AT2G12870 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G12870
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G12870 transposable element gene 1 0.32 -0.34
2 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.31
3 AT2G07490 transposable element gene 0.62 0.31 -0.33
4 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.31 -0.3
5 AT1G74620 RING/U-box superfamily protein 0.59 0.3 -0.32
6 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.33
7 AT5G07720 Galactosyl transferase GMA12/MNN10 family protein 0.56 0.32 -0.31
8 AT4G28420 Tyrosine transaminase family protein 0.56 0.32 -0.31
9 AT5G43230 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.32 -0.31
10 AT5G46550 DNA-binding bromodomain-containing protein 0.56 0.33 -0.33
11 AT5G45880 Pollen Ole e 1 allergen and extensin family protein 0.56 0.3 -0.31
12 AT3G18220 Phosphatidic acid phosphatase (PAP2) family protein 0.55 0.3 -0.32
13 AT1G64560 pseudogene of S-adenosylmethionine-dependent
methyltransferase/rRNA
(adenine-N6,N6-)-dimethyltransferase/rRNA methyltransferase		 0.55 0.31 -0.33
14 AT1G44318 Aldolase superfamily protein hemb2 0.54 0.33 -0.3
15 AT1G34150 Pseudouridine synthase family protein -0.54 0.32 -0.32
16 AT3G28230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene
silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Something about silencing protein 10
(Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis
thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp)
family protein (TAIR:AT2G43650.1); Has 374 Blast hits to
360 proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other
Eukaryotes - 92 (source: NCBI BLink).		 0.54 0.3 -0.29
17 AT5G28760 transposable element gene 0.54 0.32 -0.32
18 AT3G24540 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 3, proline-rich
extensin-like receptor kinase 3		 0.53 0.33 -0.31
19 AT5G46850 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.31 -0.32
20 AT5G59370 actin 4 actin 4 0.53 0.32 -0.3
21 AT3G09550 Ankyrin repeat family protein 0.53 0.32 -0.32
22 AT5G60220 tetraspanin4 tetraspanin4 0.52 0.33 -0.3
23 AT5G01950 Leucine-rich repeat protein kinase family protein -0.52 0.32 -0.33
24 AT5G06650 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 2 0.52 0.3 -0.27
25 AT4G13000 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.52 0.31 -0.32
26 AT5G14870 cyclic nucleotide-gated channel 18 CYCLIC NUCLEOTIDE-GATED CHANNEL
18, cyclic nucleotide-gated
channel 18		 -0.52 0.33 -0.29
27 AT2G05500 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.29 -0.29
28 AT5G52500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57400.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.52 0.31 -0.31
29 AT1G53950 Ubiquitin-like superfamily protein -0.52 0.31 -0.33
30 AT4G01890 Pectin lyase-like superfamily protein 0.52 0.32 -0.29
31 AT5G11400 Protein kinase superfamily protein -0.51 0.34 -0.31
32 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.5 0.31 -0.36
33 AT4G31450 RING/U-box superfamily protein -0.5 0.32 -0.33
34 AT3G56390 BEST Arabidopsis thaliana protein match is: WRKY
DNA-binding protein 55 (TAIR:AT2G40740.2); Has 12 Blast
hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.32 -0.31
35 AT3G04100 AGAMOUS-like 57 AGAMOUS-like 57 -0.49 0.33 -0.32
36 AT1G53010 RING/U-box superfamily protein 0.49 0.33 -0.33
37 AT1G73050 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.49 0.31 -0.31
38 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 0.49 0.32 -0.32
39 AT1G63950 Heavy metal transport/detoxification superfamily protein -0.48 0.34 -0.33
40 AT3G42880 Leucine-rich repeat protein kinase family protein 0.48 0.28 -0.31
41 AT3G49630 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.48 0.32 -0.3
42 AT1G49530 geranylgeranyl pyrophosphate synthase 6 geranylgeranyl pyrophosphate
synthase 6		 -0.48 0.29 -0.3
43 AT5G24510 60S acidic ribosomal protein family -0.46 0.32 -0.3