AT2G12880 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G12880
Description Zinc knuckle (CCHC-type) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G12880 Zinc knuckle (CCHC-type) family protein 1 0.31 -0.3
2 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.7 0.31 -0.32
3 AT5G37640 ubiquitin 9 ubiquitin 9 0.68 0.33 -0.3
4 AT3G02280 Flavodoxin family protein -0.68 0.34 -0.31
5 AT1G23070 Protein of unknown function (DUF300) 0.68 0.31 -0.3
6 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.67 0.31 -0.31
7 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.67 0.31 -0.31
8 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.67 0.32 -0.32
9 AT4G27220 NB-ARC domain-containing disease resistance protein -0.67 0.31 -0.32
10 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11		 -0.66 0.32 -0.32
11 AT5G15610 Proteasome component (PCI) domain protein -0.65 0.33 -0.31
12 AT1G69210 Uncharacterised protein family UPF0090 -0.65 0.34 -0.32
13 AT3G42290 transposable element gene 0.64 0.33 -0.32
14 AT5G57320 villin, putative villin 5 -0.64 0.32 -0.31
15 AT5G14850 Alg9-like mannosyltransferase family 0.64 0.34 -0.33
16 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.32 -0.31
17 AT1G36980 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0220
(InterPro:IPR007919); Has 424 Blast hits to 424 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi
- 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.63 0.3 -0.29
18 AT1G61400 S-locus lectin protein kinase family protein -0.63 0.33 -0.32
19 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.63 0.31 -0.34
20 AT1G20280 homeobox-leucine zipper protein-related -0.63 0.32 -0.32
21 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 0.63 0.3 -0.31
22 AT2G36210 SAUR-like auxin-responsive protein family -0.62 0.33 -0.3
23 AT2G13750 transposable element gene -0.62 0.31 -0.3
24 AT5G01470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.3 -0.31
25 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 0.62 0.32 -0.31
26 AT3G43590 zinc knuckle (CCHC-type) family protein -0.62 0.31 -0.32
27 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 -0.62 0.33 -0.32
28 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.62 0.34 -0.35
29 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.33 -0.31
30 AT2G25500 Inosine triphosphate pyrophosphatase family protein 0.61 0.29 -0.3
31 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 -0.61 0.33 -0.31
32 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.31
33 AT5G38670 Galactose oxidase/kelch repeat superfamily protein 0.61 0.3 -0.29
34 AT1G20410 Pseudouridine synthase family protein -0.61 0.33 -0.31
35 AT3G43320 transposable element gene 0.61 0.32 -0.3
36 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 0.61 0.31 -0.31
37 AT3G29640 transposable element gene 0.61 0.31 -0.31
38 AT3G13980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits
to 418 proteins in 98 species: Archae - 0; Bacteria - 6;
Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other
Eukaryotes - 1059 (source: NCBI BLink).		 0.6 0.32 -0.33
39 AT1G56380 Mitochondrial transcription termination factor family
protein		 -0.6 0.3 -0.32
40 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.31
41 AT1G66380 myb domain protein 114 myb domain protein 114, myb domain
protein 114		 0.59 0.31 -0.29
42 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.3 -0.33
43 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 0.59 0.31 -0.32
44 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.32 -0.31
45 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.3 -0.3
46 AT3G47440 tonoplast intrinsic protein 5;1 tonoplast intrinsic protein 5;1 0.59 0.29 -0.3
47 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 -0.59 0.32 -0.32
48 AT2G26350 peroxin 10 ATPEX10, peroxin 10 -0.58 0.32 -0.32
49 AT3G29690 HXXXD-type acyl-transferase family protein 0.58 0.33 -0.3
50 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 -0.58 0.31 -0.32
51 AT1G52020 transposable element gene -0.58 0.33 -0.33
52 AT1G78710 TRICHOME BIREFRINGENCE-LIKE 42 TRICHOME BIREFRINGENCE-LIKE 42 -0.58 0.31 -0.33
53 AT5G56880 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.3 -0.3
54 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 -0.58 0.32 -0.31
55 AT5G08360 Protein of unknown function (DUF789) -0.57 0.32 -0.3
56 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA -0.57 0.3 -0.32
57 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.57 0.32 -0.32
58 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.56 0.31 -0.33
59 AT4G30770 Putative membrane lipoprotein -0.56 0.3 -0.31
60 AT3G60570 expansin B5 expansin B5, ATHEXP BETA 1.3,
expansin B5		 -0.56 0.3 -0.33
61 AT1G49710 fucosyltransferase 12 ATFUT12, FUCT2, FUCTB,
fucosyltransferase 12		 0.56 0.31 -0.33
62 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.56 0.3 -0.32
63 AT3G13226 regulatory protein RecX family protein -0.56 0.31 -0.32
64 AT3G31340 transposable element gene -0.56 0.31 -0.3
65 AT5G61720 Protein of unknown function (DUF1216) 0.56 0.3 -0.31
66 AT5G62110 Homeodomain-like superfamily protein -0.56 0.31 -0.31
67 AT2G21740 Protein of unknown function (DUF1278) 0.56 0.33 -0.31
68 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 -0.56 0.32 -0.32
69 AT3G09430 unknown protein; Has 17 Blast hits to 17 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.31 -0.3
70 AT4G05140 Nucleoside transporter family protein 0.55 0.33 -0.31
71 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.55 0.34 -0.35
72 AT2G04820 transposable element gene -0.55 0.32 -0.33
73 AT1G66510 AAR2 protein family -0.55 0.34 -0.3
74 AT1G74350 Intron maturase, type II family protein -0.55 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0188 Nicotine (-)-Nicotine Nicotine - -0.72 0.45 -0.45 C0188
76 C0124 Isonicotinic acid - - - -0.63 0.45 -0.47