AT2G42840 : protodermal factor 1
Query Information
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AGICode AT2G42840
Description protodermal factor 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42840 protodermal factor 1 protodermal factor 1 1 0.32 -0.3
2 AT5G16000 NSP-interacting kinase 1 NSP-interacting kinase 1 0.84 0.3 -0.31
3 AT5G16390 chloroplastic acetylcoenzyme A carboxylase 1 BIOTIN CARBOXYL CARRIER PROTEIN,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
chloroplastic acetylcoenzyme A
carboxylase 1, CAC1-A, CAC1A		 0.83 0.3 -0.31
4 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 0.83 0.3 -0.31
5 AT3G56370 Leucine-rich repeat protein kinase family protein 0.82 0.31 -0.31
6 AT3G05470 Actin-binding FH2 (formin homology 2) family protein 0.81 0.31 -0.3
7 AT1G11600 cytochrome P450, family 77, subfamily B, polypeptide 1 cytochrome P450, family 77,
subfamily B, polypeptide 1		 0.81 0.3 -0.31
8 AT4G04890 protodermal factor 2 protodermal factor 2 0.8 0.33 -0.32
9 AT3G51290 Protein of unknown function (DUF630) ;Protein of unknown
function (DUF632)		 0.8 0.3 -0.32
10 AT2G45190 Plant-specific transcription factor YABBY family protein ABNORMAL FLORAL ORGANS,
FILAMENTOUS FLOWER, YABBY1		 0.8 0.32 -0.32
11 AT1G72970 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 embryo sac development arrest 17,
HOTHEAD		 0.8 0.31 -0.32
12 AT3G20820 Leucine-rich repeat (LRR) family protein 0.8 0.32 -0.31
13 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.79 0.3 -0.3
14 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.31 -0.31
15 AT5G23940 HXXXD-type acyl-transferase family protein DEFECTIVE IN CUTICULAR RIDGES,
EMBRYO DEFECTIVE 3009, PERMEABLE
LEAVES3		 0.79 0.33 -0.33
16 AT5G55540 tornado 1 LOPPED 1, TORNADO 1 0.78 0.33 -0.31
17 AT3G26590 MATE efflux family protein -0.78 0.33 -0.31
18 AT1G77630 Peptidoglycan-binding LysM domain-containing protein lysin-motif (LysM) domain protein
3		 0.78 0.31 -0.3
19 AT1G67040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.31 -0.32
20 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 0.77 0.32 -0.3
21 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 0.77 0.33 -0.29
22 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 -0.77 0.33 -0.31
23 AT1G08315 ARM repeat superfamily protein -0.77 0.32 -0.34
24 AT2G37630 myb-like HTH transcriptional regulator family protein ASYMMETRIC LEAVES 1, MYB DOMAIN
PROTEIN 91, ARABIDOPSIS
PHANTASTICA-LIKE 1, MYB DOMAIN
PROTEIN 91		 0.77 0.32 -0.3
25 AT2G05990 NAD(P)-binding Rossmann-fold superfamily protein ENOYL-ACP REDUCTASE 1, MOSAIC
DEATH 1		 0.77 0.32 -0.32
26 AT3G61670 Protein of unknown function (DUF3133) 0.77 0.34 -0.3
27 AT2G45970 cytochrome P450, family 86, subfamily A, polypeptide 8 cytochrome P450, family 86,
subfamily A, polypeptide 8,
LACERATA		 0.76 0.31 -0.31
28 AT3G25670 Leucine-rich repeat (LRR) family protein 0.76 0.31 -0.33
29 AT1G78430 ROP interactive partner 2 ROP interactive partner 2 0.76 0.3 -0.31
30 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain 0.76 0.3 -0.3
31 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.76 0.31 -0.31
32 AT4G25900 Galactose mutarotase-like superfamily protein -0.75 0.33 -0.31
33 AT5G25590 Protein of unknown function (DUF630 and DUF632) 0.75 0.32 -0.33
34 AT3G15030 TCP family transcription factor 4 maternal effect embryo arrest 35,
TCP family transcription factor 4		 0.75 0.32 -0.31
35 AT1G49430 long-chain acyl-CoA synthetase 2 long-chain acyl-CoA synthetase 2,
LATERAL ROOT DEVELOPMENT 2		 0.75 0.31 -0.3
36 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.33 -0.31
37 AT2G41540 6-phosphogluconate dehydrogenase family protein GPDHC1 0.75 0.33 -0.32
38 AT4G04340 ERD (early-responsive to dehydration stress) family protein 0.75 0.3 -0.3
39 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 0.74 0.33 -0.31
40 AT4G29030 Putative membrane lipoprotein 0.74 0.32 -0.32
41 AT1G56720 Protein kinase superfamily protein 0.74 0.32 -0.32
42 AT1G02220 NAC domain containing protein 3 NAC domain containing protein 3,
NAC domain containing protein 3		 -0.74 0.34 -0.34
43 AT2G05790 O-Glycosyl hydrolases family 17 protein 0.74 0.34 -0.36
44 AT3G13510 Protein of Unknown Function (DUF239) 0.74 0.33 -0.3
45 AT2G02540 homeobox protein 21 homeobox protein 21, homeobox
protein 21, ZINC FINGER
HOMEODOMAIN 4, ZINC FINGER
HOMEODOMAIN 3		 0.74 0.31 -0.31
46 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.31 -0.3
47 AT4G23940 FtsH extracellular protease family 0.73 0.32 -0.28
48 AT3G52920 Family of unknown function (DUF662) 0.73 0.35 -0.33
49 AT5G01075 Glycosyl hydrolase family 35 protein 0.73 0.33 -0.33
50 AT3G59420 crinkly4 crinkly4, crinkly4 0.73 0.33 -0.32
51 AT3G06220 AP2/B3-like transcriptional factor family protein 0.73 0.32 -0.32
52 AT4G05190 kinesin 5 kinesin 5 0.73 0.32 -0.31
53 AT2G28470 beta-galactosidase 8 beta-galactosidase 8 0.73 0.31 -0.31
54 AT5G63680 Pyruvate kinase family protein -0.73 0.32 -0.31
55 AT3G57830 Leucine-rich repeat protein kinase family protein 0.73 0.33 -0.33
56 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.72 0.31 -0.31
57 AT4G29020 glycine-rich protein 0.72 0.33 -0.32
58 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 0.72 0.32 -0.32
59 AT3G63120 cyclin p1;1 cyclin p1;1 0.72 0.32 -0.32
60 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.72 0.32 -0.32
61 AT3G22520 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast, chloroplast
envelope; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14840.1); Has 717 Blast
hits to 703 proteins in 179 species: Archae - 14; Bacteria
- 134; Metazoa - 141; Fungi - 74; Plants - 209; Viruses -
0; Other Eukaryotes - 145 (source: NCBI BLink).		 0.72 0.31 -0.32
62 AT1G68400 leucine-rich repeat transmembrane protein kinase family
protein		 0.72 0.34 -0.32
63 AT5G52510 SCARECROW-like 8 SCARECROW-like 8 -0.72 0.32 -0.32
64 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.72 0.3 -0.32
65 AT4G14770 TESMIN/TSO1-like CXC 2 TESMIN/TSO1-LIKE CXC 2,
TESMIN/TSO1-like CXC 2		 0.72 0.3 -0.31
66 AT3G63300 FORKED 1 FORKED 1 0.72 0.31 -0.34
67 AT3G58710 WRKY DNA-binding protein 69 RABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 69, WRKY
DNA-binding protein 69		 -0.71 0.29 -0.29
68 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 -0.71 0.32 -0.31
69 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.71 0.29 -0.31
70 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 -0.71 0.31 -0.32
71 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 0.71 0.3 -0.34
72 AT2G27310 F-box family protein -0.71 0.32 -0.33
73 AT3G56950 small and basic intrinsic protein 2;1 SMALL AND BASIC INTRINSIC PROTEIN
2, small and basic intrinsic
protein 2;1		 -0.71 0.29 -0.32
74 AT1G15180 MATE efflux family protein 0.71 0.31 -0.34
75 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.71 0.3 -0.33
76 AT2G31270 homolog of yeast CDT1 A ARABIDOPSIS HOMOLOG OF YEAST CDT1
A, ARABIDOPSIS HOMOLOG OF YEAST
CDT1, homolog of yeast CDT1 A		 0.71 0.32 -0.32
77 AT5G36220 cytochrome p450 81d1 cytochrome P450, family 81,
subfamily D, polypeptide 1,
CYTOCHROME P450 91A1		 -0.7 0.32 -0.32
78 AT1G21900 emp24/gp25L/p24 family/GOLD family protein -0.69 0.31 -0.31
79 AT2G47690 NADH-ubiquinone oxidoreductase-related -0.69 0.32 -0.31
80 AT1G11020 RING/FYVE/PHD zinc finger superfamily protein -0.69 0.3 -0.32
81 AT3G25780 allene oxide cyclase 3 allene oxide cyclase 3 -0.69 0.3 -0.31
82 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.3 -0.32
83 AT3G20920 translocation protein-related -0.68 0.31 -0.33
84 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 -0.68 0.31 -0.32
85 AT5G54170 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.31
86 AT4G23100 glutamate-cysteine ligase ATECS1, CADMIUM SENSITIVE 2,
glutamate-cysteine ligase, GSHA,
PHYTOALEXIN DEFICIENT 2, ROOT
MERISTEMLESS 1		 -0.68 0.32 -0.32
87 AT2G47380 Cytochrome c oxidase subunit Vc family protein -0.68 0.32 -0.31
88 AT4G21610 lsd one like 2 lsd one like 2 -0.68 0.33 -0.31
89 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.68 0.32 -0.31
90 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.68 0.33 -0.3
91 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 -0.67 0.33 -0.31
92 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.67 0.31 -0.31
93 AT4G30500 Protein of unknown function (DUF788) -0.67 0.31 -0.31
94 AT3G58180 ARM repeat superfamily protein -0.67 0.32 -0.33
95 AT4G36860 LIM domain-containing protein DA1-RELATED PROTEIN 1 -0.67 0.33 -0.3
96 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.67 0.3 -0.3
97 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 -0.66 0.32 -0.33
98 AT1G65520 delta(3), delta(2)-enoyl CoA isomerase 1 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 1,
ENOYL-COA HYDRATASE/ISOMERASE C,
delta(3), delta(2)-enoyl CoA
isomerase 1, PEC11		 -0.66 0.33 -0.32
99 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.66 0.32 -0.32
100 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11		 -0.66 0.31 -0.31
101 AT2G31305 inhibitor-3 INHIBITOR-3 -0.66 0.33 -0.32
102 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.32 -0.31
103 AT1G52880 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 18, ATNAM, NO APICAL
MERISTEM, NAC-REGULATED SEED
MORPHOLOGY 2		 -0.66 0.33 -0.31
104 AT3G16500 phytochrome-associated protein 1 indole-3-acetic acid inducible 26,
phytochrome-associated protein 1		 -0.66 0.33 -0.33
105 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 -0.65 0.33 -0.3
106 AT5G44290 Protein kinase superfamily protein -0.65 0.29 -0.31
107 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.65 0.33 -0.31
108 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB -0.65 0.31 -0.32
109 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 -0.65 0.34 -0.3
110 AT4G26310 elongation factor P (EF-P) family protein -0.65 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.84 0.45 -0.44 C0007
112 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.72 0.41 -0.47