AT2G28540 : -
Query Information
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AGICode AT2G28540
Description RNA binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 1 0.34 -0.32
2 AT4G33630 Protein of unknown function (DUF3506) EXECUTER1 0.61 0.31 -0.33
3 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.61 0.33 -0.31
4 AT4G21430 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 B160 0.57 0.3 -0.33
5 AT5G40980 Protein of unknown function (DUF 3339) -0.57 0.32 -0.31
6 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 0.56 0.31 -0.33
7 AT2G37840 Protein kinase superfamily protein 0.55 0.3 -0.35
8 AT3G57170 N-acetylglucosaminyl transferase component family protein /
Gpi1 family protein		 0.55 0.33 -0.3
9 AT1G55060 ubiquitin 12 ubiquitin 12 -0.55 0.3 -0.32
10 AT5G35260 transposable element gene 0.55 0.3 -0.31
11 AT2G45460 SMAD/FHA domain-containing protein 0.54 0.31 -0.33
12 AT3G20390 endoribonuclease L-PSP family protein -0.54 0.3 -0.31
13 AT5G49610 F-box family protein 0.53 0.31 -0.32
14 AT5G59640 transposable element gene 0.53 0.32 -0.31
15 AT5G44120 RmlC-like cupins superfamily protein CRUCIFERINA, CRUCIFERINA, CRU1 0.53 0.32 -0.32
16 AT4G31900 chromatin remodeling factor, putative PICKLE RELATED 2 0.52 0.32 -0.34
17 AT5G25950 Protein of Unknown Function (DUF239) 0.52 0.3 -0.3
18 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.31 -0.3
19 AT1G60200 splicing factor PWI domain-containing protein / RNA
recognition motif (RRM)-containing protein		 0.52 0.32 -0.3
20 AT5G22900 cation/H+ exchanger 3 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 3, cation/H+ exchanger 3		 -0.51 0.33 -0.32
21 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.51 0.31 -0.3
22 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 -0.51 0.31 -0.31
23 AT3G28780 Protein of unknown function (DUF1216) 0.5 0.31 -0.31
24 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 -0.5 0.34 -0.33
25 AT5G63510 gamma carbonic anhydrase like 1 gamma carbonic anhydrase like 1 -0.5 0.32 -0.32
26 AT5G07640 RING/U-box superfamily protein 0.49 0.33 -0.31
27 AT1G34070 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein
(InterPro:IPR005162); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast
hits to 647 proteins in 29 species: Archae - 0; Bacteria -
0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.3 -0.31
28 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.3 -0.31
29 AT4G11030 AMP-dependent synthetase and ligase family protein 0.49 0.32 -0.31
30 AT4G03090 sequence-specific DNA binding;sequence-specific DNA binding
transcription factors		 0.48 0.3 -0.31
31 AT4G35725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sepal; EXPRESSED
DURING: 4 anthesis, C globular stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.47 0.3 -0.31
32 AT2G24960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits
to 509 proteins in 26 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other
Eukaryotes - 50 (source: NCBI BLink).		 0.47 0.3 -0.3
33 AT1G76780 HSP20-like chaperones superfamily protein 0.47 0.31 -0.29
34 AT1G54940 plant glycogenin-like starch initiation protein 4 plant glycogenin-like starch
initiation protein 4		 -0.46 0.31 -0.32
35 AT1G15100 RING-H2 finger A2A RING-H2 finger A2A -0.46 0.29 -0.3
36 AT5G39630 Vesicle transport v-SNARE family protein -0.46 0.3 -0.32
37 AT2G17940 Plant protein of unknown function (DUF827) 0.46 0.33 -0.3
38 AT2G46050 Pentatricopeptide repeat (PPR-like) superfamily protein -0.46 0.32 -0.32
39 AT3G16130 RHO guanyl-nucleotide exchange factor 13 ATROPGEF13, phytochrome
interacting RopGEF 2, RHO
guanyl-nucleotide exchange factor
13		 -0.46 0.3 -0.32
40 AT2G31870 Poly (ADP-ribose) glycohydrolase (PARG) poly(ADP-ribose) glycohydrolase 1,
Sanskrit for 'bright'		 0.46 0.32 -0.33
41 AT2G23960 Class I glutamine amidotransferase-like superfamily protein -0.45 0.31 -0.31
42 AT3G06020 Protein of unknown function (DUF3049) FANTASTIC FOUR 4 -0.45 0.31 -0.33
43 AT1G36240 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.45 0.32 -0.28
44 AT1G23510 unknown protein; BEST Arabidopsis thaliana protein match
is: Domain of unknown function (DUF220) (TAIR:AT1G23520.1);
Has 133 Blast hits to 120 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.44 0.3 -0.31
45 AT3G32150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32190.1); Has 67 Blast hits
to 67 proteins in 27 species: Archae - 0; Bacteria - 18;
Metazoa - 11; Fungi - 7; Plants - 18; Viruses - 1; Other
Eukaryotes - 12 (source: NCBI BLink).		 -0.43 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
46 C0168 MST_2023.2 - - - -0.67 0.46 -0.44