AT3G16030 : CALLUS EXPRESSION OF RBCS 101
Query Information
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AGICode AT3G16030
Description lectin protein kinase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 1 0.31 -0.33
2 AT2G43570 chitinase, putative chitinase, putative 0.78 0.34 -0.31
3 AT3G08870 Concanavalin A-like lectin protein kinase family protein 0.77 0.35 -0.32
4 AT2G39710 Eukaryotic aspartyl protease family protein 0.77 0.33 -0.34
5 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 0.73 0.33 -0.33
6 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A -0.73 0.34 -0.32
7 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.31 -0.31
8 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 -0.7 0.33 -0.3
9 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 -0.7 0.32 -0.3
10 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 -0.7 0.3 -0.33
11 AT3G57510 Pectin lyase-like superfamily protein ADPG1 -0.7 0.29 -0.32
12 AT1G12310 Calcium-binding EF-hand family protein -0.69 0.31 -0.29
13 AT4G14000 Putative methyltransferase family protein -0.69 0.32 -0.35
14 AT3G06750 hydroxyproline-rich glycoprotein family protein -0.69 0.32 -0.33
15 AT5G50000 Protein kinase superfamily protein -0.69 0.32 -0.34
16 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.69 0.3 -0.32
17 AT3G52290 IQ-domain 3 IQ-domain 3 -0.69 0.33 -0.32
18 AT3G50770 calmodulin-like 41 calmodulin-like 41 0.68 0.34 -0.29
19 AT1G10020 Protein of unknown function (DUF1005) -0.68 0.32 -0.32
20 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 0.68 0.29 -0.3
21 AT5G35360 acetyl Co-enzyme a carboxylase biotin carboxylase subunit acetyl Co-enzyme a carboxylase
biotin carboxylase subunit		 -0.68 0.32 -0.3
22 AT1G56260 unknown protein; Has 32 Blast hits to 32 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 MERISTEM DISORGANIZATION 1 -0.68 0.33 -0.34
23 AT3G47480 Calcium-binding EF-hand family protein 0.68 0.32 -0.3
24 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 -0.67 0.3 -0.31
25 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.31 -0.32
26 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.29 -0.32
27 AT4G23260 cysteine-rich RLK (RECEPTOR-like protein kinase) 18 cysteine-rich RLK (RECEPTOR-like
protein kinase) 18		 0.67 0.32 -0.33
28 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 -0.67 0.33 -0.32
29 AT5G20060 alpha/beta-Hydrolases superfamily protein -0.67 0.32 -0.3
30 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 -0.67 0.32 -0.3
31 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 -0.67 0.31 -0.29
32 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.32 -0.33
33 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 -0.67 0.33 -0.3
34 AT4G10910 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.3 -0.34
35 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 -0.66 0.32 -0.32
36 AT5G01540 lectin receptor kinase a4.1 lectin receptor kinase a4.1 0.66 0.33 -0.3
37 AT5G67340 ARM repeat superfamily protein 0.66 0.3 -0.32
38 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.66 0.29 -0.3
39 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.29
40 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein -0.66 0.32 -0.3
41 AT1G01090 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha -0.66 0.3 -0.34
42 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 -0.66 0.32 -0.3
43 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 -0.66 0.31 -0.29
44 AT3G54690 Sugar isomerase (SIS) family protein SETH3 -0.65 0.32 -0.32
45 AT4G09800 S18 ribosomal protein S18 ribosomal protein -0.65 0.31 -0.33
46 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.65 0.31 -0.3
47 AT1G24610 Rubisco methyltransferase family protein -0.65 0.32 -0.3
48 AT1G14290 sphingoid base hydroxylase 2 sphingoid base hydroxylase 2 -0.65 0.32 -0.31
49 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 0.65 0.31 -0.33
50 AT3G17210 heat stable protein 1 A. THALIANA HEAT STABLE PROTEIN 1,
heat stable protein 1		 -0.65 0.31 -0.31
51 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 0.65 0.3 -0.31
52 AT1G43710 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 embryo defective 1075 -0.65 0.31 -0.31
53 AT2G01070 Lung seven transmembrane receptor family protein -0.64 0.33 -0.31
54 AT5G64920 COP1-interacting protein 8 COP1-interacting protein 8 -0.64 0.32 -0.3
55 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 -0.64 0.32 -0.3
56 AT5G14550 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.64 0.31 -0.34
57 AT1G56500 haloacid dehalogenase-like hydrolase family protein -0.64 0.34 -0.32
58 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.3
59 AT2G02590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Putative small
multi-drug export (InterPro:IPR009577); Has 405 Blast hits
to 405 proteins in 185 species: Archae - 65; Bacteria -
295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0;
Other Eukaryotes - 22 (source: NCBI BLink).		 -0.64 0.3 -0.33
60 AT2G15680 Calcium-binding EF-hand family protein AtCML30, calmodulin-like 30 -0.64 0.32 -0.32
61 AT1G14140 Mitochondrial substrate carrier family protein -0.64 0.32 -0.32
62 AT4G21380 receptor kinase 3 receptor kinase 3, receptor kinase
3		 0.64 0.33 -0.31
63 AT5G15600 SPIRAL1-like4 SPIRAL1-like4 -0.64 0.32 -0.31
64 AT2G32720 cytochrome B5 isoform B ARABIDOPSIS CYTOCHROME B5 ISOFORM
B, B5 #4, cytochrome B5 isoform B		 -0.63 0.29 -0.32
65 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 -0.63 0.31 -0.31
66 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase -0.63 0.33 -0.31
67 AT3G58630 sequence-specific DNA binding transcription factors -0.63 0.32 -0.31
68 AT3G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.32
69 AT2G43810 Small nuclear ribonucleoprotein family protein -0.63 0.34 -0.32
70 AT5G11410 Protein kinase superfamily protein 0.63 0.32 -0.31
71 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 -0.63 0.3 -0.3
72 AT4G19810 Glycosyl hydrolase family protein with chitinase insertion
domain		 class V chitinase 0.63 0.31 -0.31
73 AT2G35880 TPX2 (targeting protein for Xklp2) protein family -0.62 0.31 -0.3
74 AT4G23700 cation/H+ exchanger 17 cation/H+ exchanger 17, cation/H+
exchanger 17		 0.62 0.32 -0.3
75 AT1G27310 nuclear transport factor 2A nuclear transport factor 2A -0.62 0.32 -0.31
76 AT4G10840 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.31
77 AT2G42900 Plant basic secretory protein (BSP) family protein -0.62 0.31 -0.35
78 AT5G36290 Uncharacterized protein family (UPF0016) -0.62 0.32 -0.31
79 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 0.62 0.32 -0.3
80 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 -0.62 0.31 -0.33
81 AT3G60420 Phosphoglycerate mutase family protein 0.62 0.33 -0.34
82 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 0.62 0.32 -0.32
83 AT2G26680 CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM
(InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins
in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0;
Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451
(source: NCBI BLink).		 -0.62 0.28 -0.31
84 AT2G39210 Major facilitator superfamily protein 0.62 0.3 -0.3
85 AT2G17880 Chaperone DnaJ-domain superfamily protein -0.62 0.28 -0.32
86 AT5G47030 ATPase, F1 complex, delta/epsilon subunit -0.62 0.32 -0.32
87 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.61 0.33 -0.31
88 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.33
89 AT1G21070 Nucleotide-sugar transporter family protein -0.61 0.31 -0.31
90 AT1G69740 Aldolase superfamily protein HEMB1 -0.61 0.32 -0.31
91 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 -0.61 0.32 -0.31
92 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.61 0.3 -0.31
93 AT5G47435 formyltetrahydrofolate deformylase, putative -0.61 0.31 -0.33
94 AT2G28890 poltergeist like 4 poltergeist like 4 0.61 0.32 -0.3
95 AT2G24020 Uncharacterised BCR, YbaB family COG0718 -0.61 0.31 -0.32
96 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 -0.61 0.31 -0.32
97 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.61 0.31 -0.31
98 AT5G03040 IQ-domain 2 IQ-domain 2 -0.61 0.31 -0.31
99 AT2G35940 BEL1-like homeodomain 1 BEL1-like homeodomain 1, embryo
sac development arrest 29		 0.61 0.31 -0.3
100 AT5G49170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.31
101 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.61 0.31 -0.29
102 AT3G52420 outer envelope membrane protein 7 OUTER ENVELOPE MEMBRANE PROTEIN 7,
outer envelope membrane protein 7		 -0.61 0.32 -0.32
103 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 -0.61 0.34 -0.31
104 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.61 0.32 -0.29
105 AT1G73680 alpha dioxygenase alpha dioxygenase 0.61 0.33 -0.3
106 AT5G26210 alfin-like 4 alfin-like 4 -0.6 0.32 -0.31
107 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.31
108 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 -0.6 0.32 -0.31
109 AT3G30730 unknown protein; Has 59 Blast hits to 59 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.3
110 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 -0.6 0.31 -0.34
111 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 -0.6 0.3 -0.32
112 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2		 -0.6 0.34 -0.33
113 AT4G04150 transposable element gene 0.6 0.31 -0.31
114 AT3G45910 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.31
115 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 0.6 0.29 -0.33
116 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 0.6 0.31 -0.31
117 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 -0.6 0.32 -0.31
118 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA -0.6 0.32 -0.32
119 AT1G43190 polypyrimidine tract-binding protein 3 polypyrimidine tract-binding
protein 3		 -0.6 0.32 -0.31
120 AT4G11350 Protein of unknown function (DUF604) 0.59 0.31 -0.34
121 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 0.59 0.33 -0.31
122 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 0.59 0.32 -0.31
123 AT1G35230 arabinogalactan protein 5 arabinogalactan protein 5 0.59 0.32 -0.31
124 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 0.59 0.29 -0.33
125 AT3G15720 Pectin lyase-like superfamily protein 0.58 0.31 -0.3
126 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 0.58 0.31 -0.33
127 AT5G49520 WRKY DNA-binding protein 48 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 48, WRKY
DNA-binding protein 48		 0.58 0.3 -0.33
128 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.57 0.31 -0.32
129 AT1G01830 ARM repeat superfamily protein 0.57 0.29 -0.3
130 AT2G31990 Exostosin family protein 0.57 0.31 -0.31
131 AT4G39830 Cupredoxin superfamily protein 0.56 0.32 -0.32
132 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.56 0.33 -0.31
133 AT1G70250 receptor serine/threonine kinase, putative 0.55 0.28 -0.32
134 AT3G22930 calmodulin-like 11 calmodulin-like 11 0.55 0.31 -0.31
135 AT1G02940 glutathione S-transferase (class phi) 5 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, glutathione S-transferase
(class phi) 5		 0.55 0.31 -0.32
136 AT4G20510 transposable element gene 0.55 0.32 -0.3
137 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.55 0.32 -0.27
138 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 0.55 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
139 C0138 Linarin - - - -0.78 0.47 -0.43
140 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II 0.63 0.45 -0.43 C0146
141 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		0.62 0.3 -0.31 C0231
142 C0143 Maltitol - - starch degradation II 0.61 0.44 -0.46
143 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		0.55 0.32 -0.33 C0254