AT1G79080 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G79080
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.32
2 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.81 0.32 -0.31
3 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.8 0.32 -0.32
4 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.8 0.33 -0.31
5 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.78 0.33 -0.29
6 AT1G69950 transposable element gene 0.78 0.32 -0.3
7 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 0.77 0.32 -0.32
8 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.77 0.29 -0.32
9 AT3G21110 purin 7 ATPURC, purin 7, PURIN C 0.76 0.32 -0.31
10 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.76 0.32 -0.3
11 AT3G16260 tRNAse Z4 tRNAse Z4 0.76 0.32 -0.32
12 AT3G48500 Nucleic acid-binding, OB-fold-like protein PIGMENT DEFECTIVE 312, PLASTID
TRANSCRIPTIONALLY ACTIVE 10		 0.76 0.33 -0.31
13 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 0.76 0.31 -0.32
14 AT3G17940 Galactose mutarotase-like superfamily protein -0.75 0.33 -0.32
15 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.75 0.32 -0.31
16 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.75 0.31 -0.3
17 AT2G31010 Protein kinase superfamily protein 0.75 0.32 -0.32
18 AT4G22820 A20/AN1-like zinc finger family protein -0.75 0.33 -0.3
19 AT5G52010 C2H2-like zinc finger protein 0.74 0.31 -0.32
20 AT1G71060 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.32 -0.31
21 AT3G26540 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.31
22 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.73 0.3 -0.31
23 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.33 -0.3
24 AT4G30550 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 3 -0.73 0.3 -0.33
25 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.31 -0.32
26 AT3G04470 Ankyrin repeat family protein 0.73 0.29 -0.31
27 AT3G14900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: embryo development; LOCATED IN: chloroplast;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13
growth stages; Has 17135 Blast hits to 10204 proteins in
644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536;
Fungi - 2506; Plants - 1043; Viruses - 361; Other
Eukaryotes - 5958 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3120 0.73 0.32 -0.33
28 AT3G11100 sequence-specific DNA binding transcription factors -0.72 0.33 -0.3
29 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.72 0.29 -0.32
30 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.72 0.3 -0.32
31 AT4G02680 ETO1-like 1 ETO1-like 1 0.72 0.33 -0.32
32 AT3G23570 alpha/beta-Hydrolases superfamily protein -0.72 0.3 -0.31
33 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.72 0.31 -0.33
34 AT5G15760 Ribosomal protein PSRP-3/Ycf65 0.72 0.31 -0.33
35 AT3G02060 DEAD/DEAH box helicase, putative 0.71 0.31 -0.32
36 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 0.71 0.31 -0.32
37 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.71 0.3 -0.34
38 AT2G19170 subtilisin-like serine protease 3 subtilisin-like serine protease 3 0.71 0.31 -0.32
39 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.71 0.34 -0.32
40 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.7 0.31 -0.31
41 AT4G37130 hydroxyproline-rich glycoprotein family protein 0.7 0.31 -0.3
42 AT2G47250 RNA helicase family protein 0.7 0.32 -0.32
43 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.32
44 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.68 0.32 -0.31
45 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.68 0.3 -0.33
46 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.31 -0.31
47 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain 0.68 0.34 -0.34
48 AT5G66250 kinectin-related -0.67 0.31 -0.31
49 AT2G27310 F-box family protein -0.67 0.33 -0.29
50 AT3G20260 Protein of unknown function (DUF1666) 0.67 0.32 -0.32
51 AT4G15415 Protein phosphatase 2A regulatory B subunit family protein ATB' GAMMA 0.67 0.33 -0.32
52 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.67 0.34 -0.33
53 AT1G11020 RING/FYVE/PHD zinc finger superfamily protein -0.66 0.33 -0.32
54 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 -0.65 0.31 -0.3
55 AT2G31130 unknown protein; Has 116 Blast hits to 113 proteins in 44
species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2;
Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source:
NCBI BLink).		 -0.65 0.31 -0.32
56 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.64 0.32 -0.3
57 AT5G09830 BolA-like family protein -0.64 0.3 -0.31
58 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.63 0.32 -0.32
59 AT3G19280 fucosyltransferase 11 ATFUT11, FUCT1, FUCTA,
fucosyltransferase 11		 -0.63 0.32 -0.33
60 AT4G38260 Protein of unknown function (DUF833) -0.63 0.3 -0.32
61 AT4G10100 co-factor for nitrate, reductase and xanthine dehydrogenase
7		 co-factor for nitrate, reductase
and xanthine dehydrogenase 7, SIR5		 -0.63 0.31 -0.31
62 AT1G63090 phloem protein 2-A11 phloem protein 2-A11, phloem
protein 2-A11		 -0.62 0.29 -0.33
63 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.31 -0.32
64 AT5G01940 eukaryotic translation initiation factor 2B family protein
/ eIF-2B family protein		 -0.62 0.33 -0.3
65 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 succinate dehydrogenase 7,
succinate dehydrogenase 7B		 -0.62 0.33 -0.31
66 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.62 0.31 -0.32
67 AT2G38710 AMMECR1 family -0.62 0.32 -0.32