AT2G21090 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G21090
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.32 -0.31
2 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.86 0.34 -0.31
3 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.82 0.32 -0.32
4 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.3 -0.29
5 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.33 -0.3
6 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.8 0.31 -0.32
7 AT1G06380 Ribosomal protein L1p/L10e family 0.79 0.34 -0.31
8 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.79 0.3 -0.34
9 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.77 0.31 -0.33
10 AT5G38895 RING/U-box superfamily protein -0.77 0.32 -0.32
11 AT5G49560 Putative methyltransferase family protein 0.77 0.34 -0.31
12 AT3G62310 RNA helicase family protein 0.76 0.32 -0.33
13 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.76 0.32 -0.3
14 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.76 0.35 -0.32
15 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.76 0.33 -0.34
16 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.76 0.29 -0.3
17 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.33 -0.3
18 AT1G04900 Protein of unknown function (DUF185) 0.75 0.32 -0.32
19 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.75 0.31 -0.32
20 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.31 -0.32
21 AT5G65900 DEA(D/H)-box RNA helicase family protein 0.75 0.32 -0.32
22 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 0.75 0.33 -0.33
23 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.32 -0.31
24 AT3G06780 glycine-rich protein -0.75 0.32 -0.32
25 AT4G11960 PGR5-like B PGR5-like B -0.75 0.3 -0.32
26 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 0.74 0.32 -0.31
27 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.74 0.32 -0.31
28 AT5G02310 proteolysis 6 proteolysis 6 -0.74 0.32 -0.31
29 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.74 0.29 -0.31
30 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 0.73 0.31 -0.3
31 AT1G26370 RNA helicase family protein 0.73 0.35 -0.31
32 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.73 0.31 -0.32
33 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.73 0.29 -0.32
34 AT1G76400 Ribophorin I 0.73 0.3 -0.33
35 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.73 0.33 -0.31
36 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.72 0.32 -0.3
37 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.72 0.32 -0.32
38 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.72 0.31 -0.31
39 AT5G53070 Ribosomal protein L9/RNase H1 0.72 0.3 -0.32
40 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.33 -0.32
41 AT2G35040 AICARFT/IMPCHase bienzyme family protein 0.72 0.31 -0.31
42 AT2G28590 Protein kinase superfamily protein 0.71 0.31 -0.32
43 AT1G01200 RAB GTPase homolog A3 ARABIDOPSIS RAB GTPASE HOMOLOG A3,
RAB GTPase homolog A3, RAB GTPase
homolog A3		 0.71 0.34 -0.31
44 AT5G17930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.71 0.31 -0.32
45 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.71 0.33 -0.33
46 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.71 0.33 -0.3
47 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.71 0.3 -0.32
48 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.3
49 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.71 0.32 -0.34
50 AT4G38010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.32 -0.32
51 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 0.7 0.34 -0.3
52 AT2G40600 appr-1-p processing enzyme family protein -0.7 0.33 -0.34
53 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 -0.7 0.31 -0.32
54 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 0.7 0.3 -0.3
55 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.7 0.32 -0.31
56 AT5G51280 DEAD-box protein abstrakt, putative 0.7 0.31 -0.32
57 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.3
58 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 0.7 0.3 -0.31
59 AT1G30350 Pectin lyase-like superfamily protein 0.7 0.33 -0.31
60 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.32 -0.32
61 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.69 0.3 -0.29
62 AT1G15870 Mitochondrial glycoprotein family protein 0.69 0.3 -0.32
63 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 -0.69 0.3 -0.33
64 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.32 -0.33
65 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.3 -0.33
66 AT1G74820 RmlC-like cupins superfamily protein 0.69 0.33 -0.3
67 AT2G20050 protein serine/threonine phosphatases;protein
kinases;catalytics;cAMP-dependent protein kinase
regulators;ATP binding;protein serine/threonine
phosphatases		 0.69 0.32 -0.29
68 AT5G17440 LUC7 related protein 0.69 0.31 -0.3
69 AT1G69330 RING/U-box superfamily protein 0.69 0.33 -0.31
70 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 0.69 0.33 -0.31
71 AT1G55820 Kinase-related protein of unknown function (DUF1296) 0.69 0.33 -0.3
72 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.68 0.32 -0.33
73 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.68 0.32 -0.33
74 AT3G16620 translocon outer complex protein 120 ARABIDOPSIS THALIANA TRANSLOCON
OUTER COMPLEX PROTEIN 120,
translocon outer complex protein
120		 0.68 0.3 -0.34
75 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.68 0.31 -0.31
76 AT4G25090 Riboflavin synthase-like superfamily protein 0.68 0.29 -0.3
77 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.33
78 AT5G36950 DegP protease 10 DegP protease 10 0.68 0.32 -0.32
79 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 0.68 0.31 -0.32
80 AT2G45080 cyclin p3;1 cyclin p3;1 0.68 0.31 -0.3
81 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.31
82 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 -0.68 0.31 -0.3
83 AT1G03720 Cysteine proteinases superfamily protein 0.68 0.29 -0.31
84 AT5G01200 Duplicated homeodomain-like superfamily protein -0.67 0.33 -0.31
85 AT5G66250 kinectin-related -0.67 0.3 -0.33
86 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase		 -0.67 0.3 -0.33
87 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.67 0.32 -0.32
88 AT1G01725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.31
89 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.67 0.32 -0.31
90 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.67 0.33 -0.33
91 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.67 0.32 -0.34
92 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.67 0.31 -0.34
93 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase -0.66 0.31 -0.32
94 AT2G27290 Protein of unknown function (DUF1279) -0.66 0.3 -0.3
95 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.35 -0.28
96 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.65 0.31 -0.3
97 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.65 0.32 -0.32
98 AT1G75280 NmrA-like negative transcriptional regulator family protein -0.65 0.32 -0.29
99 AT3G17800 Protein of unknown function (DUF760) -0.65 0.3 -0.33
100 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.65 0.3 -0.34
101 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.64 0.33 -0.3
102 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.64 0.28 -0.32
103 AT2G23480 transposable element gene -0.64 0.32 -0.3
104 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.64 0.31 -0.32
105 AT5G02290 Protein kinase superfamily protein NAK -0.63 0.29 -0.31
106 AT5G17260 NAC domain containing protein 86 NAC domain containing protein 86,
NAC domain containing protein 86		 -0.63 0.32 -0.33
107 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.63 0.32 -0.32
108 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.63 0.32 -0.33
109 AT4G10330 glycine-rich protein -0.63 0.3 -0.3
110 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.63 0.33 -0.31
111 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.63 0.32 -0.31
112 AT1G58430 GDSL-like Lipase/Acylhydrolase family protein RXF26 -0.62 0.33 -0.32
113 AT3G05400 Major facilitator superfamily protein -0.62 0.33 -0.31
114 AT1G56610 Protein with RNI-like/FBD-like domains -0.62 0.3 -0.32
115 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.62 0.3 -0.32
116 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.61 0.31 -0.32
117 AT5G22950 SNF7 family protein VPS24.1 -0.61 0.33 -0.32
118 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.61 0.32 -0.32
119 AT3G48880 RNI-like superfamily protein -0.61 0.33 -0.33
120 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.61 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		0.81 0.42 -0.44 C0118