AT2G22410 : SLOW GROWTH 1
Query Information
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AGICode AT2G22410
Description SLOW GROWTH 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 1 0.33 -0.34
2 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.81 0.32 -0.31
3 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 0.79 0.32 -0.29
4 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.77 0.31 -0.33
5 AT2G23360 Plant protein of unknown function (DUF869) 0.75 0.3 -0.34
6 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.31 -0.31
7 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.31 -0.32
8 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.74 0.33 -0.32
9 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.74 0.31 -0.32
10 AT2G11360 transposable element gene 0.72 0.31 -0.31
11 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 0.72 0.33 -0.33
12 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.72 0.32 -0.33
13 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.72 0.31 -0.31
14 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.72 0.3 -0.33
15 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.71 0.32 -0.31
16 AT1G15870 Mitochondrial glycoprotein family protein 0.71 0.32 -0.29
17 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 -0.71 0.3 -0.29
18 AT1G74820 RmlC-like cupins superfamily protein 0.71 0.3 -0.31
19 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 0.71 0.32 -0.33
20 AT5G44880 transposable element gene -0.71 0.29 -0.31
21 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO 0.7 0.32 -0.31
22 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 0.7 0.33 -0.31
23 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.7 0.31 -0.32
24 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.31
25 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 0.7 0.32 -0.31
26 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.7 0.31 -0.32
27 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.69 0.29 -0.33
28 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.69 0.33 -0.31
29 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.69 0.33 -0.32
30 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.69 0.33 -0.3
31 AT4G20400 JUMONJI 14 JUMONJI 14, PKDM7B 0.69 0.33 -0.31
32 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.69 0.32 -0.32
33 AT3G20190 Leucine-rich repeat protein kinase family protein -0.69 0.32 -0.33
34 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.33 -0.3
35 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.68 0.31 -0.3
36 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.68 0.34 -0.31
37 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.68 0.3 -0.32
38 AT1G05550 Protein of unknown function (DUF295) 0.67 0.32 -0.34
39 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.67 0.32 -0.34
40 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.67 0.33 -0.32
41 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.67 0.33 -0.3
42 AT1G68270 AMP-dependent synthetase and ligase family protein 0.67 0.3 -0.3
43 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.67 0.31 -0.33
44 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.67 0.32 -0.31
45 AT5G52860 ABC-2 type transporter family protein ATP-binding cassette G8 0.67 0.31 -0.32
46 AT3G42690 transposable element gene 0.66 0.31 -0.31
47 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.3 -0.33
48 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.66 0.31 -0.32
49 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 0.66 0.34 -0.31
50 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.66 0.33 -0.3
51 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.66 0.33 -0.33
52 AT1G64320 myosin heavy chain-related 0.66 0.32 -0.34
53 AT4G32930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF866, eukaryotic (InterPro:IPR008584);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.66 0.31 -0.29
54 AT3G30846 transposable element gene -0.66 0.31 -0.31
55 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 0.66 0.34 -0.31
56 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 -0.66 0.31 -0.29
57 AT1G32840 transposable element gene -0.66 0.32 -0.32
58 AT2G25560 DNAJ heat shock N-terminal domain-containing protein 0.65 0.29 -0.32
59 AT4G34330 Protein of unknown function (DUF677) 0.65 0.31 -0.32
60 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.65 0.32 -0.29
61 AT1G63670 Protein of unknown function (DUF3741) 0.65 0.3 -0.34
62 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.33 -0.31
63 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 0.65 0.31 -0.3
64 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.65 0.29 -0.33
65 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.65 0.31 -0.31
66 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 0.65 0.31 -0.31
67 AT2G03740 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.65 0.33 -0.34
68 AT1G51880 root hair specific 6 root hair specific 6 -0.65 0.33 -0.32
69 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.65 0.3 -0.33
70 AT1G05740 Eukaryotic protein of unknown function (DUF842) -0.64 0.31 -0.32
71 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 0.64 0.32 -0.31
72 AT4G28400 Protein phosphatase 2C family protein -0.64 0.31 -0.32
73 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.33 -0.31
74 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.64 0.33 -0.32
75 AT1G79990 structural molecules 0.64 0.3 -0.31
76 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 0.63 0.33 -0.3
77 AT2G17580 Polynucleotide adenylyltransferase family protein 0.63 0.32 -0.32
78 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.63 0.31 -0.31
79 AT1G26300 BSD domain-containing protein -0.63 0.3 -0.33
80 AT3G20280 RING/FYVE/PHD zinc finger superfamily protein 0.63 0.31 -0.32
81 AT5G47420 Tryptophan RNA-binding attenuator protein-like -0.63 0.31 -0.31
82 AT3G52760 Integral membrane Yip1 family protein -0.63 0.31 -0.32
83 AT3G04605 transposable element gene 0.63 0.31 -0.32
84 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.63 0.3 -0.33
85 AT5G43710 Glycosyl hydrolase family 47 protein 0.62 0.32 -0.34
86 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.31
87 AT2G38880 nuclear factor Y, subunit B1 HEME ACTIVATOR PROTEIN (YEAST)
HOMOLOG 3, NUCLEAR FACTOR Y
SUBUNIT B1, HEME ACTIVATOR PROTEIN
(YEAST) HOMOLOG 3, HEME ACTIVATOR
PROTEIN (YEAST) HOMOLOG 3A,
nuclear factor Y, subunit B1		 -0.62 0.32 -0.32
88 AT5G11490 adaptin family protein 0.62 0.33 -0.31
89 AT2G36480 ENTH/VHS family protein 0.62 0.32 -0.34
90 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) -0.62 0.33 -0.3
91 AT3G56740 Ubiquitin-associated (UBA) protein -0.62 0.3 -0.32
92 AT1G17410 Nucleoside diphosphate kinase family protein -0.62 0.32 -0.33
93 AT4G13160 Protein of unknown function, DUF593 -0.62 0.3 -0.34
94 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.62 0.3 -0.3
95 AT3G16610 pentatricopeptide (PPR) repeat-containing protein 0.62 0.36 -0.31
96 AT1G71830 somatic embryogenesis receptor-like kinase 1 SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 1, somatic
embryogenesis receptor-like kinase
1		 0.62 0.31 -0.33
97 AT5G66620 DA1-related protein 6 DA1-related protein 6 0.62 0.33 -0.33
98 AT3G43530 transposable element gene -0.62 0.32 -0.32
99 AT5G26700 RmlC-like cupins superfamily protein 0.62 0.31 -0.3
100 AT3G61040 cytochrome P450, family 76, subfamily C, polypeptide 7 cytochrome P450, family 76,
subfamily C, polypeptide 7		 0.62 0.34 -0.31
101 AT2G15130 Plant basic secretory protein (BSP) family protein 0.62 0.32 -0.34
102 AT4G03750 transposable element gene 0.62 0.31 -0.32
103 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.31 -0.31
104 AT3G56600 Protein kinase superfamily protein -0.61 0.31 -0.33
105 AT2G23940 Protein of unknown function (DUF788) -0.61 0.32 -0.32
106 AT4G27120 CONTAINS InterPro DOMAIN/s: DDRGK domain
(InterPro:IPR019153); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.31 -0.33
107 AT3G62160 HXXXD-type acyl-transferase family protein -0.61 0.31 -0.33
108 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 -0.61 0.32 -0.32
109 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.61 0.31 -0.3
110 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.6 0.31 -0.31
111 AT4G18720 Transcription factor IIS protein -0.6 0.32 -0.31
112 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.32 -0.33
113 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.6 0.29 -0.32
114 AT1G17790 DNA-binding bromodomain-containing protein -0.6 0.32 -0.32
115 AT3G07930 DNA glycosylase superfamily protein -0.6 0.31 -0.31
116 AT5G21060 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.59 0.28 -0.32
117 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.59 0.34 -0.3
118 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.3
119 AT3G15890 Protein kinase superfamily protein -0.59 0.3 -0.32
120 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.59 0.3 -0.33
121 AT3G11930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.59 0.32 -0.31
122 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.58 0.31 -0.32
123 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.58 0.31 -0.32
124 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.58 0.32 -0.29
125 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 -0.58 0.33 -0.32
126 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.58 0.31 -0.3
127 AT4G09950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.57 0.3 -0.32
128 AT4G16830 Hyaluronan / mRNA binding family -0.57 0.32 -0.32
129 ATMG00050 hypothetical protein ORF131 -0.57 0.31 -0.32
130 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 -0.57 0.31 -0.31
131 AT1G41820 unknown protein; Has 46 Blast hits to 46 proteins in 21
species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2;
Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source:
NCBI BLink).		 -0.57 0.34 -0.3
132 AT1G41797 transposable element gene -0.57 0.3 -0.32
133 ATMG00680 hypothetical protein ORF122C -0.57 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0198 Phosphatidylethanolamine-34:0 - - - 0.79 0.45 -0.47
135 C0145 Maltotetraose - Maltotetraose starch degradation II 0.78 0.46 -0.46 C0145
136 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.63 0.44 -0.43 C0087
137 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.58 0.45 -0.46 C0088