AGICode | AT2G35980 |
Description | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G35980 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
ARABIDOPSIS NDR1/HIN1-LIKE 10, NDR1/HIN1-LIKE, YELLOW-LEAF-SPECIFIC GENE 9 |
1 | 0.29 | -0.32 | ||
2 | AT4G30330 | Small nuclear ribonucleoprotein family protein | -0.78 | 0.3 | -0.32 | |||
3 | AT1G20340 | Cupredoxin superfamily protein | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112, PLASTOCYANIN 2 |
-0.77 | 0.34 | -0.31 | ||
4 | AT2G35780 | serine carboxypeptidase-like 26 | serine carboxypeptidase-like 26 | -0.76 | 0.32 | -0.32 | ||
5 | AT3G27060 | Ferritin/ribonucleotide reductase-like family protein | ATTSO2, TSO MEANING 'UGLY' IN CHINESE 2 |
-0.75 | 0.33 | -0.33 | ||
6 | AT5G45930 | magnesium chelatase i2 | CHL I2, CHLI-2, magnesium chelatase i2 |
-0.75 | 0.34 | -0.3 | ||
7 | AT2G18850 | SET domain-containing protein | -0.74 | 0.32 | -0.32 | |||
8 | AT5G01390 | DNAJ heat shock family protein | -0.74 | 0.31 | -0.3 | |||
9 | AT1G62690 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.32 | -0.32 | |||
10 | AT3G28460 | methyltransferases | -0.72 | 0.3 | -0.32 | |||
11 | AT1G01860 | Ribosomal RNA adenine dimethylase family protein | PALEFACE 1 | -0.72 | 0.31 | -0.3 | ||
12 | AT1G70560 | tryptophan aminotransferase of Arabidopsis 1 | cytokinin induced root curling 1, SHADE AVOIDANCE 3, tryptophan aminotransferase of Arabidopsis 1, WEAK ETHYLENE INSENSITIVE 8 |
-0.72 | 0.33 | -0.32 | ||
13 | AT4G27700 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.72 | 0.33 | -0.32 | |||
14 | AT5G14660 | peptide deformylase 1B | ATDEF2, DEF2, peptide deformylase 1B |
-0.72 | 0.32 | -0.32 | ||
15 | AT5G38520 | alpha/beta-Hydrolases superfamily protein | -0.72 | 0.31 | -0.31 | |||
16 | AT3G54210 | Ribosomal protein L17 family protein | -0.71 | 0.31 | -0.33 | |||
17 | AT4G27230 | histone H2A 2 | histone H2A 2 | -0.71 | 0.32 | -0.29 | ||
18 | AT1G20830 | multiple chloroplast division site 1 | MULTIPLE CHLOROPLAST DIVISION SITE 1 |
-0.71 | 0.33 | -0.31 | ||
19 | AT5G22880 | histone B2 | HISTONE H2B, histone B2 | -0.71 | 0.3 | -0.32 | ||
20 | AT5G27720 | Small nuclear ribonucleoprotein family protein | embryo defective 1644, SM-like protein 4 |
-0.7 | 0.3 | -0.31 | ||
21 | AT1G08550 | non-photochemical quenching 1 | ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1, non-photochemical quenching 1 |
-0.69 | 0.33 | -0.3 | ||
22 | AT2G33860 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related |
AUXIN RESPONSE TRANSCRIPTION FACTOR 3, ETTIN |
-0.69 | 0.32 | -0.3 | ||
23 | AT1G73655 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
-0.69 | 0.3 | -0.31 | |||
24 | AT2G43360 | Radical SAM superfamily protein | BIOTIN AUXOTROPH 2, BIOTIN AUXOTROPH B |
-0.68 | 0.3 | -0.31 | ||
25 | AT4G16410 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.68 | 0.32 | -0.31 | |||
26 | AT5G08580 | Calcium-binding EF hand family protein | -0.68 | 0.31 | -0.32 | |||
27 | AT2G26550 | heme oxygenase 2 | heme oxygenase 2 | -0.68 | 0.32 | -0.33 | ||
28 | AT5G16140 | Peptidyl-tRNA hydrolase family protein | -0.68 | 0.31 | -0.31 | |||
29 | AT1G21540 | AMP-dependent synthetase and ligase family protein | -0.67 | 0.31 | -0.33 | |||
30 | AT1G22700 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.67 | 0.32 | -0.3 | |||
31 | AT5G15790 | RING/U-box superfamily protein | -0.67 | 0.28 | -0.29 | |||
32 | AT1G62780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.67 | 0.31 | -0.31 | |||
33 | AT3G06660 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
-0.67 | 0.31 | -0.32 | |||
34 | AT2G07690 | Minichromosome maintenance (MCM2/3/5) family protein | MINICHROMOSOME MAINTENANCE 5 | -0.67 | 0.32 | -0.32 | ||
35 | AT2G30350 | Excinuclease ABC, C subunit, N-terminal | -0.67 | 0.31 | -0.29 | |||
36 | AT2G34500 | cytochrome P450, family 710, subfamily A, polypeptide 1 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
0.67 | 0.3 | -0.31 | ||
37 | AT3G02660 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | EMBRYO DEFECTIVE 2768 | -0.66 | 0.29 | -0.31 | ||
38 | AT5G42240 | serine carboxypeptidase-like 42 | serine carboxypeptidase-like 42 | -0.66 | 0.31 | -0.31 | ||
39 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
0.66 | 0.33 | -0.3 | ||
40 | AT5G60940 | Transducin/WD40 repeat-like superfamily protein | -0.65 | 0.31 | -0.32 | |||
41 | AT2G44150 | histone-lysine N-methyltransferase ASHH3 | histone-lysine N-methyltransferase ASHH3, SET DOMAIN-CONTAINING PROTEIN 7 |
-0.65 | 0.29 | -0.34 | ||
42 | AT5G50250 | chloroplast RNA-binding protein 31B | chloroplast RNA-binding protein 31B |
-0.65 | 0.34 | -0.33 | ||
43 | AT1G51580 | RNA-binding KH domain-containing protein | -0.65 | 0.33 | -0.32 | |||
44 | AT3G12780 | phosphoglycerate kinase 1 | phosphoglycerate kinase 1 | -0.65 | 0.3 | -0.29 | ||
45 | AT4G27520 | early nodulin-like protein 2 | AtENODL2, early nodulin-like protein 2 |
-0.65 | 0.3 | -0.3 | ||
46 | AT1G54410 | dehydrin family protein | -0.65 | 0.33 | -0.32 | |||
47 | AT3G05100 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.65 | 0.32 | -0.31 | |||
48 | AT5G59490 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.65 | 0.31 | -0.32 | |||
49 | AT2G21640 | Encodes a protein of unknown function that is a marker for oxidative stress response. |
0.64 | 0.3 | -0.28 | |||
50 | AT5G04120 | Phosphoglycerate mutase family protein | 0.64 | 0.3 | -0.31 | |||
51 | AT1G72175 | RING/U-box protein with domain of unknown function (DUF 1232) |
0.64 | 0.31 | -0.3 | |||
52 | AT4G00900 | ER-type Ca2+-ATPase 2 | ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ER-type Ca2+-ATPase 2 |
0.63 | 0.32 | -0.31 | ||
53 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.63 | 0.31 | -0.31 | |||
54 | AT5G44350 | ethylene-responsive nuclear protein -related | 0.62 | 0.3 | -0.34 | |||
55 | AT3G11900 | aromatic and neutral transporter 1 | aromatic and neutral transporter 1 | 0.61 | 0.32 | -0.34 | ||
56 | AT5G41860 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.3 | -0.3 | |||
57 | AT3G49160 | pyruvate kinase family protein | 0.6 | 0.32 | -0.31 | |||
58 | AT2G28650 | exocyst subunit exo70 family protein H8 | exocyst subunit exo70 family protein H8, exocyst subunit exo70 family protein H8 |
0.6 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
59 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
0.74 | 0.46 | -0.44 | ||
60 | C0174 | MST_2370.2 | - | - | - | 0.7 | 0.43 | -0.44 | ||
61 | C0166 | MST_1705.1 | - | - | - | -0.65 | 0.44 | -0.45 |