AGICode | AT2G22440 |
Description | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G22440 | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.33 | -0.3 | |||
2 | AT4G25610 | C2H2-like zinc finger protein | 0.65 | 0.32 | -0.32 | |||
3 | AT1G49100 | Leucine-rich repeat protein kinase family protein | 0.62 | 0.32 | -0.31 | |||
4 | AT2G30690 | Protein of unknown function, DUF593 | 0.61 | 0.31 | -0.31 | |||
5 | AT1G33130 | transposable element gene | 0.61 | 0.31 | -0.31 | |||
6 | AT2G42930 | Carbohydrate-binding X8 domain superfamily protein | 0.61 | 0.29 | -0.32 | |||
7 | AT3G02270 | Trimeric LpxA-like enzyme | 0.61 | 0.32 | -0.3 | |||
8 | AT2G23160 | F-box family protein | -0.61 | 0.33 | -0.3 | |||
9 | AT2G21460 | transposable element gene | 0.6 | 0.3 | -0.31 | |||
10 | AT2G23800 | geranylgeranyl pyrophosphate synthase 2 | geranylgeranyl pyrophosphate synthase 2, GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 |
0.6 | 0.31 | -0.33 | ||
11 | AT1G61460 | S-locus protein kinase, putative | 0.59 | 0.32 | -0.31 | |||
12 | AT4G14670 | casein lytic proteinase B2 | casein lytic proteinase B2 | -0.57 | 0.32 | -0.31 | ||
13 | AT3G56300 | Cysteinyl-tRNA synthetase, class Ia family protein | -0.57 | 0.33 | -0.31 | |||
14 | AT2G02300 | phloem protein 2-B5 | phloem protein 2-B5, phloem protein 2-B5 |
0.57 | 0.34 | -0.33 | ||
15 | AT2G24370 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.57 | 0.32 | -0.32 | |||
16 | AT3G44560 | fatty acid reductase 8 | fatty acid reductase 8 | -0.56 | 0.31 | -0.28 | ||
17 | AT2G37720 | TRICHOME BIREFRINGENCE-LIKE 15 | TRICHOME BIREFRINGENCE-LIKE 15 | 0.56 | 0.32 | -0.33 | ||
18 | AT1G55390 | Cysteine/Histidine-rich C1 domain family protein | 0.55 | 0.31 | -0.3 | |||
19 | AT5G52620 | F-box associated ubiquitination effector family protein | 0.55 | 0.31 | -0.33 | |||
20 | AT3G22650 | F-box and associated interaction domains-containing protein | S-LOCUS F-BOX 61, CEGENDUO, S-LOCUS F-BOX 61 |
-0.55 | 0.34 | -0.32 | ||
21 | AT3G28170 | unknown protein; Has 2 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.32 | |||
22 | AT3G30330 | transposable element gene | 0.54 | 0.32 | -0.31 | |||
23 | AT4G23090 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.32 | -0.31 | |||
24 | AT5G09690 | magnesium transporter 7 | ARABIDOPSIS THALIANA MAGNESIUM TRANSPORTER 7, magnesium transporter 7, MRS2-7 |
-0.54 | 0.33 | -0.31 | ||
25 | AT1G68720 | tRNA arginine adenosine deaminase | ARABIDOPSIS THALIANA TRNA ADENOSINE DEAMINASE A, tRNA arginine adenosine deaminase |
-0.54 | 0.32 | -0.29 | ||
26 | AT4G09080 | Outer membrane OMP85 family protein | TRANSLOCON OUTER MEMBRANE COMPLEX 75-IV, translocon at the outer envelope membrane of chloroplasts 75-IV |
0.54 | 0.31 | -0.3 | ||
27 | AT3G12900 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.54 | 0.3 | -0.29 | |||
28 | AT4G34640 | squalene synthase 1 | ERG9, squalene synthase 1 | -0.53 | 0.32 | -0.34 | ||
29 | AT3G59390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.53 | 0.31 | -0.31 | |||
30 | AT2G32350 | Ubiquitin-like superfamily protein | -0.53 | 0.31 | -0.35 | |||
31 | AT3G21830 | SKP1-like 8 | SKP1-like 8, SKP1-like 8 | 0.53 | 0.33 | -0.32 | ||
32 | AT4G33180 | alpha/beta-Hydrolases superfamily protein | -0.52 | 0.31 | -0.33 | |||
33 | AT2G28200 | C2H2-type zinc finger family protein | -0.52 | 0.31 | -0.31 | |||
34 | AT1G08070 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 3102, ORGANELLE TRANSCRIPT PROCESSING 82 |
0.51 | 0.32 | -0.33 | ||
35 | AT3G54060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes - 84 (source: NCBI BLink). |
-0.51 | 0.3 | -0.33 | |||
36 | AT5G55060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
-0.51 | 0.31 | -0.32 | |||
37 | AT1G69040 | ACT domain repeat 4 | ACT domain repeat 4 | 0.51 | 0.35 | -0.31 | ||
38 | AT1G44224 | ECA1 gametogenesis related family protein | -0.51 | 0.3 | -0.29 | |||
39 | AT4G27670 | heat shock protein 21 | heat shock protein 21 | -0.51 | 0.32 | -0.31 | ||
40 | AT3G04270 | unknown protein; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.33 | -0.31 | |||
41 | AT3G16220 | Predicted eukaryotic LigT | -0.5 | 0.32 | -0.32 | |||
42 | AT4G12180 | transposable element gene | 0.5 | 0.32 | -0.31 | |||
43 | AT1G17615 | Disease resistance protein (TIR-NBS class) | -0.5 | 0.3 | -0.31 | |||
44 | AT3G59730 | Concanavalin A-like lectin protein kinase family protein | 0.5 | 0.3 | -0.33 | |||
45 | AT3G19085 | BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT2G26030.3); Has 310 Blast hits to 305 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 310; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.34 | -0.3 | |||
46 | AT2G24780 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.32 | -0.32 | |||
47 | AT2G24660 | transposable element gene | 0.5 | 0.33 | -0.34 | |||
48 | AT2G33870 | RAB GTPase homolog A1H | RAB GTPase homolog A1H | -0.48 | 0.34 | -0.33 | ||
49 | AT4G00650 | FRIGIDA-like protein | FLOWERING LOCUS A, FRIGIDA | -0.48 | 0.34 | -0.31 | ||
50 | AT4G21690 | gibberellin 3-oxidase 3 | ARABIDOPSIS THALIANA GIBBERELLIN 3-OXIDASE 3, gibberellin 3-oxidase 3 |
-0.48 | 0.31 | -0.32 | ||
51 | AT5G40350 | myb domain protein 24 | myb domain protein 24, myb domain protein 24 |
-0.47 | 0.29 | -0.3 |