AT2G22390 : ATRABA4E
Query Information
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AGICode AT2G22390
Description pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E 1 0.31 -0.31
2 AT5G16760 Inositol 1,3,4-trisphosphate 5/6-kinase family protein Arabidopsis thaliana inositol
(1,3,4) P3 5/6-kinase 1, inositol
(1,3,4) P3 5/6-kinase 1		 -0.77 0.31 -0.3
3 AT2G12170 BEST Arabidopsis thaliana protein match is: Transcriptional
factor B3 family protein (TAIR:AT2G24645.1); Has 18 Blast
hits to 18 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
4 AT3G54130 Josephin family protein -0.66 0.33 -0.3
5 AT4G32390 Nucleotide-sugar transporter family protein -0.66 0.31 -0.32
6 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 -0.65 0.3 -0.32
7 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 -0.64 0.29 -0.31
8 AT2G13335 transposable element gene -0.64 0.31 -0.32
9 AT2G40260 Homeodomain-like superfamily protein 0.64 0.31 -0.31
10 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.3 -0.33
11 AT3G14160 2-oxoglutarate-dependent dioxygenase family protein -0.64 0.31 -0.32
12 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 -0.62 0.3 -0.33
13 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.32 -0.31
14 AT3G51160 NAD(P)-binding Rossmann-fold superfamily protein GDP-D-MANNOSE-4,6-DEHYDRATASE 2,
MURUS 1, MURUS 1		 -0.61 0.32 -0.34
15 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.61 0.32 -0.32
16 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 -0.61 0.33 -0.31
17 AT3G12030 Protein of unknown function DUF106, transmembrane -0.61 0.33 -0.31
18 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.61 0.32 -0.33
19 AT3G17090 Protein phosphatase 2C family protein -0.61 0.32 -0.31
20 AT3G01340 Transducin/WD40 repeat-like superfamily protein -0.6 0.33 -0.3
21 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B -0.6 0.31 -0.3
22 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.6 0.31 -0.3
23 AT5G46730 glycine-rich protein -0.6 0.32 -0.3
24 AT3G06560 poly(A) polymerase 3 poly(A) polymerase 3 -0.6 0.32 -0.31
25 AT3G44270 transposable element gene -0.59 0.32 -0.31
26 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.59 0.32 -0.33
27 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.59 0.32 -0.3
28 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b 0.57 0.33 -0.34
29 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 -0.57 0.31 -0.33
30 AT1G80245 Spc97 / Spc98 family of spindle pole body (SBP) component -0.57 0.29 -0.32
31 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 -0.57 0.31 -0.31
32 AT2G07190 Domain of unknown function (DUF1985) -0.57 0.31 -0.32
33 AT2G32600 hydroxyproline-rich glycoprotein family protein -0.57 0.31 -0.31
34 AT3G60980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.31 -0.31
35 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.57 0.32 -0.31
36 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.33 -0.33
37 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A -0.56 0.29 -0.34
38 AT3G18670 Ankyrin repeat family protein -0.56 0.32 -0.31
39 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.3 -0.3
40 AT4G15410 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 -0.56 0.31 -0.32
41 AT5G33380 transposable element gene -0.56 0.32 -0.33
42 AT5G24940 Protein phosphatase 2C family protein -0.55 0.3 -0.3
43 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.55 0.33 -0.31
44 AT5G58600 Plant protein of unknown function (DUF828) POWDERY MILDEW RESISTANT 5,
TRICHOME BIREFRINGENCE-LIKE 44		 -0.55 0.31 -0.32
45 AT1G41900 transposable element gene 0.54 0.32 -0.31
46 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.54 0.31 -0.33
47 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 0.54 0.28 -0.32
48 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.54 0.31 -0.32
49 AT2G06090 Plant self-incompatibility protein S1 family -0.54 0.31 -0.32
50 AT1G54270 eif4a-2 eif4a-2 -0.54 0.29 -0.31
51 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.53 0.31 -0.31
52 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.53 0.31 -0.33
53 AT2G47330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.53 0.29 -0.32
54 AT3G42120 transposable element gene -0.53 0.32 -0.32
55 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein 0.53 0.34 -0.29
56 AT4G27970 SLAC1 homologue 2 SLAC1 homologue 2 -0.53 0.32 -0.33
57 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.53 0.31 -0.31
58 AT5G58540 Protein kinase superfamily protein -0.52 0.31 -0.34
59 AT1G18700 DNAJ heat shock N-terminal domain-containing protein -0.52 0.29 -0.32
60 AT1G59800 Cullin family protein -0.52 0.3 -0.32
61 AT1G33680 KH domain-containing protein -0.52 0.3 -0.31
62 AT5G44760 C2 domain-containing protein -0.52 0.32 -0.29
63 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 0.52 0.33 -0.31
64 AT5G20610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits
to 759 proteins in 180 species: Archae - 6; Bacteria - 105;
Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other
Eukaryotes - 282 (source: NCBI BLink).		 -0.52 0.32 -0.31
65 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 -0.52 0.3 -0.31
66 AT5G23960 terpene synthase 21 ATTPS21, terpene synthase 21 -0.52 0.3 -0.34
67 AT2G46960 cytochrome P450, family 709, subfamily B, polypeptide 1 cytochrome P450, family 709,
subfamily B, polypeptide 1		 -0.52 0.3 -0.31
68 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.29 -0.32
69 AT1G65880 benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 0.52 0.32 -0.31
70 AT1G34270 Exostosin family protein -0.51 0.33 -0.33
71 AT4G18860 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.33 -0.31
72 AT1G21780 BTB/POZ domain-containing protein -0.51 0.32 -0.32
73 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 0.51 0.32 -0.32
74 AT5G66500 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.31 -0.31
75 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 0.51 0.3 -0.33
76 AT1G53340 Cysteine/Histidine-rich C1 domain family protein -0.51 0.31 -0.33
77 AT5G61320 cytochrome P450, family 89, subfamily A, polypeptide 3 cytochrome P450, family 89,
subfamily A, polypeptide 3		 -0.51 0.33 -0.3
78 AT2G04860 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.33 -0.31
79 AT5G12910 Histone superfamily protein 0.5 0.31 -0.31
80 AT1G06520 glycerol-3-phosphate acyltransferase 1 ATGPAT1, glycerol-3-phosphate
acyltransferase 1		 0.5 0.32 -0.32
81 AT5G64530 xylem NAC domain 1 Arabidopsis NAC domain containing
protein 104, xylem NAC domain 1		 0.49 0.32 -0.33
82 AT1G68670 myb-like transcription factor family protein 0.49 0.31 -0.34
83 AT1G64830 Eukaryotic aspartyl protease family protein 0.49 0.33 -0.32
84 AT2G13900 Cysteine/Histidine-rich C1 domain family protein 0.49 0.3 -0.31
85 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.49 0.31 -0.3
86 AT5G11400 Protein kinase superfamily protein 0.48 0.31 -0.31
87 AT5G51850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits
to 375 proteins in 79 species: Archae - 0; Bacteria - 14;
Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 0.48 0.3 -0.32
88 AT1G11730 Galactosyltransferase family protein 0.48 0.31 -0.3
89 AT1G09370 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.48 0.29 -0.34
90 AT1G62890 transposable element gene 0.47 0.3 -0.31
91 AT3G25960 Pyruvate kinase family protein 0.47 0.32 -0.33
92 AT1G52990 thioredoxin family protein 0.47 0.3 -0.3
93 AT3G58230 Ubiquitin-specific protease family C19-related protein 0.46 0.31 -0.29
94 AT1G24640 transposable element gene 0.46 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.76 0.44 -0.45 C0136
96 C0188 Nicotine (-)-Nicotine Nicotine - 0.68 0.47 -0.49 C0188