32
31 AT5G45320 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: inflorescence meristem, root, flower;
EXPRESSED DURING: petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis
abundant protein, group 2 (InterPro:IPR004864); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.33
32 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.65 0.31 -0.34
33 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.34 -0.3
34 AT2G01100 unknown protein; Has 19420 Blast hits to 10641 proteins in
779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257;
Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes
- 4708 (source: NCBI BLink).		 0.64 0.33 -0.31
35 AT3G59220 pirin ATPIRIN1, pirin, PRN1 0.64 0.32 -0.33
36 AT2G25220 Protein kinase superfamily protein -0.64 0.29 -0.32
37 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.64 0.33 -0.31
38 AT1G65910 NAC domain containing protein 28 NAC domain containing protein 28,
NAC domain containing protein 28		 -0.64 0.32 -0.31
39 AT3G56240 copper chaperone copper chaperone -0.63 0.32 -0.3
40 AT5G39820 NAC domain containing protein 94 NAC domain containing protein 94,
NAC domain containing protein 94		 0.63 0.33 -0.31
41 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 0.63 0.31 -0.31
42 AT4G08780 Peroxidase superfamily protein 0.63 0.32 -0.31
43 AT3G53100 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.32 -0.33
44 AT1G21740 Protein of unknown function (DUF630 and DUF632) 0.63 0.32 -0.32
45 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 0.63 0.33 -0.32
46 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1		 -0.63 0.29 -0.31
47 AT5G49760 Leucine-rich repeat protein kinase family protein -0.63 0.32 -0.31
48 AT1G09280 CONTAINS InterPro DOMAIN/s: Rhodanese-like
(InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits
to 5912 proteins in 1592 species: Archae - 0; Bacteria -
2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses -
0; Other Eukaryotes - 2186 (source: NCBI BLink).		 0.62 0.33 -0.31
49 AT1G33790 jacalin lectin family protein 0.62 0.31 -0.3
50 AT5G19580 glyoxal oxidase-related protein -0.62 0.3 -0.31
51 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.33 -0.32
52 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein -0.62 0.3 -0.31
53 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.62 0.31 -0.31
54 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.61 0.32 -0.31
55 AT3G52540 ovate family protein 18 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 18, ovate family protein
18		 -0.61 0.29 -0.31
56 AT2G44740 cyclin p4;1 cyclin p4;1 -0.61 0.29 -0.32
57 AT4G08340 transposable element gene -0.61 0.32 -0.32
58 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.61 0.32 -0.32
59 AT3G57600 Integrase-type DNA-binding superfamily protein -0.61 0.32 -0.31
60 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein 0.61 0.32 -0.34
61 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.32 -0.29
62 AT5G03390 Protein of unknown function (DUF295) -0.6 0.33 -0.32
63 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 -0.6 0.33 -0.31
64 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.6 0.32 -0.31
65 AT1G31070 N-acetylglucosamine-1-phosphate uridylyltransferase 1 N-acetylglucosamine-1-phosphate
uridylyltransferase 1		 -0.6 0.29 -0.34
66 AT4G18550 alpha/beta-Hydrolases superfamily protein Arabidopsis thaliana DAD1-like
seeding establishment-related
lipase, DAD1-like seeding
establishment-related lipase		 0.6 0.33 -0.32
67 AT2G36590 proline transporter 3 PROLINE TRANSPORTER 3, proline
transporter 3		 -0.6 0.31 -0.34
68 AT3G54690 Sugar isomerase (SIS) family protein SETH3 -0.6 0.3 -0.31
69 AT1G21870 golgi nucleotide sugar transporter 5 golgi nucleotide sugar transporter
5		 -0.6 0.29 -0.28
70 AT4G27430 COP1-interacting protein 7 COP1-interacting protein 7 -0.6 0.35 -0.32
71 AT2G48100 Exonuclease family protein 0.6 0.3 -0.31
72 AT5G45540 Protein of unknown function (DUF594) -0.6 0.32 -0.29
73 AT4G13030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.32 -0.3
74 AT4G29610 Cytidine/deoxycytidylate deaminase family protein -0.6 0.29 -0.31
75 AT2G35740 nositol transporter 3 NOSITOL TRANSPORTER 3, nositol
transporter 3		 -0.6 0.33 -0.32
76 AT1G01380 Homeodomain-like superfamily protein ENHANCER OF TRY AND CPC 1 -0.59 0.32 -0.33
77 AT5G26330 Cupredoxin superfamily protein -0.59 0.33 -0.31
78 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 -0.59 0.32 -0.29
79 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.59 0.32 -0.31
80 AT1G48870 Transducin/WD40 repeat-like superfamily protein 0.59 0.3 -0.31
81 AT3G19553 Amino acid permease family protein -0.59 0.31 -0.32
82 AT5G65790 myb domain protein 68 MYB DOMAIN PROTEIN 68, myb domain
protein 68		 0.59 0.32 -0.32
83 AT2G46750 D-arabinono-1,4-lactone oxidase family protein 0.59 0.32 -0.31
84 AT3G21190 O-fucosyltransferase family protein -0.59 0.31 -0.32
85 AT3G06483 pyruvate dehydrogenase kinase ATPDHK, pyruvate dehydrogenase
kinase		 -0.59 0.31 -0.33
86 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.33 -0.32
87 AT5G13720 Uncharacterised protein family (UPF0114) -0.59 0.32 -0.29
88 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 0.58 0.29 -0.3
89 AT5G18240 myb-related protein 1 ARABIDOPSIS MYB-RELATED PROTEIN 1,
myb-related protein 1		 -0.58 0.31 -0.34
90 AT1G74940 Protein of unknown function (DUF581) -0.58 0.29 -0.33
91 AT4G29120 6-phosphogluconate dehydrogenase family protein -0.58 0.3 -0.32
92 AT1G26650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits
to 204 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.29 -0.31
93 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0.58 0.33 -0.31
94 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 0.58 0.34 -0.32
95 AT2G41770 Protein of unknown function (DUF288) -0.58 0.33 -0.32
96 AT1G67635 BEST Arabidopsis thaliana protein match is:
phosphatidylinositol 3- and 4-kinase family protein
(TAIR:AT1G27570.1); Has 50 Blast hits to 50 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.33
97 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 -0.57 0.31 -0.3
98 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.57 0.32 -0.29
99 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.3 -0.31
100 AT3G61840 Protein of unknown function (DUF688) -0.57 0.32 -0.31
101 AT4G28380 Leucine-rich repeat (LRR) family protein -0.57 0.31 -0.31
102 AT5G22870 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.57 0.31 -0.32
103 AT3G50130 Plant protein of unknown function (DUF247) -0.57 0.31 -0.34
104 AT2G47440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.3 -0.33
105 AT1G69600 zinc finger homeodomain 1 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 29, zinc finger
homeodomain 1, ZINC FINGER
HOMEODOMAIN 11		 0.57 0.31 -0.32
106 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.57 0.31 -0.31
107 AT3G03210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink).		 -0.57 0.32 -0.29
108 AT3G06120 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 MUTE -0.57 0.32 -0.3
109 AT3G06340 DNAJ heat shock N-terminal domain-containing protein 0.57 0.32 -0.32
110 AT2G42590 general regulatory factor 9 GF14 MU, general regulatory factor
9		 -0.57 0.31 -0.33
111 AT5G04460 RING/U-box superfamily protein 0.57 0.32 -0.34
112 AT1G69780 Homeobox-leucine zipper protein family ATHB13 -0.57 0.33 -0.3
113 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.56 0.33 -0.34
114 AT5G37210 Cysteine/Histidine-rich C1 domain family protein -0.56 0.32 -0.32
115 AT2G18780 F-box and associated interaction domains-containing protein 0.56 0.31 -0.29
116 AT1G22760 poly(A) binding protein 3 poly(A) binding protein 3 -0.56 0.31 -0.31
117 AT4G30860 SET domain group 4 ASH1-related 3, SET domain group 4 0.56 0.31 -0.34
118 AT2G07190 Domain of unknown function (DUF1985) -0.56 0.33 -0.32
119 AT1G50610 Leucine-rich repeat protein kinase family protein -0.56 0.3 -0.29
120 AT2G06090 Plant self-incompatibility protein S1 family -0.56 0.34 -0.34
121 AT4G02850 phenazine biosynthesis PhzC/PhzF family protein -0.56 0.3 -0.33
122 AT1G12520 copper chaperone for SOD1 copper chaperone for SOD1, copper
chaperone for SOD1		 0.56 0.3 -0.3
123 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 0.55 0.29 -0.32
124 AT1G19540 NmrA-like negative transcriptional regulator family protein 0.55 0.32 -0.32
125 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.55 0.34 -0.32
126 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 0.54 0.31 -0.31
127 AT2G31470 F-box and associated interaction domains-containing protein DROUGHT TOLERANCE REPRESSOR 0.54 0.31 -0.3
128 AT3G31340 transposable element gene 0.54 0.33 -0.31
129 AT5G52390 PAR1 protein 0.54 0.32 -0.31
130 AT3G25400 CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase
MazG-related, RS21-C6 (InterPro:IPR011394), EAR
(InterPro:IPR009039), NTP pyrophosphohydrolase MazG,
putative catalytic core (InterPro:IPR004518); Has 1123
Blast hits to 1121 proteins in 452 species: Archae - 22;
Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83;
Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).		 0.54 0.33 -0.32
131 AT4G31750 HOPW1-1-interacting 2 HOPW1-1-interacting 2 0.54 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0255 Trehalose α,α-D-Trehalose Trehalose trehalose degradation II (trehalase),
trehalose biosynthesis I 		-0.63 0.32 -0.3 C0255
133 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.56 0.33 -0.31
134 C0202 Phosphatidylglycerol-34:0 - Phosphatidylglycerol-34:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.56 0.34 -0.34