AT1G54830 : nuclear factor Y, subunit C3
Query Information
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AGICode AT1G54830
Description nuclear factor Y, subunit C3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54830 nuclear factor Y, subunit C3 nuclear factor Y, subunit C3 1 0.32 -0.3
2 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 0.83 0.29 -0.32
3 AT1G69295 plasmodesmata callose-binding protein 4 plasmodesmata callose-binding
protein 4		 0.81 0.33 -0.3
4 AT5G09620 Octicosapeptide/Phox/Bem1p family protein 0.81 0.31 -0.34
5 AT1G71950 Proteinase inhibitor, propeptide 0.79 0.33 -0.29
6 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.78 0.31 -0.33
7 AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.76 0.34 -0.3
8 AT5G16840 binding partner of acd11 1 binding partner of acd11 1 0.76 0.33 -0.29
9 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 0.75 0.34 -0.32
10 AT5G62460 RING/FYVE/PHD zinc finger superfamily protein 0.74 0.31 -0.33
11 AT5G59680 Leucine-rich repeat protein kinase family protein -0.74 0.3 -0.31
12 AT4G17550 Major facilitator superfamily protein glycerol-3-phosphate permease 4,
glycerol-3-phosphate permease 4		 0.74 0.34 -0.32
13 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 0.73 0.31 -0.31
14 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.73 0.29 -0.33
15 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein 0.73 0.32 -0.31
16 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent 0.73 0.32 -0.33
17 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.73 0.3 -0.29
18 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.73 0.33 -0.31
19 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 0.72 0.31 -0.31
20 AT1G03970 G-box binding factor 4 G-box binding factor 4 0.72 0.33 -0.33
21 AT5G65910 BSD domain-containing protein 0.72 0.32 -0.33
22 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 0.72 0.34 -0.31
23 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.72 0.32 -0.29
24 AT1G20693 high mobility group B2 HIGH MOBILITY GROUP BETA 1, high
mobility group B2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 2		 0.71 0.32 -0.31
25 AT3G18040 MAP kinase 9 MAP kinase 9 0.71 0.32 -0.31
26 AT2G39040 Peroxidase superfamily protein -0.71 0.32 -0.32
27 AT3G01560 Protein of unknown function (DUF1421) 0.71 0.32 -0.3
28 AT2G29820 Galactose oxidase/kelch repeat superfamily protein -0.71 0.33 -0.34
29 AT3G20300 Protein of unknown function (DUF3537) 0.71 0.3 -0.32
30 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 0.71 0.31 -0.32
31 AT5G42900 cold regulated gene 27 cold regulated gene 27 0.7 0.3 -0.32
32 AT4G18700 CBL-interacting protein kinase 12 WPL4-LIKE 4, CBL-interacting
protein kinase 12, SNF1-RELATED
PROTEIN KINASE 3.9, WPL4-LIKE 4		 0.7 0.31 -0.32
33 AT5G63370 Protein kinase superfamily protein 0.7 0.32 -0.31
34 AT3G20500 purple acid phosphatase 18 PURPLE ACID PHOSPHATASE 18, purple
acid phosphatase 18		 0.7 0.31 -0.32
35 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT 0.7 0.29 -0.32
36 AT1G33970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.34 -0.33
37 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 0.7 0.31 -0.36
38 AT3G63220 Galactose oxidase/kelch repeat superfamily protein 0.7 0.32 -0.32
39 AT1G07530 SCARECROW-like 14 ARABIDOPSIS THALIANA GRAS (GAI,
RGA, SCR) 2, GRAS (GAI, RGA, SCR)
2, SCARECROW-like 14		 0.7 0.32 -0.3
40 AT2G44210 Protein of Unknown Function (DUF239) -0.7 0.32 -0.32
41 AT4G30470 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.32 -0.32
42 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.3 -0.31
43 AT2G35840 Sucrose-6F-phosphate phosphohydrolase family protein 0.7 0.29 -0.32
44 AT4G22740 glycine-rich protein 0.7 0.32 -0.3
45 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.69 0.29 -0.33
46 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.69 0.32 -0.31
47 AT4G37180 Homeodomain-like superfamily protein 0.69 0.31 -0.29
48 AT5G48290 Heavy metal transport/detoxification superfamily protein -0.69 0.31 -0.31
49 AT3G24280 small acidic protein 2 small acidic protein 2 -0.69 0.31 -0.33
50 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.3 -0.32
51 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.69 0.31 -0.34
52 AT3G26150 cytochrome P450, family 71, subfamily B, polypeptide 16 cytochrome P450, family 71,
subfamily B, polypeptide 16		 -0.68 0.3 -0.29
53 AT5G01990 Auxin efflux carrier family protein 0.68 0.33 -0.33
54 AT1G20696 high mobility group B3 high mobility group B3, NFD03,
NFD3		 0.68 0.33 -0.3
55 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 0.68 0.29 -0.31
56 AT1G71000 Chaperone DnaJ-domain superfamily protein 0.68 0.31 -0.3
57 AT3G47510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.32 -0.31
58 AT4G14390 Ankyrin repeat family protein -0.68 0.33 -0.33
59 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 0.68 0.32 -0.32
60 AT1G56300 Chaperone DnaJ-domain superfamily protein 0.68 0.32 -0.32
61 AT4G33980 BEST Arabidopsis thaliana protein match is: cold regulated
gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.32 -0.32
62 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6		 -0.68 0.31 -0.31
63 AT4G38390 root hair specific 17 root hair specific 17 -0.68 0.32 -0.31
64 AT1G15230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 26
Blast hits to 26 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.34 -0.31
65 AT1G53660 nodulin MtN21 /EamA-like transporter family protein -0.67 0.3 -0.33
66 AT5G63640 ENTH/VHS/GAT family protein 0.67 0.31 -0.32
67 AT3G25280 Major facilitator superfamily protein -0.67 0.3 -0.3
68 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.33 -0.33
69 AT3G14595 Ribosomal protein L18ae family 0.67 0.3 -0.31
70 AT1G07250 UDP-glucosyl transferase 71C4 UDP-glucosyl transferase 71C4 0.67 0.33 -0.31
71 AT3G27950 GDSL-like Lipase/Acylhydrolase superfamily protein -0.67 0.31 -0.31
72 AT1G50630 Protein of unknown function (DUF3537) 0.67 0.3 -0.28
73 AT5G45480 Protein of unknown function (DUF594) -0.67 0.31 -0.29
74 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 0.67 0.31 -0.3
75 AT4G23630 VIRB2-interacting protein 1 VIRB2-interacting protein 1,
Reticulan like protein B1		 0.66 0.32 -0.28
76 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.66 0.32 -0.32
77 AT3G47160 RING/U-box superfamily protein 0.66 0.32 -0.31
78 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.66 0.31 -0.32
79 AT3G26610 Pectin lyase-like superfamily protein -0.66 0.31 -0.32
80 AT5G60140 AP2/B3-like transcriptional factor family protein -0.66 0.32 -0.33
81 AT4G02590 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 unfertilized embryo sac 12 0.66 0.33 -0.31
82 AT1G10350 DNAJ heat shock family protein 0.66 0.31 -0.32
83 AT5G26770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.33 -0.32
84 AT5G01260 Carbohydrate-binding-like fold 0.66 0.32 -0.3
85 AT1G65220 ARM repeat superfamily protein 0.66 0.31 -0.31
86 AT3G22440 FRIGIDA-like protein 0.66 0.32 -0.32
87 AT1G48670 auxin-responsive GH3 family protein -0.65 0.34 -0.29
88 AT1G72760 Protein kinase superfamily protein 0.65 0.31 -0.32
89 AT2G42250 cytochrome P450, family 712, subfamily A, polypeptide 1 cytochrome P450, family 712,
subfamily A, polypeptide 1		 -0.65 0.32 -0.3
90 AT1G51550 Kelch repeat-containing F-box family protein 0.65 0.31 -0.32
91 AT4G37950 Rhamnogalacturonate lyase family protein -0.65 0.33 -0.29
92 AT2G27140 HSP20-like chaperones superfamily protein 0.65 0.3 -0.29
93 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.33 -0.32
94 AT1G66830 Leucine-rich repeat protein kinase family protein 0.65 0.31 -0.29
95 AT5G14420 RING domain ligase2 RING domain ligase2 0.65 0.3 -0.33
96 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.65 0.31 -0.3
97 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.65 0.31 -0.3
98 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.3 -0.32
99 AT1G31770 ATP-binding cassette 14 ATP-binding cassette G14 -0.64 0.32 -0.3
100 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 -0.64 0.3 -0.3
101 AT1G07795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits
to 38 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.29
102 AT1G06930 unknown protein; Has 4478 Blast hits to 355 proteins in 82
species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi -
125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800
(source: NCBI BLink).		 -0.64 0.3 -0.3
103 AT5G28610 BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT5G28630.1); Has 1536 Blast hits to 1202
proteins in 136 species: Archae - 0; Bacteria - 8; Metazoa
- 888; Fungi - 120; Plants - 71; Viruses - 39; Other
Eukaryotes - 410 (source: NCBI BLink).		 -0.64 0.31 -0.32
104 AT5G53520 oligopeptide transporter 8 oligopeptide transporter 8,
oligopeptide transporter 8		 -0.63 0.32 -0.32
105 AT1G19710 UDP-Glycosyltransferase superfamily protein -0.63 0.3 -0.31
106 AT3G27170 chloride channel B ATCLC-B, chloride channel B -0.63 0.32 -0.3
107 AT3G42530 transposable element gene -0.63 0.31 -0.33
108 AT4G15290 Cellulose synthase family protein ATCSLB05, CELLULOSE SYNTHASE LIKE
5, CSLB05		 -0.63 0.31 -0.3
109 AT5G37420 Family of unknown function (DUF577) -0.63 0.32 -0.33
110 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.63 0.32 -0.34
111 AT2G45080 cyclin p3;1 cyclin p3;1 -0.63 0.3 -0.33
112 AT4G10550 Subtilase family protein -0.63 0.32 -0.32
113 AT1G04600 myosin XI A ATXIA, myosin XI A -0.63 0.3 -0.31
114 AT1G45545 Plant protein of unknown function (DUF827) -0.63 0.3 -0.32
115 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 -0.62 0.32 -0.31
116 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.62 0.34 -0.32
117 AT5G08090 unknown protein; Has 13 Blast hits to 13 proteins in 8
species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.3 -0.31
118 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.3
119 AT2G40120 Protein kinase superfamily protein -0.62 0.33 -0.32
120 AT1G54730 Major facilitator superfamily protein -0.62 0.32 -0.32
121 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 -0.62 0.32 -0.3
122 AT2G05870 transposable element gene -0.62 0.31 -0.32
123 AT5G24230 Lipase class 3-related protein -0.62 0.34 -0.29
124 AT2G15260 RING/U-box superfamily protein -0.62 0.29 -0.3
125 AT2G35390 Phosphoribosyltransferase family protein -0.62 0.33 -0.33
126 AT2G23570 methyl esterase 19 ARABIDOPSIS THALIANA METHYL
ESTERASE 19, methyl esterase 19		 -0.61 0.3 -0.3
127 AT3G08750 F-box and associated interaction domains-containing protein -0.61 0.35 -0.33
128 AT1G62800 aspartate aminotransferase 4 aspartate aminotransferase 4 -0.61 0.31 -0.33
129 AT1G69210 Uncharacterised protein family UPF0090 -0.61 0.3 -0.33
130 AT1G62280 SLAC1 homologue 1 SLAC1 homologue 1 -0.61 0.3 -0.35
131 AT1G68150 WRKY DNA-binding protein 9 ATWRKY9, WRKY DNA-binding protein
9		 -0.61 0.31 -0.32
132 AT5G17340 Putative membrane lipoprotein -0.61 0.31 -0.3
133 AT2G45750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.31 -0.32
134 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.61 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.72 0.43 -0.47 C0136