AT1G54640 : -
Query Information
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AGICode AT1G54640
Description F-box family protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54640 F-box family protein-related 1 0.32 -0.33
2 AT5G09390 CD2-binding protein-related 0.65 0.32 -0.31
3 AT5G11370 FBD / Leucine Rich Repeat domains containing protein 0.64 0.31 -0.31
4 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.63 0.33 -0.31
5 AT3G47660 Regulator of chromosome condensation (RCC1) family protein 0.62 0.31 -0.32
6 AT1G19170 Pectin lyase-like superfamily protein -0.62 0.31 -0.33
7 AT5G63740 RING/U-box superfamily protein 0.61 0.33 -0.3
8 AT5G26100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.29 -0.34
9 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.6 0.31 -0.3
10 AT2G14590 transposable element gene -0.59 0.33 -0.33
11 AT2G05960 transposable element gene 0.58 0.32 -0.32
12 AT1G04700 PB1 domain-containing protein tyrosine kinase 0.58 0.31 -0.34
13 AT5G20800 transposable element gene -0.57 0.32 -0.29
14 AT3G57210 Protein of unknown function (DUF626) 0.57 0.34 -0.3
15 AT2G06500 hAT family dimerisation domain 0.57 0.32 -0.35
16 AT5G18370 Disease resistance protein (TIR-NBS-LRR class) family 0.57 0.31 -0.3
17 AT3G57140 sugar-dependent 1-like sugar-dependent 1-like 0.56 0.32 -0.32
18 AT3G15130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.56 0.3 -0.3
19 AT1G73690 cyclin-dependent kinase D1;1 CYCLIN-DEPENDENT KINASE D1,
CAK3AT, cyclin-dependent kinase
D1;1		 0.56 0.32 -0.32
20 AT3G59460 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.31 -0.31
21 AT3G25490 Protein kinase family protein -0.55 0.33 -0.33
22 AT1G43950 auxin response factor 23 auxin response factor 23 0.55 0.3 -0.33
23 AT3G02970 EXORDIUM like 6 EXORDIUM like 6 0.55 0.31 -0.31
24 AT3G23850 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.3
25 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 0.55 0.31 -0.33
26 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.54 0.33 -0.31
27 AT5G38760 Late embryogenesis abundant protein (LEA) family protein -0.54 0.33 -0.32
28 AT4G13800 Protein of unknown function (DUF803) 0.54 0.31 -0.33
29 AT2G07740 transposable element gene -0.54 0.3 -0.32
30 AT1G65670 cytochrome P450, family 702, subfamily A, polypeptide 1 cytochrome P450, family 702,
subfamily A, polypeptide 1		 -0.54 0.32 -0.29
31 AT4G24890 purple acid phosphatase 24 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 24, purple acid
phosphatase 24		 0.54 0.32 -0.3
32 AT1G69660 TRAF-like family protein 0.54 0.32 -0.32
33 AT5G50940 RNA-binding KH domain-containing protein 0.53 0.31 -0.3
34 AT3G27730 ATP binding;ATP-dependent helicases;DNA helicases MER3, ROCK-N-ROLLERS 0.53 0.32 -0.3
35 AT1G43715 transposable element gene 0.53 0.3 -0.32
36 AT5G16610 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.53 0.3 -0.32
37 AT5G04500 glycosyltransferase family protein 47 -0.52 0.32 -0.31
38 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 0.52 0.31 -0.33
39 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.33 -0.32
40 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS -0.51 0.32 -0.31
41 AT4G30070 low-molecular-weight cysteine-rich 59 low-molecular-weight cysteine-rich
59		 -0.51 0.32 -0.33
42 AT1G35663 transposable element gene 0.51 0.31 -0.3
43 AT5G66020 Phosphoinositide phosphatase family protein SUPPRESSOR OF ACTIN 1B, SAC
DOMAIN-CONTAINING PROTEIN 6,
IMPAIRED IN BABA-INDUCED STERILITY
2, SUPPRESSOR OF ACTIN 1B		 -0.5 0.31 -0.33
44 AT3G28345 ABC transporter family protein ATP-binding cassette B15,
multi-drug resistance 13		 0.5 0.31 -0.32
45 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.31 -0.31
46 AT5G34840 transposable element gene 0.5 0.33 -0.33
47 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain -0.5 0.33 -0.31
48 AT1G13800 Tetratricopeptide repeat (TPR)-like superfamily protein embryonic factor 19 -0.5 0.32 -0.3
49 AT5G51610 Ribosomal protein L11 family protein -0.5 0.3 -0.33
50 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.5 0.32 -0.32
51 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 -0.5 0.31 -0.32
52 AT5G01980 RING/U-box superfamily protein 0.49 0.33 -0.31
53 AT1G11590 Plant invertase/pectin methylesterase inhibitor superfamily 0.49 0.31 -0.32
54 AT2G34830 WRKY DNA-binding protein 35 WRKY DNA-BINDING PROTEIN 35,
maternal effect embryo arrest 24,
WRKY DNA-binding protein 35		 0.49 0.29 -0.32
55 AT5G16570 glutamine synthetase 1;4 glutamine synthetase 1;4 0.48 0.3 -0.29
56 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 -0.48 0.32 -0.31
57 AT5G59810 Subtilase family protein ATSBT5.4, SBT5.4 0.48 0.31 -0.3
58 AT1G28220 purine permease 3 purine permease 3, purine permease
3		 0.48 0.31 -0.31
59 AT5G63280 C2H2-like zinc finger protein -0.48 0.31 -0.32
60 AT2G28640 exocyst subunit exo70 family protein H5 exocyst subunit exo70 family
protein H5, exocyst subunit exo70
family protein H5		 0.48 0.31 -0.32
61 AT3G30396 transposable element gene 0.48 0.3 -0.3
62 AT5G38040 UDP-Glycosyltransferase superfamily protein -0.48 0.3 -0.31
63 AT2G38500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.47 0.32 -0.33
64 AT5G39650 Protein of unknown function (DUF679) DUO1-activated unknown 2 -0.47 0.32 -0.33
65 AT3G03180 Got1/Sft2-like vescicle transport protein family -0.47 0.31 -0.34
66 AT3G27470 Protein of unknown function (DUF707) -0.46 0.3 -0.32
67 AT2G13350 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.46 0.33 -0.33
68 AT1G27220 paired amphipathic helix repeat-containing protein -0.46 0.31 -0.32
69 AT4G25020 D111/G-patch domain-containing protein -0.46 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0173 MST_2301.7 - - - 0.71 0.48 -0.44
71 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.7 0.47 -0.47 C0252
72 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.69 0.43 -0.44 C0001
73 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis 0.66 0.45 -0.45 C0240
74 C0185 MST_3139.9 - - - -0.63 0.46 -0.46
75 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis 		0.48 0.33 -0.34 C0139