AT2G21060 : COLD SHOCK DOMAIN PROTEIN 4
Query Information
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AGICode AT2G21060
Description glycine-rich protein 2B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 1 0.33 -0.3
2 ATCG00630 PSAJ PSAJ -0.69 0.32 -0.29
3 AT3G02280 Flavodoxin family protein -0.67 0.32 -0.3
4 AT1G50180 NB-ARC domain-containing disease resistance protein -0.63 0.3 -0.32
5 AT5G58190 evolutionarily conserved C-terminal region 10 evolutionarily conserved
C-terminal region 10		 0.62 0.29 -0.33
6 AT1G26820 ribonuclease 3 ribonuclease 3 0.61 0.3 -0.31
7 AT3G24480 Leucine-rich repeat (LRR) family protein -0.61 0.3 -0.32
8 AT3G50160 Plant protein of unknown function (DUF247) -0.61 0.32 -0.29
9 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.32
10 AT2G42660 Homeodomain-like superfamily protein 0.61 0.32 -0.32
11 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.61 0.32 -0.31
12 AT1G23420 Plant-specific transcription factor YABBY family protein INNER NO OUTER -0.61 0.31 -0.31
13 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.59 0.32 -0.33
14 AT1G63200 Cystatin/monellin superfamily protein -0.59 0.3 -0.29
15 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.59 0.32 -0.29
16 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.31 -0.29
17 AT4G00940 Dof-type zinc finger DNA-binding family protein 0.59 0.33 -0.32
18 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.58 0.32 -0.31
19 AT5G39640 Putative endonuclease or glycosyl hydrolase -0.58 0.32 -0.3
20 AT3G51030 thioredoxin H-type 1 ARABIDOPSIS THALIANA THIOREDOXIN
H-TYPE 1, thioredoxin H-type 1,
thioredoxin H-type 1		 0.58 0.31 -0.31
21 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 0.58 0.32 -0.31
22 AT3G07400 lipase class 3 family protein -0.58 0.31 -0.31
23 AT4G17215 Pollen Ole e 1 allergen and extensin family protein 0.58 0.32 -0.32
24 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.58 0.3 -0.29
25 AT4G00820 IQ-domain 17 IQ-domain 17 0.57 0.29 -0.32
26 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 -0.57 0.32 -0.31
27 AT5G39785 Protein of unknown function (DUF1666) -0.57 0.32 -0.31
28 AT5G56250 hapless 8 HAPLESS 8 -0.57 0.34 -0.3
29 AT5G65530 Protein kinase superfamily protein 0.57 0.33 -0.34
30 AT2G28570 unknown protein; Has 13 Blast hits to 13 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.31 -0.32
31 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 0.56 0.33 -0.33
32 AT3G42700 transposable element gene -0.56 0.33 -0.3
33 AT3G13226 regulatory protein RecX family protein -0.56 0.31 -0.3
34 AT5G25270 Ubiquitin-like superfamily protein -0.56 0.33 -0.32
35 AT2G30630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.32 -0.34
36 AT3G60940 Putative endonuclease or glycosyl hydrolase -0.56 0.32 -0.33
37 ATCG00600 PETG PETG -0.56 0.32 -0.33
38 AT1G10710 poor homologous synapsis 1 POOR HOMOLOGOUS SYNAPSIS 1 -0.56 0.3 -0.3
39 AT3G18810 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 6, proline-rich
extensin-like receptor kinase 6		 -0.56 0.29 -0.32
40 AT4G33030 sulfoquinovosyldiacylglycerol 1 sulfoquinovosyldiacylglycerol 1 -0.56 0.33 -0.32
41 AT1G59660 Nucleoporin autopeptidase 0.56 0.31 -0.32
42 AT1G50310 sugar transporter 9 SUGAR TRANSPORTER 9, sugar
transporter 9		 -0.56 0.31 -0.32
43 AT5G58500 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 5 0.56 0.32 -0.31
44 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.31 -0.33
45 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 0.55 0.32 -0.33
46 AT2G23550 methyl esterase 6 ALPHA/BETA FOLD HYDROLASE/ESTERASE
1, METHYL ESTERASE 6, methyl
esterase 6		 -0.55 0.32 -0.31
47 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 0.55 0.32 -0.3
48 AT3G44440 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.31 -0.31
49 AT4G14070 acyl-activating enzyme 15 acyl-activating enzyme 15 -0.55 0.32 -0.35
50 AT1G05030 Major facilitator superfamily protein -0.55 0.29 -0.31
51 AT1G02580 SET domain-containing protein EMBRYO DEFECTIVE 173,
FERTILIZATION INDEPENDENT SEED 1,
MEDEA, SET DOMAIN-CONTAINING
PROTEIN 5		 -0.55 0.32 -0.31
52 AT4G04460 Saposin-like aspartyl protease family protein 0.55 0.28 -0.32
53 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 TOUGH 0.55 0.3 -0.32
54 AT1G32540 lsd one like 1 lsd one like 1 -0.54 0.32 -0.29
55 AT5G50860 Protein kinase superfamily protein -0.54 0.33 -0.31
56 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10		 -0.54 0.28 -0.31
57 AT5G22590 Leucine Rich Repeat protein family 0.54 0.31 -0.31
58 AT3G50120 Plant protein of unknown function (DUF247) 0.54 0.33 -0.35
59 AT5G46730 glycine-rich protein 0.54 0.3 -0.33
60 AT4G37940 AGAMOUS-like 21 AGAMOUS-like 21 0.54 0.3 -0.33
61 AT5G52480 RNI-like superfamily protein 0.54 0.32 -0.31
62 AT4G15120 VQ motif-containing protein 0.54 0.3 -0.33
63 AT3G47390 cytidine/deoxycytidylate deaminase family protein PHOTOSENSITIVE 1 -0.54 0.32 -0.34
64 ATMG01370 hypothetical protein ORF111D -0.53 0.31 -0.31
65 AT4G11490 cysteine-rich RLK (RECEPTOR-like protein kinase) 33 cysteine-rich RLK (RECEPTOR-like
protein kinase) 33		 -0.53 0.32 -0.32
66 AT4G21310 Protein of unknown function (DUF1218) -0.53 0.33 -0.31
67 AT3G25450 transposable element gene -0.53 0.33 -0.34
68 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.53 0.31 -0.32
69 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.32 -0.32
70 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.32 -0.33
71 AT3G55480 protein affected trafficking 2 beta-subunit of adaptor protein
complex 3, protein affected
trafficking 2		 -0.53 0.33 -0.32
72 AT2G38080 Laccase/Diphenol oxidase family protein ARABIDOPSIS LACCASE-LIKE
MULTICOPPER OXIDASE 4, IRREGULAR
XYLEM 12, LACCASE 4, LACCASE-LIKE
MULTICOPPER OXIDASE 4		 0.52 0.31 -0.31
73 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.52 0.32 -0.31
74 AT1G74040 2-isopropylmalate synthase 1 2-isopropylmalate synthase 1,
SOPROPYLMALATE SYNTHASE 2, MAML-3		 -0.52 0.32 -0.31
75 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 0.52 0.32 -0.31
76 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.34 -0.34
77 AT5G34870 zinc knuckle (CCHC-type) family protein -0.52 0.34 -0.31
78 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.52 0.32 -0.3
79 AT4G23450 RING/U-box superfamily protein ABA Insensitive RING Protein 1,
AtAIRP1		 0.52 0.32 -0.31
80 AT3G09430 unknown protein; Has 17 Blast hits to 17 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.29 -0.3
81 AT2G26450 Plant invertase/pectin methylesterase inhibitor superfamily -0.51 0.3 -0.3
82 AT1G34400 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.31
83 AT1G57570 Mannose-binding lectin superfamily protein -0.51 0.31 -0.32
84 AT4G25070 unknown protein; EXPRESSED IN: cultured cell; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G48860.2); Has 14837 Blast hits to 10961 proteins
in 1163 species: Archae - 189; Bacteria - 1924; Metazoa -
7665; Fungi - 1127; Plants - 653; Viruses - 80; Other
Eukaryotes - 3199 (source: NCBI BLink).		 -0.51 0.32 -0.31
85 AT2G34880 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 maternal effect embryo arrest 27,
PKDM7C		 -0.51 0.31 -0.32
86 AT4G13190 Protein kinase superfamily protein 0.51 0.3 -0.31
87 AT5G02720 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G53490.1); Has 47 Blast hits
to 47 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.33 -0.31
88 AT5G14380 arabinogalactan protein 6 arabinogalactan protein 6 -0.51 0.33 -0.33
89 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.5 0.29 -0.32
90 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 0.5 0.31 -0.31
91 AT2G32740 galactosyltransferase 13 ARABIDOPSIS GALACTOSYLTRANSFERASE
13, galactosyltransferase 13		 0.5 0.33 -0.29
92 AT1G01760 adenosine deaminases;RNA binding;RNA binding;adenosine
deaminases		 0.5 0.31 -0.32
93 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.5 0.3 -0.32
94 AT5G58520 Protein kinase superfamily protein 0.49 0.32 -0.32
95 AT3G53450 Putative lysine decarboxylase family protein LONELY GUY 4 0.49 0.31 -0.3
96 AT4G14720 TIFY domain/Divergent CCT motif family protein PEAPOD 2, TIFY4B 0.49 0.31 -0.31
97 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein 0.49 0.33 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.7 0.48 -0.48 C0105
99 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.64 0.45 -0.46 C0012