AT2G27900 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G27900
Description CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 1 0.32 -0.32
2 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.79 0.32 -0.28
3 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.78 0.34 -0.31
4 AT2G46560 transducin family protein / WD-40 repeat family protein 0.76 0.32 -0.31
5 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.75 0.31 -0.32
6 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.74 0.3 -0.33
7 AT2G21820 unknown protein; Has 45 Blast hits to 45 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.34
8 AT3G43220 Phosphoinositide phosphatase family protein 0.71 0.3 -0.31
9 AT1G79830 golgin candidate 5 golgin candidate 5 0.71 0.31 -0.31
10 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.34 -0.31
11 AT5G35180 Protein of unknown function (DUF1336) 0.71 0.33 -0.32
12 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.7 0.32 -0.32
13 AT4G27760 NAD(P)-binding Rossmann-fold superfamily protein FOREVER YOUNG, FEY3 -0.7 0.32 -0.34
14 AT4G14630 germin-like protein 9 germin-like protein 9 -0.7 0.33 -0.32
15 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.68 0.3 -0.3
16 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.68 0.3 -0.31
17 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.68 0.33 -0.32
18 AT1G09910 Rhamnogalacturonate lyase family protein 0.68 0.33 -0.34
19 AT2G17975 zinc finger (Ran-binding) family protein 0.67 0.31 -0.33
20 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.67 0.32 -0.33
21 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.67 0.3 -0.33
22 AT1G02080 transcription regulators 0.67 0.32 -0.31
23 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 -0.66 0.32 -0.33
24 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.66 0.31 -0.34
25 AT3G24070 Zinc knuckle (CCHC-type) family protein 0.66 0.33 -0.32
26 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S 0.66 0.34 -0.3
27 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.29 -0.32
28 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.66 0.3 -0.32
29 AT4G34040 RING/U-box superfamily protein 0.65 0.31 -0.29
30 AT2G44740 cyclin p4;1 cyclin p4;1 -0.65 0.31 -0.32
31 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.65 0.31 -0.32
32 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 0.65 0.32 -0.31
33 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 0.65 0.31 -0.32
34 AT5G14790 ARM repeat superfamily protein -0.65 0.3 -0.33
35 AT1G74840 Homeodomain-like superfamily protein -0.65 0.33 -0.32
36 AT2G25760 Protein kinase family protein 0.64 0.33 -0.35
37 AT1G50720 Stigma-specific Stig1 family protein -0.64 0.32 -0.34
38 AT3G49770 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.32
39 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.63 0.31 -0.3
40 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.63 0.32 -0.34
41 AT4G13030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.32 -0.28
42 AT5G04460 RING/U-box superfamily protein 0.63 0.3 -0.33
43 AT4G00040 Chalcone and stilbene synthase family protein 0.62 0.31 -0.32
44 AT3G09735 S1FA-like DNA-binding protein -0.62 0.29 -0.33
45 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.62 0.32 -0.31
46 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 -0.62 0.3 -0.31
47 AT1G22860 Vacuolar sorting protein 39 0.62 0.32 -0.33
48 AT1G08750 Peptidase C13 family -0.62 0.32 -0.33
49 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.62 0.29 -0.32
50 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.61 0.34 -0.32
51 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.61 0.3 -0.32
52 AT2G25760 Protein kinase family protein 0.61 0.34 -0.33
53 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.3 -0.33
54 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.61 0.29 -0.34
55 AT2G37650 GRAS family transcription factor 0.61 0.33 -0.3
56 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.61 0.31 -0.32
57 AT1G13910 Leucine-rich repeat (LRR) family protein 0.61 0.32 -0.32
58 AT3G12370 Ribosomal protein L10 family protein -0.61 0.32 -0.32
59 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.6 0.31 -0.3
60 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.6 0.32 -0.28
61 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.29
62 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 0.6 0.31 -0.31
63 AT3G55700 UDP-Glycosyltransferase superfamily protein -0.6 0.32 -0.34
64 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.6 0.31 -0.31
65 AT3G13360 WPP domain interacting protein 3 WPP domain interacting protein 3 -0.6 0.32 -0.31
66 AT1G42630 transposable element gene -0.59 0.32 -0.31
67 AT3G56720 unknown protein; Has 6239 Blast hits to 4635 proteins in
365 species: Archae - 6; Bacteria - 230; Metazoa - 3389;
Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes -
1286 (source: NCBI BLink).		 0.59 0.29 -0.32
68 AT2G36810 ARM repeat superfamily protein 0.59 0.31 -0.32
69 AT1G14660 Na+/H+ exchanger 8 Na+/H+ exchanger 8, Na+/H+
exchanger 8, SODIUM HYDROGEN
EXCHANGER 8		 0.59 0.33 -0.32
70 AT4G04150 transposable element gene 0.59 0.32 -0.31
71 AT5G24010 Protein kinase superfamily protein 0.59 0.32 -0.33
72 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.59 0.32 -0.31
73 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.59 0.29 -0.32
74 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.59 0.29 -0.29
75 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.58 0.33 -0.32
76 AT2G27760 tRNAisopentenyltransferase 2 tRNAisopentenyltransferase 2,
IPPT, tRNAisopentenyltransferase 2		 0.58 0.31 -0.33
77 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.58 0.32 -0.31
78 AT4G12180 transposable element gene -0.58 0.31 -0.3
79 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.58 0.29 -0.31
80 AT5G62760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.31 -0.3
81 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 0.58 0.31 -0.32
82 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.58 0.33 -0.29
83 AT2G25660 embryo defective 2410 embryo defective 2410 0.58 0.31 -0.31
84 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein -0.58 0.31 -0.29
85 AT1G10720 BSD domain-containing protein -0.58 0.3 -0.31
86 AT5G46750 ARF-GAP domain 9 ARF-GAP domain 9 -0.57 0.33 -0.3
87 AT5G60660 plasma membrane intrinsic protein 2;4 plasma membrane intrinsic protein
2;4, PIP2F		 -0.57 0.32 -0.33
88 AT2G15630 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.33 -0.31
89 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.31 -0.33
90 AT3G32060 transposable element gene -0.57 0.29 -0.32
91 AT4G07750 transposable element gene -0.56 0.34 -0.29
92 AT3G20130 cytochrome P450, family 705, subfamily A, polypeptide 22 cytochrome P450, family 705,
subfamily A, polypeptide 22,
gravity persistence signal 1		 -0.56 0.31 -0.32
93 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.56 0.31 -0.32
94 AT1G44070 transposable element gene -0.56 0.31 -0.33
95 AT5G51470 Auxin-responsive GH3 family protein -0.55 0.31 -0.33
96 AT2G22600 RNA-binding KH domain-containing protein -0.55 0.31 -0.33
97 AT4G16400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.33 -0.32
98 AT3G57370 Cyclin family protein -0.55 0.32 -0.33
99 AT5G55800 Cysteine/Histidine-rich C1 domain family protein -0.55 0.33 -0.29
100 AT5G35710 transposable element gene -0.55 0.32 -0.32