AT1G22760 : poly(A) binding protein 3
Query Information
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AGICode AT1G22760
Description poly(A) binding protein 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22760 poly(A) binding protein 3 poly(A) binding protein 3 1 0.32 -0.32
2 AT3G45990 Cofilin/tropomyosin-type actin-binding protein family 0.69 0.3 -0.31
3 AT5G03390 Protein of unknown function (DUF295) 0.68 0.31 -0.3
4 AT3G44000 transposable element gene 0.66 0.29 -0.33
5 AT5G54070 heat shock transcription factor A9 ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A9, heat
shock transcription factor A9		 0.66 0.31 -0.3
6 AT1G74940 Protein of unknown function (DUF581) 0.65 0.32 -0.29
7 AT2G07660 transposable element gene 0.65 0.32 -0.31
8 AT1G76670 Nucleotide-sugar transporter family protein 0.65 0.29 -0.32
9 AT1G35030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34910.1); Has 7 Blast
hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.34 -0.31
10 AT4G24050 NAD(P)-binding Rossmann-fold superfamily protein 0.64 0.32 -0.32
11 AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.64 0.3 -0.3
12 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK 0.64 0.31 -0.31
13 AT4G32950 Protein phosphatase 2C family protein 0.64 0.34 -0.28
14 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 0.63 0.33 -0.31
15 AT4G27430 COP1-interacting protein 7 COP1-interacting protein 7 0.63 0.32 -0.32
16 AT1G28160 Integrase-type DNA-binding superfamily protein 0.63 0.33 -0.32
17 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.63 0.3 -0.32
18 AT2G47440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.31 -0.32
19 AT1G41770 transposable element gene 0.62 0.3 -0.33
20 AT4G23580 Galactose oxidase/kelch repeat superfamily protein 0.62 0.32 -0.32
21 AT3G12950 Trypsin family protein -0.61 0.32 -0.32
22 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.61 0.29 -0.3
23 AT5G45320 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: inflorescence meristem, root, flower;
EXPRESSED DURING: petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis
abundant protein, group 2 (InterPro:IPR004864); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.32
24 AT2G22050 Galactose oxidase/kelch repeat superfamily protein 0.61 0.33 -0.3
25 AT5G62070 IQ-domain 23 IQ-domain 23 0.61 0.32 -0.3
26 AT4G10780 LRR and NB-ARC domains-containing disease resistance
protein		 0.61 0.31 -0.31
27 AT2G14690 Glycosyl hydrolase superfamily protein 0.61 0.3 -0.31
28 AT1G11590 Plant invertase/pectin methylesterase inhibitor superfamily 0.6 0.31 -0.32
29 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 0.6 0.31 -0.33
30 AT4G19580 DNAJ heat shock N-terminal domain-containing protein 0.6 0.31 -0.33
31 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.6 0.29 -0.33
32 AT1G23240 Caleosin-related family protein 0.6 0.3 -0.31
33 AT2G22950 Cation transporter/ E1-E2 ATPase family protein auto-regulated Ca2+-ATPase 7 0.6 0.32 -0.32
34 AT2G27320 Protein of Unknown Function (DUF239) 0.59 0.32 -0.3
35 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.33 -0.32
36 AT1G32300 D-arabinono-1,4-lactone oxidase family protein 0.59 0.33 -0.33
37 AT5G49750 Leucine-rich repeat (LRR) family protein 0.59 0.32 -0.34
38 AT3G07190 B-cell receptor-associated protein 31-like 0.58 0.3 -0.32
39 AT3G13980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits
to 418 proteins in 98 species: Archae - 0; Bacteria - 6;
Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other
Eukaryotes - 1059 (source: NCBI BLink).		 0.58 0.32 -0.31
40 AT3G52550 BEST Arabidopsis thaliana protein match is: ovate family
protein 18 (TAIR:AT3G52540.1); Has 5496 Blast hits to 1338
proteins in 151 species: Archae - 0; Bacteria - 23; Metazoa
- 3754; Fungi - 379; Plants - 301; Viruses - 154; Other
Eukaryotes - 885 (source: NCBI BLink).		 0.58 0.31 -0.29
41 AT5G01070 RING/FYVE/PHD zinc finger superfamily protein 0.58 0.34 -0.3
42 AT2G22600 RNA-binding KH domain-containing protein 0.58 0.32 -0.31
43 AT5G57840 HXXXD-type acyl-transferase family protein -0.58 0.31 -0.32
44 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 0.58 0.31 -0.32
45 AT2G32750 Exostosin family protein 0.58 0.31 -0.3
46 AT3G14320 Zinc finger, C3HC4 type (RING finger) family protein 0.57 0.31 -0.32
47 AT2G35920 RNA helicase family protein -0.56 0.32 -0.32
48 AT2G30690 Protein of unknown function, DUF593 0.56 0.32 -0.3
49 AT1G42630 transposable element gene 0.56 0.31 -0.31
50 AT1G08135 cation/H+ exchanger 6B ATCHX6B, cation/H+ exchanger 6B 0.56 0.32 -0.3
51 AT3G28680 Serine carboxypeptidase S28 family protein 0.56 0.32 -0.31
52 AT4G14590 embryo defective 2739 embryo defective 2739 0.56 0.29 -0.33
53 AT3G45390 Concanavalin A-like lectin protein kinase family protein 0.56 0.29 -0.32
54 AT4G27890 HSP20-like chaperones superfamily protein 0.56 0.33 -0.32
55 AT3G03210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink).		 0.56 0.34 -0.31
56 AT5G11180 glutamate receptor 2.6 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.6, glutamate receptor
2.6		 0.56 0.33 -0.31
57 AT1G69780 Homeobox-leucine zipper protein family ATHB13 0.56 0.31 -0.3
58 AT5G37210 Cysteine/Histidine-rich C1 domain family protein 0.55 0.31 -0.32
59 AT5G42230 serine carboxypeptidase-like 41 serine carboxypeptidase-like 41 -0.55 0.3 -0.31
60 AT5G37710 alpha/beta-Hydrolases superfamily protein -0.55 0.31 -0.32
61 AT1G28220 purine permease 3 purine permease 3, purine permease
3		 0.55 0.31 -0.35
62 AT1G05540 Protein of unknown function (DUF295) 0.55 0.29 -0.32
63 AT5G11930 Thioredoxin superfamily protein 0.55 0.31 -0.33
64 AT5G67350 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.32 -0.31
65 AT2G44800 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.54 0.32 -0.32
66 AT4G13800 Protein of unknown function (DUF803) 0.54 0.3 -0.3
67 AT1G06250 alpha/beta-Hydrolases superfamily protein 0.54 0.32 -0.32
68 AT4G03870 transposable element gene 0.54 0.33 -0.33
69 AT2G02360 phloem protein 2-B10 phloem protein 2-B10, phloem
protein 2-B10		 0.54 0.32 -0.32
70 AT1G44085 glycine-rich protein 0.54 0.29 -0.32
71 AT1G63580 Receptor-like protein kinase-related family protein 0.54 0.31 -0.33
72 AT5G20800 transposable element gene -0.52 0.31 -0.31
73 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS -0.51 0.33 -0.31
74 AT4G26680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.5 0.33 -0.31
75 AT4G16470 Tetratricopeptide repeat (TPR)-like superfamily protein -0.49 0.33 -0.29
76 AT2G35430 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.47 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.6 0.48 -0.44 C0011
78 C0013 N2-Acetyl-Ornithine N2-Acetyl-L-ornithine N-acetyl-L-ornithine arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.47 0.32 -0.29 C0013