AT2G27900 : -
Query Information
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AGICode AT2G27900
Description CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 1 0.3 -0.31
2 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.78 0.3 -0.31
3 AT1G09550 Pectinacetylesterase family protein 0.69 0.33 -0.32
4 AT5G22720 F-box/RNI-like superfamily protein 0.69 0.32 -0.33
5 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 0.69 0.31 -0.32
6 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.68 0.31 -0.32
7 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.33 -0.32
8 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.68 0.31 -0.32
9 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 0.68 0.3 -0.31
10 AT1G02360 Chitinase family protein -0.68 0.3 -0.32
11 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 -0.67 0.32 -0.34
12 AT4G29390 Ribosomal protein S30 family protein -0.67 0.32 -0.3
13 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.33 -0.31
14 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.67 0.33 -0.31
15 AT5G10880 tRNA synthetase-related / tRNA ligase-related 0.67 0.29 -0.31
16 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein 0.66 0.31 -0.32
17 ATMG00400 hypothetical protein ORF157 0.66 0.31 -0.32
18 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.66 0.34 -0.3
19 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.66 0.31 -0.28
20 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.65 0.29 -0.32
21 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.65 0.32 -0.32
22 AT3G04200 RmlC-like cupins superfamily protein 0.65 0.31 -0.31
23 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 0.65 0.32 -0.31
24 AT5G35180 Protein of unknown function (DUF1336) 0.65 0.31 -0.32
25 AT1G50250 FTSH protease 1 FTSH protease 1 0.64 0.29 -0.3
26 AT1G45160 Protein kinase superfamily protein 0.64 0.33 -0.32
27 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.64 0.36 -0.32
28 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.31
29 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 0.63 0.33 -0.32
30 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 -0.63 0.33 -0.3
31 AT2G43770 Transducin/WD40 repeat-like superfamily protein -0.63 0.31 -0.32
32 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 0.63 0.33 -0.31
33 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.63 0.31 -0.32
34 AT1G30790 F-box and associated interaction domains-containing protein 0.63 0.35 -0.32
35 AT3G46360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to
4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.34 -0.32
36 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 0.63 0.3 -0.33
37 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 0.63 0.3 -0.33
38 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.62 0.31 -0.32
39 AT1G51340 MATE efflux family protein 0.62 0.32 -0.31
40 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 -0.62 0.3 -0.34
41 AT2G01280 Cyclin/Brf1-like TBP-binding protein maternal effect embryo arrest 65 0.62 0.3 -0.31
42 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.62 0.3 -0.32
43 AT2G37880 Protein of unknown function, DUF617 0.62 0.32 -0.33
44 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.61 0.32 -0.29
45 AT3G42700 transposable element gene 0.61 0.32 -0.3
46 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.61 0.32 -0.31
47 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.33 -0.33
48 AT4G11950 Protein of unknown function (DUF1191) 0.61 0.34 -0.31
49 AT3G06670 binding 0.61 0.3 -0.31
50 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.61 0.32 -0.31
51 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 0.61 0.33 -0.3
52 AT4G28760 Protein of unknown function (DUF3741) 0.6 0.33 -0.31
53 AT3G51190 Ribosomal protein L2 family 0.6 0.33 -0.32
54 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 -0.6 0.3 -0.32
55 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.6 0.31 -0.3
56 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.32
57 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.32
58 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.32 -0.33
59 AT3G26560 ATP-dependent RNA helicase, putative 0.6 0.3 -0.31
60 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.3 -0.31
61 AT3G03240 alpha/beta-Hydrolases superfamily protein 0.6 0.29 -0.33
62 AT2G27970 CDK-subunit 2 CDK-subunit 2 -0.6 0.32 -0.3
63 AT3G17920 Outer arm dynein light chain 1 protein 0.6 0.31 -0.32
64 AT3G56690 Cam interacting protein 111 Cam interacting protein 111 -0.6 0.32 -0.31
65 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 0.6 0.33 -0.3
66 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.33 -0.32
67 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.59 0.33 -0.31
68 AT5G39910 Pectin lyase-like superfamily protein 0.59 0.31 -0.33
69 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 0.59 0.31 -0.32
70 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.59 0.32 -0.31
71 AT4G19040 ENHANCED DISEASE RESISTANCE 2 ENHANCED DISEASE RESISTANCE 2 0.59 0.3 -0.32
72 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.32
73 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.59 0.33 -0.31
74 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.32 -0.31
75 AT4G22250 RING/U-box superfamily protein -0.59 0.33 -0.31
76 AT3G07400 lipase class 3 family protein 0.59 0.32 -0.3
77 AT2G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
vesicle-mediated transport, vesicle docking involved in
exocytosis; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like
protein (InterPro:IPR001619); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.59 0.31 -0.31
78 AT3G05490 ralf-like 22 ralf-like 22 -0.59 0.32 -0.3
79 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.59 0.32 -0.32
80 AT1G14750 Cyclin family protein SOLO DANCERS -0.59 0.32 -0.33
81 AT3G23770 O-Glycosyl hydrolases family 17 protein -0.59 0.32 -0.31
82 AT3G56390 BEST Arabidopsis thaliana protein match is: WRKY
DNA-binding protein 55 (TAIR:AT2G40740.2); Has 12 Blast
hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.32
83 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.31 -0.33
84 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.31
85 AT3G43100 transposable element gene 0.58 0.29 -0.32
86 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.32 -0.29
87 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 0.58 0.3 -0.29
88 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 -0.58 0.32 -0.33
89 AT1G63960 Copper transport protein family 0.58 0.3 -0.34
90 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 0.58 0.31 -0.3
91 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 0.58 0.34 -0.31
92 AT1G22860 Vacuolar sorting protein 39 0.58 0.31 -0.31
93 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 0.58 0.31 -0.33
94 AT1G03750 switch 2 CHROMATIN REMODELING 9 0.58 0.31 -0.33
95 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.58 0.32 -0.32
96 AT5G43800 transposable element gene 0.58 0.31 -0.3
97 AT1G60270 beta glucosidase 6 beta glucosidase 6 0.58 0.29 -0.33
98 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.58 0.29 -0.31
99 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.58 0.3 -0.33
100 AT1G22870 Protein kinase family protein with ARM repeat domain 0.57 0.29 -0.29
101 AT2G14380 transposable element gene -0.57 0.3 -0.33
102 AT2G17000 Mechanosensitive ion channel family protein 0.57 0.33 -0.32
103 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 0.57 0.3 -0.31
104 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.57 0.31 -0.33
105 AT3G29220 transposable element gene 0.57 0.34 -0.31
106 AT5G22790 reticulata-related 1 reticulata-related 1 -0.57 0.3 -0.33
107 AT3G43900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43910.1); Has 15 Blast hits
to 15 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.29
108 AT5G13520 peptidase M1 family protein -0.57 0.32 -0.29
109 AT1G73340 Cytochrome P450 superfamily protein -0.56 0.33 -0.33
110 AT5G38400 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.56 0.31 -0.31
111 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 -0.56 0.31 -0.32
112 AT1G23820 spermidine synthase 1 spermidine synthase 1 -0.56 0.32 -0.32
113 AT3G07990 serine carboxypeptidase-like 27 serine carboxypeptidase-like 27 -0.56 0.31 -0.31
114 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.55 0.32 -0.31
115 AT1G71380 cellulase 3 cellulase 3, ARABIDOPSIS THALIANA
GLYCOSYL HYDROLASE 9B3, cellulase
3		 -0.55 0.31 -0.32
116 AT2G13020 transposable element gene -0.55 0.3 -0.33
117 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.55 0.32 -0.31
118 AT5G48350 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.54 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.74 0.45 -0.47 C0136
120 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.72 0.44 -0.43 C0234
121 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.69 0.41 -0.45 C0099