AT1G60230 : -
Query Information
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AGICode AT1G60230
Description Radical SAM superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G60230 Radical SAM superfamily protein 1 0.33 -0.31
2 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.93 0.35 -0.33
3 AT5G65220 Ribosomal L29 family protein 0.91 0.31 -0.3
4 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.91 0.34 -0.33
5 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.3 -0.32
6 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.9 0.33 -0.28
7 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.9 0.33 -0.31
8 AT1G06190 Rho termination factor 0.89 0.31 -0.33
9 AT1G56050 GTP-binding protein-related 0.89 0.33 -0.3
10 AT4G36390 Methylthiotransferase 0.89 0.3 -0.31
11 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.89 0.34 -0.3
12 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.89 0.33 -0.34
13 AT5G47190 Ribosomal protein L19 family protein 0.89 0.32 -0.31
14 AT4G17560 Ribosomal protein L19 family protein 0.89 0.31 -0.31
15 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.3 -0.32
16 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.89 0.31 -0.32
17 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.89 0.34 -0.29
18 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.89 0.33 -0.36
19 AT5G55220 trigger factor type chaperone family protein 0.89 0.32 -0.31
20 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.89 0.3 -0.31
21 AT2G43030 Ribosomal protein L3 family protein 0.89 0.31 -0.32
22 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.89 0.35 -0.31
23 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.89 0.33 -0.32
24 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.89 0.34 -0.31
25 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.88 0.29 -0.31
26 AT3G08740 elongation factor P (EF-P) family protein 0.88 0.31 -0.32
27 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.88 0.35 -0.3
28 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.88 0.3 -0.29
29 AT4G26370 antitermination NusB domain-containing protein 0.88 0.32 -0.32
30 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.88 0.29 -0.34
31 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.34 -0.32
32 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.3 -0.33
33 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.33 -0.32
34 AT1G36390 Co-chaperone GrpE family protein 0.87 0.3 -0.33
35 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.87 0.33 -0.34
36 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.87 0.32 -0.33
37 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.87 0.3 -0.33
38 AT2G39670 Radical SAM superfamily protein 0.87 0.32 -0.31
39 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.87 0.33 -0.31
40 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.31 -0.31
41 AT4G37510 Ribonuclease III family protein 0.87 0.3 -0.31
42 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.87 0.33 -0.29
43 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.87 0.32 -0.32
44 AT3G51140 Protein of unknown function (DUF3353) 0.87 0.31 -0.34
45 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.31 -0.32
46 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.86 0.31 -0.31
47 AT1G11430 plastid developmental protein DAG, putative 0.86 0.32 -0.31
48 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.86 0.32 -0.3
49 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.31 -0.3
50 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.86 0.31 -0.33
51 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.86 0.32 -0.3
52 AT2G24090 Ribosomal protein L35 0.86 0.32 -0.29
53 AT5G54600 Translation protein SH3-like family protein 0.86 0.31 -0.29
54 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.86 0.33 -0.33
55 AT5G48220 Aldolase-type TIM barrel family protein 0.85 0.35 -0.32
56 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.85 0.32 -0.33
57 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.85 0.3 -0.31
58 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.85 0.31 -0.32
59 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.85 0.31 -0.32
60 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.85 0.31 -0.31
61 AT3G59980 Nucleic acid-binding, OB-fold-like protein 0.85 0.32 -0.31
62 AT5G63050 embryo defective 2759 embryo defective 2759 0.85 0.31 -0.31
63 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.85 0.27 -0.32
64 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.32 -0.33
65 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.85 0.31 -0.31
66 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 -0.77 0.3 -0.32
67 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.73 0.32 -0.31
68 AT4G02360 Protein of unknown function, DUF538 -0.72 0.32 -0.33
69 AT5G38030 MATE efflux family protein -0.71 0.32 -0.32
70 AT1G66950 pleiotropic drug resistance 11 ATP-binding cassette G39,
PLEIOTROPIC DRUG RESISTANCE 11,
pleiotropic drug resistance 11		 -0.67 0.33 -0.31
71 AT1G55265 Protein of unknown function, DUF538 -0.65 0.31 -0.33