AT2G28540 : -
Query Information
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AGICode AT2G28540
Description RNA binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.35
2 AT3G03770 Leucine-rich repeat protein kinase family protein 0.73 0.31 -0.32
3 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.71 0.31 -0.31
4 AT4G15093 catalytic LigB subunit of aromatic ring-opening dioxygenase
family		 -0.69 0.31 -0.31
5 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.67 0.33 -0.31
6 AT4G08690 Sec14p-like phosphatidylinositol transfer family protein -0.67 0.31 -0.3
7 AT2G31180 myb domain protein 14 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 14, myb domain protein 14,
MYB14AT		 -0.65 0.34 -0.33
8 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 0.64 0.33 -0.29
9 AT2G20570 GBF's pro-rich region-interacting factor 1 ARABIDOPSIS GOLDEN2-LIKE 1,
GOLDEN2-LIKE 1, GBF's pro-rich
region-interacting factor 1		 0.64 0.32 -0.3
10 AT5G07180 ERECTA-like 2 ERECTA-like 2 0.63 0.3 -0.3
11 AT4G02050 sugar transporter protein 7 sugar transporter protein 7 -0.63 0.3 -0.31
12 AT2G14900 Gibberellin-regulated family protein -0.63 0.34 -0.31
13 AT3G05920 Heavy metal transport/detoxification superfamily protein -0.62 0.3 -0.3
14 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein 0.62 0.32 -0.36
15 AT1G07280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.3
16 AT1G19200 Protein of unknown function (DUF581) -0.61 0.3 -0.29
17 AT1G16500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits
to 134 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.31
18 AT2G39810 ubiquitin-protein ligases HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.61 0.3 -0.31
19 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.6 0.3 -0.32
20 AT2G45530 RING/U-box superfamily protein 0.6 0.3 -0.31
21 AT4G23510 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.31 -0.31
22 AT4G20210 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.31 -0.32
23 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 0.6 0.33 -0.29
24 AT3G15610 Transducin/WD40 repeat-like superfamily protein -0.59 0.31 -0.32
25 AT5G13950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits
to 145 proteins in 44 species: Archae - 0; Bacteria - 2;
Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.59 0.31 -0.31
26 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 -0.58 0.31 -0.34
27 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.57 0.3 -0.29
28 ATCG00190 RNA polymerase subunit beta RNA polymerase subunit beta 0.57 0.32 -0.31
29 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 -0.57 0.32 -0.32
30 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.57 0.33 -0.34
31 AT3G27340 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
oxidation reduction; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine
dioxygenase, N-terminal (InterPro:IPR010376); Has 1035
Blast hits to 1035 proteins in 399 species: Archae - 0;
Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39;
Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).		 -0.57 0.33 -0.3
32 AT5G65120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.57 0.31 -0.33
33 AT1G33800 Protein of unknown function (DUF579) -0.56 0.31 -0.3
34 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 0.56 0.32 -0.3
35 AT3G45260 C2H2-like zinc finger protein 0.56 0.33 -0.31
36 AT1G33130 transposable element gene 0.55 0.3 -0.31
37 AT4G35240 Protein of unknown function (DUF630 and DUF632) 0.55 0.31 -0.32
38 AT1G13400 C2H2 and C2HC zinc fingers superfamily protein JAGGED-LIKE, NUBBIN 0.55 0.31 -0.34
39 AT3G19140 RING/U-box superfamily protein DAY NEUTRAL FLOWERING 0.55 0.33 -0.3
40 AT1G74510 Galactose oxidase/kelch repeat superfamily protein -0.54 0.33 -0.31
41 AT1G08310 alpha/beta-Hydrolases superfamily protein -0.54 0.3 -0.3
42 AT1G73010 phosphate starvation-induced gene 2 pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2,
pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2		 -0.54 0.29 -0.32
43 AT3G49700 1-aminocyclopropane-1-carboxylate synthase 9 1-aminocyclopropane-1-carboxylate
synthase 9, AtACS9, ETHYLENE
OVERPRODUCING 3		 -0.53 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
44 C0103 Glutaric acid - - - -0.65 0.45 -0.45