AT1G54700 : -
Query Information
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AGICode AT1G54700
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724); BEST Arabidopsis thaliana protein match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.35 -0.32
2 AT3G30846 transposable element gene 0.72 0.31 -0.32
3 AT1G59630 F-box associated ubiquitination effector family protein 0.67 0.33 -0.34
4 AT5G03570 iron regulated 2 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 2,
FERROPORTIN 2, iron regulated 2		 -0.65 0.33 -0.33
5 AT1G60400 F-box/RNI-like superfamily protein 0.64 0.32 -0.32
6 AT1G61370 S-locus lectin protein kinase family protein -0.64 0.31 -0.32
7 AT5G12280 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.64 0.32 -0.33
8 AT2G42990 GDSL-like Lipase/Acylhydrolase superfamily protein -0.64 0.32 -0.33
9 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 0.63 0.3 -0.33
10 AT4G37220 Cold acclimation protein WCOR413 family 0.62 0.32 -0.3
11 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.34 -0.31
12 AT5G47970 Aldolase-type TIM barrel family protein -0.62 0.3 -0.3
13 AT4G11480 cysteine-rich RLK (RECEPTOR-like protein kinase) 32 cysteine-rich RLK (RECEPTOR-like
protein kinase) 32		 -0.61 0.29 -0.33
14 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 0.61 0.31 -0.3
15 AT4G08710 transposable element gene 0.61 0.3 -0.33
16 AT1G36600 transposable element gene -0.61 0.3 -0.3
17 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 -0.61 0.3 -0.32
18 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.61 0.3 -0.32
19 AT4G09540 transposable element gene 0.61 0.32 -0.33
20 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 0.6 0.3 -0.32
21 AT1G13800 Tetratricopeptide repeat (TPR)-like superfamily protein embryonic factor 19 -0.59 0.3 -0.3
22 AT1G50470 F-box associated ubiquitination effector family protein -0.59 0.33 -0.31
23 AT1G13830 Carbohydrate-binding X8 domain superfamily protein -0.59 0.32 -0.28
24 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.59 0.31 -0.32
25 AT5G44770 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.31
26 AT4G02300 Plant invertase/pectin methylesterase inhibitor superfamily -0.58 0.31 -0.3
27 AT2G15520 transposable element gene 0.58 0.29 -0.33
28 AT3G45670 Protein kinase superfamily protein -0.58 0.31 -0.31
29 AT4G07920 transposable element gene 0.58 0.33 -0.31
30 AT1G35220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 313
Blast hits to 185 proteins in 75 species: Archae - 0;
Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		 -0.58 0.32 -0.31
31 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.32 -0.31
32 AT1G55790 Domain of unknown function (DUF2431) 0.58 0.3 -0.31
33 AT2G02830 transposable element gene -0.58 0.3 -0.32
34 AT5G14950 golgi alpha-mannosidase II ATGMII, golgi alpha-mannosidase II -0.57 0.31 -0.29
35 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.3
36 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 0.57 0.32 -0.33
37 ATCG01010 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein NDHF 0.57 0.31 -0.32
38 AT1G09155 phloem protein 2-B15 phloem protein 2-B15, phloem
protein 2-B15		 0.57 0.33 -0.31
39 AT3G28770 Protein of unknown function (DUF1216) 0.57 0.31 -0.31
40 AT4G23780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits
to 49 proteins in 22 species: Archae - 0; Bacteria - 9;
Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.57 0.32 -0.31
41 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.33 -0.33
42 AT2G19630 F-box and associated interaction domains-containing protein -0.56 0.32 -0.32
43 ATCG00430 photosystem II reaction center protein G photosystem II reaction center
protein G		 0.56 0.3 -0.33
44 AT2G35580 Serine protease inhibitor (SERPIN) family protein 0.56 0.31 -0.31
45 AT5G59260 Concanavalin A-like lectin protein kinase family protein 0.56 0.31 -0.32
46 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.56 0.3 -0.32
47 AT3G48770 DNA binding;ATP binding -0.56 0.31 -0.33
48 AT3G15280 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: L mature pollen stage, 4
anthesis, petal differentiation and expansion stage; Has 36
Blast hits to 36 proteins in 15 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.32 -0.3
49 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.55 0.33 -0.33
50 AT5G16690 origin recognition complex subunit 3 ATORC3, origin recognition complex
subunit 3		 -0.55 0.34 -0.34
51 AT1G77240 AMP-dependent synthetase and ligase family protein 0.55 0.29 -0.33
52 AT3G29635 HXXXD-type acyl-transferase family protein -0.55 0.33 -0.32
53 AT3G13730 cytochrome P450, family 90, subfamily D, polypeptide 1 cytochrome P450, family 90,
subfamily D, polypeptide 1		 -0.55 0.3 -0.32
54 AT1G51910 Leucine-rich repeat protein kinase family protein 0.55 0.31 -0.3
55 AT2G20430 ROP-interactive CRIB motif-containing protein 6 ROP-interactive CRIB
motif-containing protein 6		 -0.55 0.29 -0.31
56 AT1G14760 KNOX Arabidopsis thaliana meinox KNOX Arabidopsis thaliana meinox 0.55 0.32 -0.3
57 AT3G51700 PIF1 helicase 0.54 0.32 -0.31
58 AT2G02670 pseudogene, hypothetical protein -0.54 0.3 -0.31
59 AT5G14770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.3 -0.31
60 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 -0.54 0.32 -0.3
61 AT2G32930 zinc finger nuclease 2 zinc finger nuclease 2 -0.54 0.29 -0.3
62 AT3G29640 transposable element gene 0.54 0.29 -0.3
63 AT2G05600 F-box associated ubiquitination effector family protein 0.53 0.31 -0.33
64 AT2G32900 centromere/kinetochore protein, putative (ZW10) ATZW10 -0.53 0.32 -0.32
65 AT1G64290 F-box protein-related 0.53 0.33 -0.3
66 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.53 0.32 -0.3
67 AT2G33520 unknown protein; Has 68 Blast hits to 68 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.53 0.33 -0.31
68 AT1G28220 purine permease 3 purine permease 3, purine permease
3		 0.53 0.31 -0.33
69 AT1G26320 Zinc-binding dehydrogenase family protein 0.53 0.31 -0.31
70 AT3G19070 Homeodomain-like superfamily protein -0.53 0.3 -0.31
71 AT2G30660 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.53 0.29 -0.34
72 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 -0.52 0.31 -0.31
73 AT2G03210 fucosyltransferase 2 ATFUT2, fucosyltransferase 2 0.52 0.33 -0.31
74 AT5G15480 C2H2-type zinc finger family protein 0.52 0.31 -0.29
75 AT5G14560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.3
76 AT2G33690 Late embryogenesis abundant protein, group 6 -0.52 0.29 -0.32
77 AT2G23920 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.31 -0.32
78 AT3G15250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits
to 218 proteins in 63 species: Archae - 0; Bacteria - 22;
Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other
Eukaryotes - 93 (source: NCBI BLink).		 0.52 0.31 -0.31
79 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.52 0.33 -0.29
80 ATCG00210 electron transporter, transferring electrons within
cytochrome b6/f complex of photosystem IIs		 YCF6 0.52 0.3 -0.31
81 AT1G17800 early nodulin-like protein 22 AtENODL22, early nodulin-like
protein 22		 0.51 0.33 -0.32
82 AT1G33350 Pentatricopeptide repeat (PPR) superfamily protein -0.51 0.3 -0.32
83 AT1G60995 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
Membralin (InterPro:IPR019144); Has 172 Blast hits to 170
proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa -
110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes
- 24 (source: NCBI BLink).		 -0.51 0.29 -0.32
84 AT5G25410 Protein of Unknown Function (DUF239) -0.51 0.33 -0.3
85 AT1G47885 Ribonuclease inhibitor -0.51 0.32 -0.32
86 AT4G26930 myb domain protein 97 myb domain protein 97, myb domain
protein 97		 0.51 0.32 -0.33
87 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 0.51 0.31 -0.31
88 AT5G45250 Disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 4 -0.51 0.34 -0.3
89 AT5G61280 Remorin family protein 0.51 0.34 -0.33
90 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.51 0.31 -0.3
91 AT1G53360 F-box associated ubiquitination effector family protein 0.51 0.31 -0.31
92 AT5G20170 RNA polymerase II transcription mediators -0.51 0.3 -0.35
93 AT2G16360 Ribosomal protein S25 family protein 0.5 0.33 -0.31
94 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.32
95 AT3G01240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01230.1); Has 12 Blast hits to 12 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.5 0.31 -0.31
96 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.5 0.33 -0.3
97 AT5G24550 beta glucosidase 32 beta glucosidase 32 0.5 0.3 -0.33
98 AT1G43950 auxin response factor 23 auxin response factor 23 0.5 0.3 -0.32
99 AT1G54640 F-box family protein-related 0.5 0.32 -0.3
100 AT4G25430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.5 0.33 -0.31
101 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.5 0.32 -0.31
102 AT5G25960 Protein of Unknown Function (DUF239) -0.5 0.34 -0.31
103 AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein 0.5 0.31 -0.32
104 AT2G43930 Protein kinase superfamily protein -0.5 0.32 -0.31