AT1G79040 : photosystem II subunit R
Query Information
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AGICode AT1G79040
Description photosystem II subunit R
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G79040 photosystem II subunit R photosystem II subunit R 1 0.32 -0.31
2 AT1G30380 photosystem I subunit K photosystem I subunit K 0.89 0.32 -0.31
3 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.89 0.32 -0.32
4 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.89 0.3 -0.31
5 AT4G05180 photosystem II subunit Q-2 PHOTOSYSTEM II SUBUNIT Q,
photosystem II subunit Q-2, PSII-Q		 0.88 0.31 -0.31
6 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.87 0.3 -0.33
7 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2		 0.87 0.34 -0.32
8 AT5G14260 Rubisco methyltransferase family protein 0.86 0.32 -0.32
9 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.32 -0.31
10 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.86 0.29 -0.32
11 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 0.86 0.32 -0.34
12 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.86 0.35 -0.3
13 AT3G54890 photosystem I light harvesting complex gene 1 photosystem I light harvesting
complex gene 1		 0.85 0.32 -0.32
14 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.85 0.31 -0.31
15 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.85 0.32 -0.32
16 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.84 0.32 -0.33
17 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.84 0.33 -0.32
18 AT4G09010 ascorbate peroxidase 4 ascorbate peroxidase 4, thylakoid
lumen 29		 0.84 0.29 -0.31
19 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.84 0.33 -0.32
20 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.32 -0.31
21 AT4G10300 RmlC-like cupins superfamily protein 0.84 0.31 -0.31
22 AT1G12250 Pentapeptide repeat-containing protein 0.83 0.32 -0.33
23 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.83 0.31 -0.29
24 AT5G54290 cytochrome c biogenesis protein family CcdA 0.83 0.33 -0.31
25 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.83 0.31 -0.34
26 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.83 0.32 -0.33
27 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.83 0.3 -0.31
28 AT4G12800 photosystem I subunit l photosystem I subunit l 0.83 0.3 -0.33
29 AT5G64460 Phosphoglycerate mutase family protein 0.82 0.3 -0.32
30 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.82 0.28 -0.31
31 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.82 0.33 -0.32
32 AT4G05090 Inositol monophosphatase family protein 0.82 0.31 -0.33
33 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.81 0.31 -0.32
34 AT1G43670 Inositol monophosphatase family protein Arabidopsis thaliana cytosolic
fructose-1,6-bisphosphatase,
fructose-1,6-bisphosphatase,
FRUCTOSE INSENSITIVE 1		 0.81 0.32 -0.32
35 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.81 0.31 -0.31
36 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.81 0.29 -0.3
37 AT1G10740 alpha/beta-Hydrolases superfamily protein 0.81 0.32 -0.31
38 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE 0.81 0.31 -0.3
39 AT4G28030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.8 0.31 -0.3
40 AT1G20830 multiple chloroplast division site 1 MULTIPLE CHLOROPLAST DIVISION SITE
1		 0.8 0.3 -0.32
41 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.8 0.33 -0.31
42 AT2G47400 CP12 domain-containing protein 1 CP12 DOMAIN-CONTAINING PROTEIN 1,
CP12 domain-containing protein 1		 0.8 0.28 -0.31
43 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.8 0.3 -0.32
44 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.71 0.32 -0.31
45 AT5G58210 hydroxyproline-rich glycoprotein family protein -0.68 0.3 -0.31
46 AT5G03240 polyubiquitin 3 polyubiquitin 3 -0.66 0.32 -0.31
47 AT2G26510 Xanthine/uracil permease family protein pigment defective embryo 135 -0.6 0.29 -0.3
48 AT2G35330 RING/U-box superfamily protein -0.6 0.33 -0.32
49 AT1G27770 autoinhibited Ca2+-ATPase 1 autoinhibited Ca2+-ATPase 1,
PLASTID ENVELOPE ATPASE 1		 -0.58 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.79 0.52 -0.47 C0241