AGICode | AT2G22475 |
Description | GRAM domain family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G22475 | GRAM domain family protein | GL2-EXPRESSION MODULATOR | 1 | 0.33 | -0.3 | ||
2 | AT5G14250 | Proteasome component (PCI) domain protein | CONSTITUTIVE PHOTOMORPHOGENIC 13, COP9 SIGNALOSOME SUBUNIT 3, FUSCA 11 |
0.84 | 0.33 | -0.34 | ||
3 | AT1G22450 | cytochrome C oxidase 6B | CYTOCHROME C OXIDASE 6B2, cytochrome C oxidase 6B |
0.83 | 0.32 | -0.35 | ||
4 | AT5G14030 | translocon-associated protein beta (TRAPB) family protein | 0.83 | 0.29 | -0.32 | |||
5 | AT5G54900 | RNA-binding protein 45A | RNA-binding protein 45A, RNA-binding protein 45A |
0.83 | 0.31 | -0.31 | ||
6 | AT2G36310 | uridine-ribohydrolase 1 | nucleoside hydrolase 1, uridine-ribohydrolase 1 |
0.83 | 0.32 | -0.31 | ||
7 | AT1G73250 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 | ACTIVATING TRANSCRIPTION FACTOR 5, GDP-4-keto-6-deoxymannose-3,5-epim erase-4-reductase 1 |
0.82 | 0.31 | -0.33 | ||
8 | AT2G33845 | Nucleic acid-binding, OB-fold-like protein | 0.82 | 0.31 | -0.31 | |||
9 | AT1G27390 | translocase outer membrane 20-2 | translocase outer membrane 20-2 | 0.81 | 0.3 | -0.33 | ||
10 | AT2G30050 | transducin family protein / WD-40 repeat family protein | 0.81 | 0.32 | -0.33 | |||
11 | AT3G14290 | 20S proteasome alpha subunit E2 | 20S proteasome alpha subunit E2 | 0.81 | 0.31 | -0.33 | ||
12 | AT5G55940 | Uncharacterised protein family (UPF0172) | embryo defective 2731 | 0.8 | 0.32 | -0.31 | ||
13 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.3 | -0.32 | |||
14 | AT4G36420 | Ribosomal protein L12 family protein | 0.79 | 0.3 | -0.31 | |||
15 | AT5G08160 | serine/threonine protein kinase 3 | serine/threonine protein kinase 3, serine/threonine protein kinase 3 |
0.79 | 0.32 | -0.33 | ||
16 | AT1G02360 | Chitinase family protein | 0.79 | 0.3 | -0.33 | |||
17 | AT5G63400 | adenylate kinase 1 | adenylate kinase 1 | 0.79 | 0.32 | -0.32 | ||
18 | AT4G30010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.31 | -0.3 | |||
19 | AT3G07680 | emp24/gp25L/p24 family/GOLD family protein | 0.78 | 0.31 | -0.32 | |||
20 | ATCG00560 | photosystem II reaction center protein L | photosystem II reaction center protein L |
-0.78 | 0.33 | -0.31 | ||
21 | AT5G55610 | unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.78 | 0.31 | -0.31 | |||
22 | AT5G07960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
0.78 | 0.32 | -0.33 | |||
23 | AT1G09330 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). |
0.78 | 0.32 | -0.31 | |||
24 | AT1G29990 | prefoldin 6 | prefoldin 6 | 0.77 | 0.33 | -0.3 | ||
25 | AT2G18440 | GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA | GENE WITH UNSTABLE TRANSCRIPT 15 | -0.77 | 0.31 | -0.29 | ||
26 | AT1G19360 | Nucleotide-diphospho-sugar transferase family protein | reduced residual arabinose 3 | 0.77 | 0.31 | -0.32 | ||
27 | AT3G55730 | myb domain protein 109 | myb domain protein 109, myb domain protein 109 |
0.77 | 0.32 | -0.33 | ||
28 | AT4G29390 | Ribosomal protein S30 family protein | 0.77 | 0.32 | -0.3 | |||
29 | AT4G00300 | fringe-related protein | 0.77 | 0.33 | -0.3 | |||
30 | AT4G26210 | Mitochondrial ATP synthase subunit G protein | 0.77 | 0.34 | -0.3 | |||
31 | AT4G39820 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.77 | 0.32 | -0.31 | |||
32 | AT1G26630 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein |
EUKARYOTIC ELONGATION FACTOR 5A-2, EUKARYOTIC ELONGATION FACTOR 5A-2, FUMONISIN B1-RESISTANT12 |
0.77 | 0.3 | -0.34 | ||
33 | AT1G17890 | NAD(P)-binding Rossmann-fold superfamily protein | GER2 | 0.77 | 0.3 | -0.32 | ||
34 | AT1G77750 | Ribosomal protein S13/S18 family | 0.77 | 0.31 | -0.33 | |||
35 | AT5G50960 | nucleotide binding protein 35 | NUCLEOTIDE BINDING PROTEIN 35, nucleotide binding protein 35 |
0.77 | 0.31 | -0.34 | ||
36 | AT1G56230 | Protein of unknown function (DUF1399) | -0.76 | 0.3 | -0.31 | |||
37 | AT4G31130 | Protein of unknown function (DUF1218) | 0.76 | 0.31 | -0.33 | |||
38 | AT5G58030 | Transport protein particle (TRAPP) component | 0.76 | 0.31 | -0.31 | |||
39 | AT4G29830 | Transducin/WD40 repeat-like superfamily protein | vernalization independence 3 | 0.75 | 0.32 | -0.32 | ||
40 | AT5G55390 | ENHANCED DOWNY MILDEW 2 | ENHANCED DOWNY MILDEW 2 | -0.75 | 0.31 | -0.32 | ||
41 | AT5G59880 | actin depolymerizing factor 3 | actin depolymerizing factor 3 | 0.75 | 0.34 | -0.31 | ||
42 | AT1G14830 | DYNAMIN-like 1C | DYNAMIN-like 1C, ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5, DYNAMIN-like 1C, DYNAMIN RELATED PROTEIN 1C |
0.75 | 0.31 | -0.33 | ||
43 | AT1G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.75 | 0.34 | -0.33 | |||
44 | AT3G19760 | eukaryotic initiation factor 4A-III | eukaryotic initiation factor 4A-III |
0.75 | 0.32 | -0.32 | ||
45 | AT1G63000 | nucleotide-rhamnose synthase/epimerase-reductase | nucleotide-rhamnose synthase/epimerase-reductase, UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E PIMERASE-4-REDUCTASE 1 |
0.75 | 0.32 | -0.31 | ||
46 | AT1G26340 | cytochrome B5 isoform A | ARABIDOPSIS CYTOCHROME B5 ISOFORM A, B5 #6, cytochrome B5 isoform A |
0.75 | 0.28 | -0.32 | ||
47 | AT4G01100 | adenine nucleotide transporter 1 | adenine nucleotide transporter 1 | 0.75 | 0.32 | -0.32 | ||
48 | AT5G13690 | alpha-N-acetylglucosaminidase family / NAGLU family | CYCLOPS 1, N-ACETYL-GLUCOSAMINIDASE |
-0.75 | 0.33 | -0.29 | ||
49 | AT2G19760 | profilin 1 | PROFILIN 1, profilin 1 | 0.75 | 0.3 | -0.34 | ||
50 | AT5G65270 | RAB GTPase homolog A4A | RAB GTPase homolog A4A, RAB GTPase homolog A4A |
0.75 | 0.32 | -0.32 | ||
51 | AT2G30060 | Pleckstrin homology (PH) domain superfamily protein | 0.75 | 0.33 | -0.32 | |||
52 | AT1G71940 | SNARE associated Golgi protein family | 0.75 | 0.32 | -0.31 | |||
53 | AT1G48090 | calcium-dependent lipid-binding family protein | -0.75 | 0.33 | -0.31 | |||
54 | AT3G04830 | Protein prenylyltransferase superfamily protein | 0.74 | 0.31 | -0.3 | |||
55 | AT5G07110 | prenylated RAB acceptor 1.B6 | prenylated RAB acceptor 1.B6 | 0.74 | 0.34 | -0.27 | ||
56 | AT1G77800 | PHD finger family protein | -0.74 | 0.33 | -0.32 | |||
57 | AT1G53530 | Peptidase S24/S26A/S26B/S26C family protein | 0.74 | 0.33 | -0.31 | |||
58 | AT3G18940 | clast3-related | 0.74 | 0.32 | -0.31 | |||
59 | AT1G03150 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.74 | 0.32 | -0.35 | |||
60 | AT3G47980 | Integral membrane HPP family protein | 0.74 | 0.33 | -0.31 | |||
61 | ATCG00080 | photosystem II reaction center protein I | photosystem II reaction center protein I |
-0.74 | 0.33 | -0.3 | ||
62 | AT3G22110 | 20S proteasome alpha subunit C1 | 20S proteasome alpha subunit C1 | 0.74 | 0.32 | -0.32 | ||
63 | AT4G32620 | Enhancer of polycomb-like transcription factor protein | -0.74 | 0.3 | -0.32 | |||
64 | AT2G21160 | Translocon-associated protein (TRAP), alpha subunit | 0.74 | 0.31 | -0.31 | |||
65 | AT5G14105 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.74 | 0.33 | -0.32 | |||
66 | AT3G61140 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain |
ARABIDOPSIS THALIANA FUSCA 6, SHAGGY-LIKE KINASE 31, CONSTITUTIVE PHOTOMORPHOGENIC 11, COP9 SIGNALOSOME SUBUNIT 1, EMBRYO DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE KINASE 31 |
0.74 | 0.31 | -0.32 | ||
67 | AT1G30630 | Coatomer epsilon subunit | 0.73 | 0.3 | -0.31 | |||
68 | AT1G65650 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | UCH2 | 0.73 | 0.33 | -0.3 | ||
69 | ATCG00770 | ribosomal protein S8 | ribosomal protein S8 | -0.73 | 0.31 | -0.32 | ||
70 | AT3G05150 | Major facilitator superfamily protein | 0.73 | 0.3 | -0.32 | |||
71 | AT4G14800 | 20S proteasome beta subunit D2 | 20S proteasome beta subunit D2 | 0.73 | 0.34 | -0.32 | ||
72 | AT3G48140 | B12D protein | 0.73 | 0.3 | -0.31 | |||
73 | AT3G59920 | RAB GDP dissociation inhibitor 2 | RAB GDP dissociation inhibitor 2, RAB GDP dissociation inhibitor 2 |
0.73 | 0.3 | -0.29 | ||
74 | AT5G02270 | non-intrinsic ABC protein 9 | ATP-binding cassette I20, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 9, non-intrinsic ABC protein 9 |
0.73 | 0.31 | -0.32 | ||
75 | AT5G20840 | Phosphoinositide phosphatase family protein | -0.73 | 0.29 | -0.31 | |||
76 | AT1G08220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). |
0.73 | 0.34 | -0.31 | |||
77 | AT5G44110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATP-binding cassette A21, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 |
0.73 | 0.31 | -0.33 | ||
78 | AT2G21870 | copper ion binding;cobalt ion binding;zinc ion binding | MALE GAMETOPHYTE DEFECTIVE 1 | 0.73 | 0.32 | -0.31 | ||
79 | AT5G14790 | ARM repeat superfamily protein | 0.73 | 0.32 | -0.32 | |||
80 | AT3G57570 | ARM repeat superfamily protein | -0.72 | 0.33 | -0.3 | |||
81 | AT3G04780 | Protein of unknown function (DUF1000) | 0.72 | 0.32 | -0.33 | |||
82 | AT2G19900 | NADP-malic enzyme 1 | Arabidopsis thaliana NADP-malic enzyme 1, NADP-malic enzyme 1 |
-0.72 | 0.31 | -0.3 | ||
83 | AT1G72650 | TRF-like 6 | TRF-like 6 | -0.72 | 0.31 | -0.33 | ||
84 | AT1G73940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.3 | -0.32 | |||
85 | AT2G43600 | Chitinase family protein | 0.72 | 0.3 | -0.3 | |||
86 | AT1G22200 | Endoplasmic reticulum vesicle transporter protein | 0.72 | 0.32 | -0.32 | |||
87 | AT5G19050 | alpha/beta-Hydrolases superfamily protein | 0.72 | 0.29 | -0.34 | |||
88 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
0.72 | 0.32 | -0.32 | ||
89 | AT3G17780 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.34 | |||
90 | ATCG00550 | photosystem II reaction center protein J | photosystem II reaction center protein J |
-0.72 | 0.3 | -0.33 | ||
91 | AT2G03510 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
0.72 | 0.32 | -0.31 | |||
92 | AT1G12000 | Phosphofructokinase family protein | 0.72 | 0.31 | -0.3 | |||
93 | AT1G05270 | TraB family protein | 0.72 | 0.29 | -0.29 | |||
94 | AT5G62290 | nucleotide-sensitive chloride conductance regulator (ICln) family protein |
0.72 | 0.31 | -0.3 | |||
95 | AT1G16710 | histone acetyltransferase of the CBP family 12 | histone acetyltransferase of the CBP family 12 |
-0.71 | 0.33 | -0.32 | ||
96 | AT5G25560 | CHY-type/CTCHY-type/RING-type Zinc finger protein | -0.7 | 0.31 | -0.32 | |||
97 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | -0.7 | 0.34 | -0.28 | ||
98 | AT5G07050 | nodulin MtN21 /EamA-like transporter family protein | -0.7 | 0.31 | -0.32 | |||
99 | AT1G26580 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.7 | 0.34 | -0.32 | |||
100 | AT1G58250 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain |
SABRE | -0.7 | 0.31 | -0.31 | ||
101 | AT4G34040 | RING/U-box superfamily protein | -0.7 | 0.31 | -0.33 | |||
102 | AT5G52460 | FBD, F-box and Leucine Rich Repeat domains containing protein |
embryo sac development arrest 41 | -0.7 | 0.31 | -0.33 | ||
103 | AT3G13040 | myb-like HTH transcriptional regulator family protein | -0.7 | 0.31 | -0.32 | |||
104 | AT5G58160 | actin binding | -0.7 | 0.3 | -0.3 | |||
105 | AT1G54160 | nuclear factor Y, subunit A5 | nuclear factor Y, subunit A5, NUCLEAR FACTOR Y A5 |
-0.7 | 0.33 | -0.29 | ||
106 | AT2G45620 | Nucleotidyltransferase family protein | -0.69 | 0.34 | -0.3 | |||
107 | AT5G57390 | AINTEGUMENTA-like 5 | AINTEGUMENTA-like 5, CHOTTO 1, EMBRYOMAKER, PLETHORA 5 |
-0.69 | 0.3 | -0.32 | ||
108 | AT5G62490 | HVA22 homologue B | ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22 homologue B |
-0.68 | 0.33 | -0.28 | ||
109 | ATCG01100 | NADH dehydrogenase family protein | NDHA | -0.68 | 0.32 | -0.3 | ||
110 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.68 | 0.31 | -0.32 | ||
111 | AT1G74160 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). |
-0.68 | 0.33 | -0.28 | |||
112 | AT3G22380 | time for coffee | TIME FOR COFFEE | -0.68 | 0.32 | -0.34 | ||
113 | AT4G36980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). |
-0.68 | 0.31 | -0.31 | |||
114 | AT5G52230 | methyl-CPG-binding domain protein 13 | methyl-CPG-binding domain protein 13 |
-0.68 | 0.3 | -0.31 | ||
115 | AT3G50380 | Protein of unknown function (DUF1162) | -0.67 | 0.33 | -0.33 | |||
116 | AT4G04740 | calcium-dependent protein kinase 23 | ATCPK23, calcium-dependent protein kinase 23 |
-0.67 | 0.32 | -0.32 | ||
117 | AT2G30790 | photosystem II subunit P-2 | photosystem II subunit P-2 | -0.67 | 0.3 | -0.3 | ||
118 | AT2G21820 | unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
119 | AT2G39580 | CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
-0.67 | 0.3 | -0.28 | |||
120 | AT5G08210 | MIR834a; miRNA | microRNA834A | -0.67 | 0.31 | -0.3 | ||
121 | ATCG00340 | Photosystem I, PsaA/PsaB protein | PSAB | -0.67 | 0.31 | -0.34 | ||
122 | AT3G26350 | LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). |
-0.67 | 0.34 | -0.3 | |||
123 | AT2G15810 | transposable element gene | -0.66 | 0.32 | -0.31 | |||
124 | AT5G03650 | starch branching enzyme 2.2 | starch branching enzyme 2.2 | -0.66 | 0.34 | -0.35 | ||
125 | AT3G48190 | ataxia-telangiectasia mutated | ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated, pcd in male gametogenesis 1 |
-0.66 | 0.32 | -0.3 | ||
126 | AT3G08850 | HEAT repeat ;WD domain, G-beta repeat protein protein | ATRAPTOR1B, RAPTOR1, RAPTOR1B | -0.66 | 0.32 | -0.32 | ||
127 | AT2G17975 | zinc finger (Ran-binding) family protein | -0.65 | 0.32 | -0.32 | |||
128 | AT2G43500 | Plant regulator RWP-RK family protein | -0.65 | 0.34 | -0.34 | |||
129 | AT2G38905 | Low temperature and salt responsive protein family | -0.65 | 0.32 | -0.32 | |||
130 | AT2G28490 | RmlC-like cupins superfamily protein | -0.65 | 0.31 | -0.32 | |||
131 | ATCG00780 | ribosomal protein L14 | ribosomal protein L14 | -0.65 | 0.33 | -0.31 | ||
132 | AT4G18600 | SCAR family protein | WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 5, SCARL, WAVE5 |
-0.65 | 0.32 | -0.31 | ||
133 | AT4G03205 | Coproporphyrinogen III oxidase | hemf2 | -0.65 | 0.33 | -0.32 | ||
134 | ATCG00540 | photosynthetic electron transfer A | photosynthetic electron transfer A | -0.65 | 0.32 | -0.31 | ||
135 | AT5G07890 | myosin heavy chain-related | -0.65 | 0.33 | -0.32 | |||
136 | AT2G43800 | Actin-binding FH2 (formin homology 2) family protein | -0.65 | 0.3 | -0.31 | |||
137 | AT2G03140 | alpha/beta-Hydrolases superfamily protein | -0.64 | 0.32 | -0.31 | |||
138 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
-0.64 | 0.29 | -0.32 | ||
139 | AT1G09550 | Pectinacetylesterase family protein | -0.64 | 0.33 | -0.31 | |||
140 | AT5G15540 | PHD finger family protein | ARABIDOPSIS THALIANA SISTER-CHROMATID COHESION 2, EMBRYO DEFECTIVE 2773, SISTER-CHROMATID COHESION 2 |
-0.64 | 0.31 | -0.3 | ||
141 | AT3G02500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.3 | -0.35 | |||
142 | ATCG00760 | ribosomal protein L36 | ribosomal protein L36 | -0.64 | 0.3 | -0.32 | ||
143 | AT1G17870 | ethylene-dependent gravitropism-deficient and yellow-green-like 3 |
ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3, ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 |
-0.64 | 0.32 | -0.31 | ||
144 | AT4G33210 | F-box family protein | SLOW MOTION | -0.64 | 0.32 | -0.32 | ||
145 | AT2G25890 | Oleosin family protein | -0.64 | 0.28 | -0.31 | |||
146 | AT3G59100 | glucan synthase-like 11 | glucan synthase-like 11, gsl11, glucan synthase-like 11 |
-0.64 | 0.32 | -0.31 | ||
147 | AT1G11720 | starch synthase 3 | starch synthase 3, starch synthase 3 |
-0.64 | 0.3 | -0.33 | ||
148 | AT4G14760 | kinase interacting (KIP1-like) family protein | -0.64 | 0.3 | -0.31 | |||
149 | AT3G17290 | transposable element gene | -0.63 | 0.32 | -0.31 | |||
150 | AT3G05030 | sodium hydrogen exchanger 2 | ATNHX2, sodium hydrogen exchanger 2 |
-0.63 | 0.32 | -0.33 | ||
151 | AT1G63700 | Protein kinase superfamily protein | EMBRYO DEFECTIVE 71, MAP KINASE KINASE KINASE 4, YODA |
-0.63 | 0.32 | -0.31 | ||
152 | AT1G19835 | Plant protein of unknown function (DUF869) | -0.63 | 0.33 | -0.31 | |||
153 | ATCG00580 | photosystem II reaction center protein E | photosystem II reaction center protein E |
-0.63 | 0.31 | -0.31 | ||
154 | AT1G24706 | THO2 | AtTHO2, EMBRYO DEFECTIVE 2793, THO2 |
-0.63 | 0.34 | -0.3 | ||
155 | AT1G79950 | RAD3-like DNA-binding helicase protein | -0.63 | 0.3 | -0.31 | |||
156 | ATCG00750 | ribosomal protein S11 | ribosomal protein S11 | -0.63 | 0.32 | -0.31 | ||
157 | AT3G03240 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.3 | -0.31 | |||
158 | AT1G66140 | zinc finger protein 4 | zinc finger protein 4 | -0.63 | 0.32 | -0.31 | ||
159 | AT5G35180 | Protein of unknown function (DUF1336) | -0.63 | 0.3 | -0.33 | |||
160 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.63 | 0.32 | -0.31 | |||
161 | AT3G55850 | Amidohydrolase family | LONG AFTER FAR-RED 3, LONG AFTER FAR-RED 3 ISOFORM 1, LAF3 ISOFORM 2 |
-0.63 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
162 | C0123 | Isoleucine | D,L-Isoleucine | L-Isoleucine | tRNA charging, isoleucine biosynthesis I (from threonine), jasmonoyl-amino acid conjugates biosynthesis I, isoleucine degradation I |
-0.89 | 0.45 | -0.44 | ||
163 | C0266 | Xylose | D-Xylose | D-Xylose | xylose degradation I | -0.79 | 0.45 | -0.44 | ||
164 | C0136 | Lactic acid | D,L-Lactic acid | Lactate | pyruvate fermentation to lactate | 0.74 | 0.47 | -0.46 | ||
165 | C0210 | Phytol | E-Phytol | Phytol | chlorophyll a degradation II, chlorophyll a degradation, phytol salvage pathway |
-0.7 | 0.45 | -0.44 |