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| AGICode | AT2G42780 |
| Description | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
Gene information
| Gene Code | Description / Information | Gene name | Correlation | link | ||||
|---|---|---|---|---|---|---|---|---|
| pcc | 2.5% | 97.5% | PPI | |||||
| 1 | AT2G42780 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
1 | 0.29 | -0.33 |
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| 2 | AT3G61690 | nucleotidyltransferases | -0.58 | 0.32 | -0.33 |
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| 3 | AT5G14330 | unknown protein; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.3 |
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| 4 | AT3G14350 | STRUBBELIG-receptor family 7 | STRUBBELIG-receptor family 7 | -0.58 | 0.32 | -0.3 |
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| 5 | AT5G14230 | CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). |
-0.57 | 0.3 | -0.31 |
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| 6 | AT4G28830 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.56 | 0.31 | -0.33 |
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| 7 | AT3G05130 | BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink). |
-0.55 | 0.32 | -0.29 |
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| 8 | AT5G03770 | KDO transferase A | AtKdtA, KDO transferase A | 0.55 | 0.31 | -0.32 |
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| 9 | AT3G45120 | transposable element gene | 0.53 | 0.34 | -0.33 |
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| 10 | AT1G80020 | transposable element gene | -0.53 | 0.32 | -0.3 |
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| 11 | AT1G79860 | RHO guanyl-nucleotide exchange factor 12 | ATROPGEF12, MATERNAL EFFECT EMBRYO ARREST 64, RHO guanyl-nucleotide exchange factor 12 |
-0.51 | 0.31 | -0.34 |
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| 12 | AT1G15300 | transposable element gene | 0.51 | 0.34 | -0.31 |
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| 13 | AT1G71290 | F-box associated ubiquitination effector family protein | -0.5 | 0.31 | -0.31 |
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| 14 | AT3G42360 | transposable element gene | -0.5 | 0.33 | -0.31 |
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| 15 | AT1G01340 | cyclic nucleotide gated channel 10 | ACBK1, cyclic nucleotide gated channel 10, cyclic nucleotide gated channel 10 |
-0.49 | 0.32 | -0.32 |
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| 16 | AT3G50550 | unknown protein; Has 75703 Blast hits to 19796 proteins in 1115 species: Archae - 327; Bacteria - 34383; Metazoa - 14453; Fungi - 7466; Plants - 2586; Viruses - 958; Other Eukaryotes - 15530 (source: NCBI BLink). |
0.49 | 0.32 | -0.29 |
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